RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 IFFO2Q5TF58 517 aa24.18■■□□□ 1.46
SREBF1-206ENST00000423161 ZNF541Q9H0D2 1346 aa24.17■■□□□ 1.46
SREBF1-206ENST00000423161 HOXA10P31260 410 aaPredicted RBP24.17■■□□□ 1.46
SREBF1-206ENST00000423161 IARSP41252 1262 aaKnown RBP24.17■■□□□ 1.46
SREBF1-206ENST00000423161 SYNE4Q8N205 404 aa24.17■■□□□ 1.46
SREBF1-206ENST00000423161 L3MBTL3Q96JM7 780 aaPredicted RBP24.17■■□□□ 1.46
SREBF1-206ENST00000423161 ADAMTS8Q9UP79 889 aa24.17■■□□□ 1.46
SREBF1-206ENST00000423161 TRIM35Q9UPQ4 493 aa24.17■■□□□ 1.46
SREBF1-206ENST00000423161 LAS1LQ9Y4W2 734 aaKnown RBP24.17■■□□□ 1.46
SREBF1-206ENST00000423161 IQCA1LA6NCM1 817 aa24.16■■□□□ 1.46
SREBF1-206ENST00000423161 CHL1O00533 1208 aa24.16■■□□□ 1.46
SREBF1-206ENST00000423161 KRT24Q2M2I5 525 aa24.16■■□□□ 1.46
SREBF1-206ENST00000423161 CC2D2BQ6DHV5 1058 aa24.16■■□□□ 1.46
SREBF1-206ENST00000423161 JMYQ8N9B5 988 aa24.16■■□□□ 1.46
SREBF1-206ENST00000423161 PSMD1Q99460 953 aa24.16■■□□□ 1.46
SREBF1-206ENST00000423161 POTEIP0CG38 1075 aa24.15■■□□□ 1.46
SREBF1-206ENST00000423161 POTEJP0CG39 1038 aa24.15■■□□□ 1.46
SREBF1-206ENST00000423161 AIMP1Q12904 312 aaKnown RBP24.15■■□□□ 1.46
SREBF1-206ENST00000423161 CHADLQ6NUI6 762 aa24.15■■□□□ 1.46
SREBF1-206ENST00000423161 RBM17Q96I25 401 aaKnown RBP24.15■■□□□ 1.46
SREBF1-206ENST00000423161 C3orf67Q6ZVT6 689 aa24.14■■□□□ 1.45
SREBF1-206ENST00000423161 COPS6Q7L5N1 327 aa24.14■■□□□ 1.45
SREBF1-206ENST00000423161 XAGE3Q8WTP9 111 aa24.14■■□□□ 1.45
SREBF1-206ENST00000423161 CRAMP1Q96RY5 1269 aa24.14■■□□□ 1.45
SREBF1-206ENST00000423161 UTP14AQ9BVJ6 771 aaKnown RBP24.14■■□□□ 1.45
SREBF1-206ENST00000423161 PRKRIP1Q9H875 184 aaPredicted RBP24.14■■□□□ 1.45
SREBF1-206ENST00000423161 PPEF1O14829 653 aaPredicted RBP24.13■■□□□ 1.45
SREBF1-206ENST00000423161 NLRP3Q96P20 1036 aa24.13■■□□□ 1.45
SREBF1-206ENST00000423161 DDX21Q9NR30 783 aaKnown RBP eCLIP24.13■■□□□ 1.45
SREBF1-206ENST00000423161 FZD9O00144 591 aa24.12■■□□□ 1.45
SREBF1-206ENST00000423161 HSP90AB3PQ58FF7 597 aa24.12■■□□□ 1.45
SREBF1-206ENST00000423161 TAF1DQ9H5J8 278 aaPredicted RBP24.12■■□□□ 1.45
SREBF1-206ENST00000423161 COL4A5P29400 1685 aa24.11■■□□□ 1.45
SREBF1-206ENST00000423161 RNF123Q5XPI4 1314 aa24.11■■□□□ 1.45
SREBF1-206ENST00000423161 JDP2Q8WYK2 163 aa24.11■■□□□ 1.45
SREBF1-206ENST00000423161 TCERG1O14776 1098 aaKnown RBP24.1■■□□□ 1.45
SREBF1-206ENST00000423161 GRIPAP1Q4V328 841 aa24.1■■□□□ 1.45
SREBF1-206ENST00000423161 SLC10A5Q5PT55 438 aa24.1■■□□□ 1.45
SREBF1-206ENST00000423161 SLC51AQ86UW1 340 aa24.1■■□□□ 1.45
SREBF1-206ENST00000423161 LDHDQ86WU2 507 aa24.1■■□□□ 1.45
SREBF1-206ENST00000423161 CHPF2Q9P2E5 772 aa24.1■■□□□ 1.45
SREBF1-206ENST00000423161 ADAMTSL1Q8N6G6 1762 aa24.1■■□□□ 1.45
SREBF1-206ENST00000423161 TAF1P21675 1872 aa24.09■■□□□ 1.45
SREBF1-206ENST00000423161 HDGFL1Q5TGJ6 251 aa24.09■■□□□ 1.45
SREBF1-206ENST00000423161 NLRP10Q86W26 655 aa24.09■■□□□ 1.45
SREBF1-206ENST00000423161 HACL1Q9UJ83 578 aa24.09■■□□□ 1.45
SREBF1-206ENST00000423161 HOXB7P09629 217 aa24.08■■□□□ 1.45
SREBF1-206ENST00000423161 TCIRG1Q13488 830 aa24.08■■□□□ 1.45
SREBF1-206ENST00000423161 EAPPQ56P03 285 aaPredicted RBP24.08■■□□□ 1.45
SREBF1-206ENST00000423161 DDX60Q8IY21 1712 aaKnown RBP24.07■■□□□ 1.44
SREBF1-206ENST00000423161 GPC2Q8N158 579 aa24.07■■□□□ 1.44
SREBF1-206ENST00000423161 CFAP44Q96MT7 982 aa24.07■■□□□ 1.44
SREBF1-206ENST00000423161 ABCC4O15439 1325 aa24.07■■□□□ 1.44
SREBF1-206ENST00000423161 EPHX2P34913 555 aa24.06■■□□□ 1.44
SREBF1-206ENST00000423161 EIF6P56537 245 aaKnown RBP24.06■■□□□ 1.44
SREBF1-206ENST00000423161 LARGE2Q8N3Y3 721 aa24.06■■□□□ 1.44
SREBF1-206ENST00000423161 TMX4Q9H1E5 349 aaPredicted RBP24.06■■□□□ 1.44
SREBF1-206ENST00000423161 TRMT112Q9UI30 125 aaKnown RBP24.06■■□□□ 1.44
SREBF1-206ENST00000423161 HCLS1P14317 486 aaPredicted RBP24.05■■□□□ 1.44
SREBF1-206ENST00000423161 CREBZFQ9NS37 354 aa24.05■■□□□ 1.44
SREBF1-206ENST00000423161 MBIPQ9NS73 344 aa24.05■■□□□ 1.44
SREBF1-206ENST00000423161 DBF4Q9UBU7 674 aaPredicted RBP24.05■■□□□ 1.44
SREBF1-206ENST00000423161 ATP6V0A2Q9Y487 856 aa24.05■■□□□ 1.44
SREBF1-206ENST00000423161 SH3TC1Q8TE82 1336 aa24.05■■□□□ 1.44
SREBF1-206ENST00000423161 PCNTO95613 3336 aa24.04■■□□□ 1.44
SREBF1-206ENST00000423161 DUSP27Q5VZP5 1158 aa24.04■■□□□ 1.44
SREBF1-206ENST00000423161 PLBD2Q8NHP8 589 aa24.04■■□□□ 1.44
SREBF1-206ENST00000423161 GJA3Q9Y6H8 435 aa24.04■■□□□ 1.44
SREBF1-206ENST00000423161 LTBP1Q14766 1721 aa24.04■■□□□ 1.44
SREBF1-206ENST00000423161 APAF1O14727 1248 aa24.03■■□□□ 1.44
SREBF1-206ENST00000423161 CLEC11AQ9Y240 323 aa24.03■■□□□ 1.44
SREBF1-206ENST00000423161 PASKQ96RG2 1323 aa24.03■■□□□ 1.44
SREBF1-206ENST00000423161 ANKRD13DQ6ZTN6 518 aa24.02■■□□□ 1.44
SREBF1-206ENST00000423161 PNMA8AQ86V59 439 aaPredicted RBP24.02■■□□□ 1.44
SREBF1-206ENST00000423161 NIM1KQ8IY84 436 aa24.02■■□□□ 1.44
SREBF1-206ENST00000423161 ZNF428Q96B54 188 aa24.02■■□□□ 1.44
SREBF1-206ENST00000423161 PPIP5K2O43314 1243 aa24.01■■□□□ 1.43
SREBF1-206ENST00000423161 ZNF853P0CG23 659 aa24.01■■□□□ 1.43
SREBF1-206ENST00000423161 HYPKQ9NX55 129 aa24.01■■□□□ 1.43
SREBF1-206ENST00000423161 LRRC37AA6NMS7 1700 aa24.01■■□□□ 1.43
SREBF1-206ENST00000423161 BBOX1O75936 387 aa24■■□□□ 1.43
SREBF1-206ENST00000423161 AOC3Q16853 763 aa24■■□□□ 1.43
SREBF1-206ENST00000423161 DDX46Q7L014 1031 aaKnown RBP24■■□□□ 1.43
SREBF1-206ENST00000423161 MKRN1Q9UHC7 482 aaKnown RBP24■■□□□ 1.43
SREBF1-206ENST00000423161 ITGBL1O95965 494 aaPredicted RBP23.99■■□□□ 1.43
SREBF1-206ENST00000423161 LMOD1P29536 600 aaPredicted RBP23.99■■□□□ 1.43
SREBF1-206ENST00000423161 CALD1Q05682 793 aaKnown RBP23.99■■□□□ 1.43
SREBF1-206ENST00000423161 SUPT20HQ8NEM7 779 aa23.99■■□□□ 1.43
SREBF1-206ENST00000423161 IFT57Q9NWB7 429 aa23.99■■□□□ 1.43
SREBF1-206ENST00000423161 GNAI1P63096 354 aa23.98■■□□□ 1.43
SREBF1-206ENST00000423161 GRAPQ13588 217 aa23.98■■□□□ 1.43
SREBF1-206ENST00000423161 DPP8Q6V1X1 898 aaPredicted RBP23.98■■□□□ 1.43
SREBF1-206ENST00000423161 SP8Q8IXZ3 490 aa23.98■■□□□ 1.43
SREBF1-206ENST00000423161 GRAPLQ8TC17 118 aaPredicted RBP23.98■■□□□ 1.43
SREBF1-206ENST00000423161 ISCA1Q9BUE6 129 aa23.98■■□□□ 1.43
SREBF1-206ENST00000423161 VPS33BQ9H267 617 aa23.98■■□□□ 1.43
SREBF1-206ENST00000423161 ATP5J2-PTCD1G3V325 749 aa23.97■■□□□ 1.43
SREBF1-206ENST00000423161 HSPA1AP0DMV8 641 aaKnown RBP23.97■■□□□ 1.43
SREBF1-206ENST00000423161 HSPA1BP0DMV9 641 aaKnown RBP23.97■■□□□ 1.43
SREBF1-206ENST00000423161 MPNDQ8N594 471 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms