RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TAOK3Q9H2K8 898 aa14.44□□□□□ -0.1
SSBP3-206ENST00000420121 DDX60Q8IY21 1712 aaKnown RBP14.44□□□□□ -0.1
SSBP3-206ENST00000420121 POTECB2RU33 542 aa14.43□□□□□ -0.1
SSBP3-206ENST00000420121 C3orf67Q6ZVT6 689 aa14.43□□□□□ -0.1
SSBP3-206ENST00000420121 COPS6Q7L5N1 327 aa14.43□□□□□ -0.1
SSBP3-206ENST00000420121 RBM46Q8TBY0 533 aaKnown RBP14.43□□□□□ -0.1
SSBP3-206ENST00000420121 XAGE3Q8WTP9 111 aa14.43□□□□□ -0.1
SSBP3-206ENST00000420121 DDX21Q9NR30 783 aaKnown RBP eCLIP14.43□□□□□ -0.1
SSBP3-206ENST00000420121 MBIPQ9NS73 344 aa14.43□□□□□ -0.1
SSBP3-206ENST00000420121 LAS1LQ9Y4W2 734 aaKnown RBP14.43□□□□□ -0.1
SSBP3-206ENST00000420121 TAF1P21675 1872 aa14.42□□□□□ -0.1
SSBP3-206ENST00000420121 HOXB7P09629 217 aa14.42□□□□□ -0.1
SSBP3-206ENST00000420121 HOXA10P31260 410 aaPredicted RBP14.42□□□□□ -0.1
SSBP3-206ENST00000420121 SOGA3Q5TF21 947 aa14.42□□□□□ -0.1
SSBP3-206ENST00000420121 SLC51AQ86UW1 340 aa14.42□□□□□ -0.1
SSBP3-206ENST00000420121 CHPF2Q9P2E5 772 aa14.42□□□□□ -0.1
SSBP3-206ENST00000420121 GTF2E1P29083 439 aaPredicted RBP14.41□□□□□ -0.1
SSBP3-206ENST00000420121 CCDC93Q567U6 631 aa14.41□□□□□ -0.1
SSBP3-206ENST00000420121 COL4A5P29400 1685 aa14.41□□□□□ -0.1
SSBP3-206ENST00000420121 ALDH1B1P30837 517 aa14.4□□□□□ -0.1
SSBP3-206ENST00000420121 AIMP1Q12904 312 aaKnown RBP14.4□□□□□ -0.1
SSBP3-206ENST00000420121 PARP10Q53GL7 1025 aa14.4□□□□□ -0.1
SSBP3-206ENST00000420121 SLC10A5Q5PT55 438 aa14.4□□□□□ -0.1
SSBP3-206ENST00000420121 HDGFL1Q5TGJ6 251 aa14.4□□□□□ -0.1
SSBP3-206ENST00000420121 DUSP27Q5VZP5 1158 aa14.4□□□□□ -0.1
SSBP3-206ENST00000420121 SCN4AP35499 1836 aa14.39□□□□□ -0.11
SSBP3-206ENST00000420121 FKBP4Q02790 459 aaKnown RBP eCLIP14.39□□□□□ -0.11
SSBP3-206ENST00000420121 PPP1R42Q7Z4L9 355 aa14.39□□□□□ -0.11
SSBP3-206ENST00000420121 NLRP10Q86W26 655 aa14.39□□□□□ -0.11
SSBP3-206ENST00000420121 IFT57Q9NWB7 429 aa14.39□□□□□ -0.11
SSBP3-206ENST00000420121 ZNF316A6NFI3 1004 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-206ENST00000420121 VEGFAP15692 232 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-206ENST00000420121 TCIRG1Q13488 830 aa14.38□□□□□ -0.11
SSBP3-206ENST00000420121 SYNE4Q8N205 404 aa14.38□□□□□ -0.11
SSBP3-206ENST00000420121 CRAMP1Q96RY5 1269 aa14.38□□□□□ -0.11
SSBP3-206ENST00000420121 COL4A1P02462 1669 aa14.38□□□□□ -0.11
SSBP3-206ENST00000420121 RNF123Q5XPI4 1314 aa14.38□□□□□ -0.11
SSBP3-206ENST00000420121 DDNO94850 711 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-206ENST00000420121 GNAI1P63096 354 aa14.37□□□□□ -0.11
SSBP3-206ENST00000420121 FSTL1Q12841 308 aa14.37□□□□□ -0.11
SSBP3-206ENST00000420121 C16orf71Q8IYS4 520 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-206ENST00000420121 RTKN2Q8IZC4 609 aa14.37□□□□□ -0.11
SSBP3-206ENST00000420121 UTP14AQ9BVJ6 771 aaKnown RBP14.37□□□□□ -0.11
SSBP3-206ENST00000420121 ZNF277Q9NRM2 450 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-206ENST00000420121 DBF4Q9UBU7 674 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-206ENST00000420121 LRRC37AA6NMS7 1700 aa14.37□□□□□ -0.11
SSBP3-206ENST00000420121 APLP1P51693 650 aa14.36□□□□□ -0.11
SSBP3-206ENST00000420121 HSP90AB3PQ58FF7 597 aa14.36□□□□□ -0.11
SSBP3-206ENST00000420121 DPY19L2Q6NUT2 758 aa14.36□□□□□ -0.11
SSBP3-206ENST00000420121 DNAJC5GQ8N7S2 189 aa14.36□□□□□ -0.11
SSBP3-206ENST00000420121 C8orf58Q8NAV2 365 aa14.36□□□□□ -0.11
SSBP3-206ENST00000420121 PLBD2Q8NHP8 589 aa14.36□□□□□ -0.11
SSBP3-206ENST00000420121 RPGRQ92834 1020 aaKnown RBP14.36□□□□□ -0.11
SSBP3-206ENST00000420121 PSMD1Q99460 953 aa14.36□□□□□ -0.11
SSBP3-206ENST00000420121 ISCA1Q9BUE6 129 aa14.36□□□□□ -0.11
SSBP3-206ENST00000420121 ADAMTSL1Q8N6G6 1762 aa14.36□□□□□ -0.11
SSBP3-206ENST00000420121 ZNF541Q9H0D2 1346 aa14.36□□□□□ -0.11
SSBP3-206ENST00000420121 ANKRD13DQ6ZTN6 518 aa14.35□□□□□ -0.11
SSBP3-206ENST00000420121 NLRP3Q96P20 1036 aa14.35□□□□□ -0.11
SSBP3-206ENST00000420121 ABCC4O15439 1325 aa14.35□□□□□ -0.11
SSBP3-206ENST00000420121 LTBP1Q14766 1721 aa14.35□□□□□ -0.11
SSBP3-206ENST00000420121 ELL2O00472 640 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-206ENST00000420121 HCLS1P14317 486 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-206ENST00000420121 IARSP41252 1262 aaKnown RBP14.34□□□□□ -0.11
SSBP3-206ENST00000420121 HTRA3P83110 453 aa14.34□□□□□ -0.11
SSBP3-206ENST00000420121 CALD1Q05682 793 aaKnown RBP14.34□□□□□ -0.11
SSBP3-206ENST00000420121 CCDC27Q2M243 656 aa14.34□□□□□ -0.11
SSBP3-206ENST00000420121 CC2D2BQ6DHV5 1058 aa14.34□□□□□ -0.11
SSBP3-206ENST00000420121 SMC1BQ8NDV3 1235 aa14.34□□□□□ -0.11
SSBP3-206ENST00000420121 ZNF428Q96B54 188 aa14.34□□□□□ -0.11
SSBP3-206ENST00000420121 RBM17Q96I25 401 aaKnown RBP14.34□□□□□ -0.11
SSBP3-206ENST00000420121 L3MBTL3Q96JM7 780 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-206ENST00000420121 PHAXQ9H814 394 aaKnown RBP14.34□□□□□ -0.11
SSBP3-206ENST00000420121 HYPKQ9NX55 129 aa14.34□□□□□ -0.11
SSBP3-206ENST00000420121 FZD9O00144 591 aa14.33□□□□□ -0.12
SSBP3-206ENST00000420121 PPEF1O14829 653 aaPredicted RBP14.33□□□□□ -0.12
SSBP3-206ENST00000420121 POTEIP0CG38 1075 aa14.33□□□□□ -0.12
SSBP3-206ENST00000420121 POTEJP0CG39 1038 aa14.33□□□□□ -0.12
SSBP3-206ENST00000420121 TSPYL6Q8N831 410 aa14.33□□□□□ -0.12
SSBP3-206ENST00000420121 TRMT112Q9UI30 125 aaKnown RBP14.33□□□□□ -0.12
SSBP3-206ENST00000420121 DUOX1Q9NRD9 1551 aa14.33□□□□□ -0.12
SSBP3-206ENST00000420121 ATP5J2-PTCD1G3V325 749 aa14.32□□□□□ -0.12
SSBP3-206ENST00000420121 WWC1Q8IX03 1113 aa14.32□□□□□ -0.12
SSBP3-206ENST00000420121 SH3TC1Q8TE82 1336 aa14.32□□□□□ -0.12
SSBP3-206ENST00000420121 CACNA1FO60840 1977 aa14.31□□□□□ -0.12
SSBP3-206ENST00000420121 TCERG1O14776 1098 aaKnown RBP14.31□□□□□ -0.12
SSBP3-206ENST00000420121 TRIM28Q13263 835 aaKnown RBP14.31□□□□□ -0.12
SSBP3-206ENST00000420121 TSR2Q969E8 191 aaKnown RBP14.31□□□□□ -0.12
SSBP3-206ENST00000420121 MRS2Q9HD23 443 aa14.31□□□□□ -0.12
SSBP3-206ENST00000420121 ATP6V0A2Q9Y487 856 aa14.31□□□□□ -0.12
SSBP3-206ENST00000420121 GRIPAP1Q4V328 841 aa14.3□□□□□ -0.12
SSBP3-206ENST00000420121 FAM89AQ96GI7 184 aa14.3□□□□□ -0.12
SSBP3-206ENST00000420121 FOXD4L1Q9NU39 408 aa14.3□□□□□ -0.12
SSBP3-206ENST00000420121 ANP32CO43423 234 aa14.29□□□□□ -0.12
SSBP3-206ENST00000420121 RTFDC1Q9BY42 306 aaPredicted RBP14.29□□□□□ -0.12
SSBP3-206ENST00000420121 TAF1DQ9H5J8 278 aaPredicted RBP14.29□□□□□ -0.12
SSBP3-206ENST00000420121 MYH3P11055 1940 aa14.29□□□□□ -0.12
SSBP3-206ENST00000420121 BBOX1O75936 387 aa14.28□□□□□ -0.12
SSBP3-206ENST00000420121 GRAPQ13588 217 aa14.28□□□□□ -0.12
SSBP3-206ENST00000420121 IL16Q14005 1332 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms