RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 RBSNQ9H1K0 784 aa7.9□□□□□ -1.14
CLIP4-205ENST00000415891 ZBED9Q6R2W3 1325 aa7.9□□□□□ -1.14
CLIP4-205ENST00000415891 BRD4O60885 1362 aaPredicted RBP7.9□□□□□ -1.14
CLIP4-205ENST00000415891 PDCD2Q16342 344 aaPredicted RBP7.9□□□□□ -1.15
CLIP4-205ENST00000415891 FAM81BQ96LP2 452 aa7.9□□□□□ -1.15
CLIP4-205ENST00000415891 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.15
CLIP4-205ENST00000415891 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.89□□□□□ -1.15
CLIP4-205ENST00000415891 MYO1BO43795 1136 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 FOSP01100 380 aaPredicted RBP7.89□□□□□ -1.15
CLIP4-205ENST00000415891 ZNF24P17028 368 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 HOXC13P31276 330 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 SH3BGRP55822 239 aaPredicted RBP7.89□□□□□ -1.15
CLIP4-205ENST00000415891 TBC1D25Q3MII6 688 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 PARP10Q53GL7 1025 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 CCBE1Q6UXH8 406 aaPredicted RBP7.89□□□□□ -1.15
CLIP4-205ENST00000415891 JAZF1Q86VZ6 243 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 ARL6IP6Q8N6S5 226 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 ARL10Q8N8L6 244 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 CCDC191Q8NCU4 936 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 SLC7A5P2Q9GIP4 190 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 CHST12Q9NRB3 414 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 TBC1D7Q9P0N9 293 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 ZMAT5Q9UDW3 170 aaKnown RBP7.89□□□□□ -1.15
CLIP4-205ENST00000415891 DMGDHQ9UI17 866 aaKnown RBP7.89□□□□□ -1.15
CLIP4-205ENST00000415891 FAM25EA8MYX2 175 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 RGS20O76081 388 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 TOMM20Q15388 145 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 FAAH2Q6GMR7 532 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 SAPCD2Q86UD0 394 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 GOLGA6L1Q8N7Z2 621 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.89□□□□□ -1.15
CLIP4-205ENST00000415891 APPL2Q8NEU8 664 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 BICD1Q96G01 975 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 CDK5RAP3Q96JB5 506 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 TMEM87BQ96K49 555 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 BAG1Q99933 345 aaPredicted RBP7.89□□□□□ -1.15
CLIP4-205ENST00000415891 RASSF4Q9H2L5 321 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 CLIP2Q9UDT6 1046 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 XPO7Q9UIA9 1087 aaKnown RBP7.89□□□□□ -1.15
CLIP4-205ENST00000415891 TTF2Q9UNY4 1162 aaKnown RBP7.89□□□□□ -1.15
CLIP4-205ENST00000415891 TMEM98Q9Y2Y6 226 aa7.89□□□□□ -1.15
CLIP4-205ENST00000415891 BICRAQ9NZM4 1560 aa7.88□□□□□ -1.15
CLIP4-205ENST00000415891 SETD1BQ9UPS6 1966 aaKnown RBP7.88□□□□□ -1.15
CLIP4-205ENST00000415891 PRSS47A8MTI9 375 aa7.88□□□□□ -1.15
CLIP4-205ENST00000415891 RPN1P04843 607 aaKnown RBP7.88□□□□□ -1.15
CLIP4-205ENST00000415891 ERCC5P28715 1186 aaPredicted RBP7.88□□□□□ -1.15
CLIP4-205ENST00000415891 RWDD2BP57060 319 aa7.88□□□□□ -1.15
CLIP4-205ENST00000415891 CBX1P83916 185 aa7.88□□□□□ -1.15
CLIP4-205ENST00000415891 RC3H1Q5TC82 1133 aaKnown RBP7.88□□□□□ -1.15
CLIP4-205ENST00000415891 SH3TC2Q8TF17 1288 aa7.88□□□□□ -1.15
CLIP4-205ENST00000415891 TBC1D20Q96BZ9 403 aa7.88□□□□□ -1.15
CLIP4-205ENST00000415891 TRIM7Q9C029 511 aa7.88□□□□□ -1.15
CLIP4-205ENST00000415891 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.88□□□□□ -1.15
CLIP4-205ENST00000415891 BIN2Q9UBW5 565 aaPredicted RBP7.88□□□□□ -1.15
CLIP4-205ENST00000415891 BARX2Q9UMQ3 279 aaPredicted RBP7.88□□□□□ -1.15
CLIP4-205ENST00000415891 MORC2Q9Y6X9 1032 aaPredicted RBP7.88□□□□□ -1.15
CLIP4-205ENST00000415891 RAPGEF3O95398 923 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 SYCP2LQ5T4T6 812 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 EFCAB13Q8IY85 973 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 PBXIP1Q96AQ6 731 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 PLEKHG4BQ96PX9 1271 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 C6orf203Q9P0P8 240 aaPredicted RBP7.87□□□□□ -1.15
CLIP4-205ENST00000415891 CPSF2Q9P2I0 782 aaKnown RBP7.87□□□□□ -1.15
CLIP4-205ENST00000415891 NPHP1O15259 732 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 VAMP1P23763 118 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 RNF187Q5TA31 235 aaPredicted RBP7.87□□□□□ -1.15
CLIP4-205ENST00000415891 DRAXINQ8NBI3 349 aaPredicted RBP7.87□□□□□ -1.15
CLIP4-205ENST00000415891 CCDC26Q8TAB7 109 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 PPM1EQ8WY54 764 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 FAM163AQ96GL9 167 aaPredicted RBP7.87□□□□□ -1.15
CLIP4-205ENST00000415891 GSDMAQ96QA5 445 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 EXOC1Q9NV70 894 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 CHMP5Q9NZZ3 219 aa7.87□□□□□ -1.15
CLIP4-205ENST00000415891 A0A1W2PRQ8 180 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 C19orf81C9J6K1 198 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 GJA8P48165 433 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 KRT72Q14CN4 511 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 SLC5A9Q2M3M2 681 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 CCDC158Q5M9N0 1113 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 BRSK2Q8IWQ3 736 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 SLC43A3Q8NBI5 491 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 TBC1D31Q96DN5 1066 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 SLC39A3Q9BRY0 314 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 TBK1Q9UHD2 729 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 GNEQ9Y223 722 aaKnown RBP7.86□□□□□ -1.15
CLIP4-205ENST00000415891 E2F6O75461 281 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 HARSP12081 509 aaKnown RBP7.86□□□□□ -1.15
CLIP4-205ENST00000415891 BIRC3Q13489 604 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 PDIA5Q14554 519 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 ACBD5Q5T8D3 534 aaPredicted RBP7.86□□□□□ -1.15
CLIP4-205ENST00000415891 PACS1Q6VY07 963 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 TSR2Q969E8 191 aaKnown RBP7.86□□□□□ -1.15
CLIP4-205ENST00000415891 THOC1Q96FV9 657 aaKnown RBP7.86□□□□□ -1.15
CLIP4-205ENST00000415891 C8orf48Q96LL4 319 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 SPATA7Q9P0W8 599 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 COG6Q9Y2V7 657 aa7.86□□□□□ -1.15
CLIP4-205ENST00000415891 UQCRHLA0A096LP55 91 aa7.85□□□□□ -1.15
CLIP4-205ENST00000415891 UQCRHP07919 91 aa7.85□□□□□ -1.15
CLIP4-205ENST00000415891 HHATQ5VTY9 493 aa7.85□□□□□ -1.15
CLIP4-205ENST00000415891 C9orf131Q5VYM1 1079 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms