RNA–Protein interactions for RNA: ENST00000415314.6

GPATCH4-202, Transcript of G-patch domain containing 4, humanhuman

APPRIS ALT2 TSL 3

Gene GPATCH4, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-202ENST00000415314 C1QTNF8P60827 252 aa17.02■□□□□ 0.32
GPATCH4-202ENST00000415314 RASSF7Q02833 373 aa17.02■□□□□ 0.32
GPATCH4-202ENST00000415314 ANKRD13DQ6ZTN6 518 aa17.02■□□□□ 0.32
GPATCH4-202ENST00000415314 UTP14AQ9BVJ6 771 aaKnown RBP17.02■□□□□ 0.32
GPATCH4-202ENST00000415314 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.31
GPATCH4-202ENST00000415314 TCIRG1Q13488 830 aa17.01■□□□□ 0.31
GPATCH4-202ENST00000415314 PLBD2Q8NHP8 589 aa17.01■□□□□ 0.31
GPATCH4-202ENST00000415314 SALL2Q9Y467 1007 aaPredicted RBP17.01■□□□□ 0.31
GPATCH4-202ENST00000415314 ANKRD36CQ5JPF3 1778 aa17■□□□□ 0.31
GPATCH4-202ENST00000415314 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
GPATCH4-202ENST00000415314 FER1L6Q2WGJ9 1857 aa17■□□□□ 0.31
GPATCH4-202ENST00000415314 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
GPATCH4-202ENST00000415314 C8orf58Q8NAV2 365 aa17■□□□□ 0.31
GPATCH4-202ENST00000415314 RPGRQ92834 1020 aaKnown RBP17■□□□□ 0.31
GPATCH4-202ENST00000415314 NTSR2O95665 410 aa16.99■□□□□ 0.31
GPATCH4-202ENST00000415314 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
GPATCH4-202ENST00000415314 NLRP3Q96P20 1036 aa16.99■□□□□ 0.31
GPATCH4-202ENST00000415314 IL16Q14005 1332 aa16.98■□□□□ 0.31
GPATCH4-202ENST00000415314 KDM2BQ8NHM5 1336 aa16.98■□□□□ 0.31
GPATCH4-202ENST00000415314 NFKBIEO00221 500 aa16.98■□□□□ 0.31
GPATCH4-202ENST00000415314 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
GPATCH4-202ENST00000415314 NLRP10Q86W26 655 aa16.98■□□□□ 0.31
GPATCH4-202ENST00000415314 RBM17Q96I25 401 aaKnown RBP16.98■□□□□ 0.31
GPATCH4-202ENST00000415314 TAOK3Q9H2K8 898 aa16.98■□□□□ 0.31
GPATCH4-202ENST00000415314 TRMT112Q9UI30 125 aaKnown RBP16.98■□□□□ 0.31
GPATCH4-202ENST00000415314 ABCC12Q96J65 1359 aa16.98■□□□□ 0.31
GPATCH4-202ENST00000415314 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
GPATCH4-202ENST00000415314 ZC3H4Q9UPT8 1303 aaKnown RBP16.97■□□□□ 0.31
GPATCH4-202ENST00000415314 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
GPATCH4-202ENST00000415314 CRY2Q49AN0 593 aa16.97■□□□□ 0.31
GPATCH4-202ENST00000415314 CCDC93Q567U6 631 aa16.97■□□□□ 0.31
GPATCH4-202ENST00000415314 SLC10A5Q5PT55 438 aa16.97■□□□□ 0.31
GPATCH4-202ENST00000415314 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
GPATCH4-202ENST00000415314 DICER1Q9UPY3 1922 aaKnown RBP16.97■□□□□ 0.31
GPATCH4-202ENST00000415314 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
GPATCH4-202ENST00000415314 RTKN2Q8IZC4 609 aa16.96■□□□□ 0.31
GPATCH4-202ENST00000415314 STK31Q9BXU1 1019 aa16.96■□□□□ 0.31
GPATCH4-202ENST00000415314 LTBP3Q9NS15 1303 aa16.96■□□□□ 0.3
GPATCH4-202ENST00000415314 DDX58O95786 925 aaKnown RBP16.95■□□□□ 0.3
GPATCH4-202ENST00000415314 HOXA10P31260 410 aaPredicted RBP16.95■□□□□ 0.3
GPATCH4-202ENST00000415314 DPY19L2Q6NUT2 758 aa16.95■□□□□ 0.3
GPATCH4-202ENST00000415314 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
GPATCH4-202ENST00000415314 C7orf43Q8WVR3 580 aa16.95■□□□□ 0.3
GPATCH4-202ENST00000415314 TMX4Q9H1E5 349 aaPredicted RBP16.95■□□□□ 0.3
GPATCH4-202ENST00000415314 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
GPATCH4-202ENST00000415314 RIC1Q4ADV7 1423 aa16.95■□□□□ 0.3
GPATCH4-202ENST00000415314 SH3TC1Q8TE82 1336 aa16.95■□□□□ 0.3
GPATCH4-202ENST00000415314 TNRC6CQ9HCJ0 1690 aaKnown RBP16.94■□□□□ 0.3
GPATCH4-202ENST00000415314 ATP5J2-PTCD1G3V325 749 aa16.94■□□□□ 0.3
GPATCH4-202ENST00000415314 KIF3CO14782 793 aa16.94■□□□□ 0.3
GPATCH4-202ENST00000415314 PRELPP51888 382 aa16.94■□□□□ 0.3
GPATCH4-202ENST00000415314 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
GPATCH4-202ENST00000415314 C16orf71Q8IYS4 520 aaPredicted RBP16.94■□□□□ 0.3
GPATCH4-202ENST00000415314 CRAMP1Q96RY5 1269 aa16.94■□□□□ 0.3
GPATCH4-202ENST00000415314 NMRK2Q9NPI5 230 aa16.94■□□□□ 0.3
GPATCH4-202ENST00000415314 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
GPATCH4-202ENST00000415314 HCLS1P14317 486 aaPredicted RBP16.93■□□□□ 0.3
GPATCH4-202ENST00000415314 CC2D2BQ6DHV5 1058 aa16.93■□□□□ 0.3
GPATCH4-202ENST00000415314 ISCA1Q9BUE6 129 aa16.93■□□□□ 0.3
GPATCH4-202ENST00000415314 GLTPD2A6NH11 291 aa16.92■□□□□ 0.3
GPATCH4-202ENST00000415314 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
GPATCH4-202ENST00000415314 C1QBPQ07021 282 aaKnown RBP16.92■□□□□ 0.3
GPATCH4-202ENST00000415314 GRIPAP1Q4V328 841 aa16.92■□□□□ 0.3
GPATCH4-202ENST00000415314 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
GPATCH4-202ENST00000415314 RRAGCQ9HB90 399 aa16.92■□□□□ 0.3
GPATCH4-202ENST00000415314 TIAM2Q8IVF5 1701 aa16.91■□□□□ 0.3
GPATCH4-202ENST00000415314 TOMM70O94826 608 aa16.91■□□□□ 0.3
GPATCH4-202ENST00000415314 TRIM28Q13263 835 aaKnown RBP16.91■□□□□ 0.3
GPATCH4-202ENST00000415314 OLFM4Q6UX06 510 aa16.91■□□□□ 0.3
GPATCH4-202ENST00000415314 C3orf67Q6ZVT6 689 aa16.91■□□□□ 0.3
GPATCH4-202ENST00000415314 SYNE4Q8N205 404 aa16.91■□□□□ 0.3
GPATCH4-202ENST00000415314 FANCIQ9NVI1 1328 aa16.91■□□□□ 0.3
GPATCH4-202ENST00000415314 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
GPATCH4-202ENST00000415314 PPEF1O14829 653 aaPredicted RBP16.9■□□□□ 0.3
GPATCH4-202ENST00000415314 DDX46Q7L014 1031 aaKnown RBP16.9■□□□□ 0.3
GPATCH4-202ENST00000415314 FAM89AQ96GI7 184 aa16.9■□□□□ 0.3
GPATCH4-202ENST00000415314 MYD88Q99836 296 aa16.9■□□□□ 0.3
GPATCH4-202ENST00000415314 MYH16Q9H6N6 1097 aa16.9■□□□□ 0.3
GPATCH4-202ENST00000415314 BBOX1O75936 387 aa16.89■□□□□ 0.29
GPATCH4-202ENST00000415314 HSP90B1P14625 803 aaKnown RBP16.89■□□□□ 0.29
GPATCH4-202ENST00000415314 ZNF277Q9NRM2 450 aaPredicted RBP16.89■□□□□ 0.29
GPATCH4-202ENST00000415314 LAMB2P55268 1798 aa16.89■□□□□ 0.29
GPATCH4-202ENST00000415314 VEGFAP15692 232 aaPredicted RBP16.88■□□□□ 0.29
GPATCH4-202ENST00000415314 NEXNQ0ZGT2 675 aa16.88■□□□□ 0.29
GPATCH4-202ENST00000415314 RTL5Q5HYW3 569 aaPredicted RBP16.88■□□□□ 0.29
GPATCH4-202ENST00000415314 KSR2Q6VAB6 950 aa16.88■□□□□ 0.29
GPATCH4-202ENST00000415314 CCDC191Q8NCU4 936 aa16.88■□□□□ 0.29
GPATCH4-202ENST00000415314 PSMD1Q99460 953 aa16.88■□□□□ 0.29
GPATCH4-202ENST00000415314 METTL22Q9BUU2 404 aaPredicted RBP16.88■□□□□ 0.29
GPATCH4-202ENST00000415314 MAP3K2Q9Y2U5 619 aa16.88■□□□□ 0.29
GPATCH4-202ENST00000415314 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
GPATCH4-202ENST00000415314 IRS4O14654 1257 aaPredicted RBP16.87■□□□□ 0.29
GPATCH4-202ENST00000415314 IARSP41252 1262 aaKnown RBP16.87■□□□□ 0.29
GPATCH4-202ENST00000415314 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
GPATCH4-202ENST00000415314 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
GPATCH4-202ENST00000415314 ZBTB38Q8NAP3 1195 aaPredicted RBP16.87■□□□□ 0.29
GPATCH4-202ENST00000415314 CWC25Q9NXE8 425 aaPredicted RBP16.87■□□□□ 0.29
GPATCH4-202ENST00000415314 ATP6V0A2Q9Y487 856 aa16.87■□□□□ 0.29
GPATCH4-202ENST00000415314 ABCC4O15439 1325 aa16.87■□□□□ 0.29
GPATCH4-202ENST00000415314 VAMP4O75379 141 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms