RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 ST5P78524 1137 aa15.15■□□□□ 0.02
ATG4B-207ENST00000415107 SLC10A5Q5PT55 438 aa15.15■□□□□ 0.02
ATG4B-207ENST00000415107 SUSD4Q5VX71 490 aa15.15■□□□□ 0.02
ATG4B-207ENST00000415107 MYD88Q99836 296 aa15.15■□□□□ 0.02
ATG4B-207ENST00000415107 UTP14AQ9BVJ6 771 aaKnown RBP15.15■□□□□ 0.02
ATG4B-207ENST00000415107 BRIP1Q9BX63 1249 aa15.15■□□□□ 0.02
ATG4B-207ENST00000415107 ABCC4O15439 1325 aa15.15■□□□□ 0.02
ATG4B-207ENST00000415107 ALDH1L1O75891 902 aa15.14■□□□□ 0.01
ATG4B-207ENST00000415107 FHDC1Q9C0D6 1143 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-207ENST00000415107 CWC25Q9NXE8 425 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-207ENST00000415107 PPP1R1BQ9UD71 204 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-207ENST00000415107 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
ATG4B-207ENST00000415107 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
ATG4B-207ENST00000415107 BRCA1P38398 1863 aaKnown RBP15.14■□□□□ 0.01
ATG4B-207ENST00000415107 SH3TC1Q8TE82 1336 aa15.14■□□□□ 0.01
ATG4B-207ENST00000415107 CDHR2Q9BYE9 1310 aa15.14■□□□□ 0.01
ATG4B-207ENST00000415107 ABCC12Q96J65 1359 aa15.13■□□□□ 0.01
ATG4B-207ENST00000415107 TNRC6CQ9HCJ0 1690 aaKnown RBP15.13■□□□□ 0.01
ATG4B-207ENST00000415107 BCAR3O75815 825 aa15.13■□□□□ 0.01
ATG4B-207ENST00000415107 PCCAP05165 728 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-207ENST00000415107 HSP90B1P14625 803 aaKnown RBP15.13■□□□□ 0.01
ATG4B-207ENST00000415107 ATF7IPQ6VMQ6 1270 aa15.13■□□□□ 0.01
ATG4B-207ENST00000415107 DDX60Q8IY21 1712 aaKnown RBP15.13■□□□□ 0.01
ATG4B-207ENST00000415107 ZBTB38Q8NAP3 1195 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-207ENST00000415107 SYT17Q9BSW7 474 aa15.13■□□□□ 0.01
ATG4B-207ENST00000415107 F6X3S4 739 aa15.12■□□□□ 0.01
ATG4B-207ENST00000415107 ATP5J2-PTCD1G3V325 749 aa15.12■□□□□ 0.01
ATG4B-207ENST00000415107 TRIM27P14373 513 aa15.12■□□□□ 0.01
ATG4B-207ENST00000415107 PDE6BP35913 854 aa15.12■□□□□ 0.01
ATG4B-207ENST00000415107 GCKRQ14397 625 aa15.12■□□□□ 0.01
ATG4B-207ENST00000415107 CRY2Q49AN0 593 aa15.12■□□□□ 0.01
ATG4B-207ENST00000415107 ZKSCAN2Q63HK3 967 aa15.12■□□□□ 0.01
ATG4B-207ENST00000415107 UTYO14607 1347 aa15.12■□□□□ 0.01
ATG4B-207ENST00000415107 COL11A2P13942 1736 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-207ENST00000415107 CCT4P50991 539 aaKnown RBP15.11■□□□□ 0.01
ATG4B-207ENST00000415107 SRCIN1Q9C0H9 1055 aa15.11■□□□□ 0.01
ATG4B-207ENST00000415107 TRMT112Q9UI30 125 aaKnown RBP15.11■□□□□ 0.01
ATG4B-207ENST00000415107 H7C1W4 665 aa15.1■□□□□ 0.01
ATG4B-207ENST00000415107 CASP7P55210 303 aa15.1■□□□□ 0.01
ATG4B-207ENST00000415107 CWF19L2Q2TBE0 894 aaKnown RBP15.1■□□□□ 0.01
ATG4B-207ENST00000415107 ERFEQ4G0M1 354 aa15.1■□□□□ 0.01
ATG4B-207ENST00000415107 INTS3Q68E01 1043 aaKnown RBP15.1■□□□□ 0.01
ATG4B-207ENST00000415107 PLA2G12BQ9BX93 195 aa15.1■□□□□ 0.01
ATG4B-207ENST00000415107 GTF2E1P29083 439 aaPredicted RBP15.09■□□□□ 0.01
ATG4B-207ENST00000415107 NUTM1Q86Y26 1132 aa15.09■□□□□ 0.01
ATG4B-207ENST00000415107 NPHP1O15259 732 aa15.08■□□□□ 0
ATG4B-207ENST00000415107 MS4A1P11836 297 aa15.08■□□□□ 0
ATG4B-207ENST00000415107 RTL9Q8NET4 1388 aa15.08■□□□□ 0
ATG4B-207ENST00000415107 MYH3P11055 1940 aa15.07■□□□□ 0
ATG4B-207ENST00000415107 GRM8O00222 908 aa15.07■□□□□ 0
ATG4B-207ENST00000415107 SRGNP10124 158 aa15.07■□□□□ 0
ATG4B-207ENST00000415107 KCNA3P22001 575 aa15.07■□□□□ 0
ATG4B-207ENST00000415107 HOXA10P31260 410 aaPredicted RBP15.07■□□□□ 0
ATG4B-207ENST00000415107 SF3B3Q15393 1217 aaKnown RBP15.07■□□□□ 0
ATG4B-207ENST00000415107 STYK1Q6J9G0 422 aa15.07■□□□□ 0
ATG4B-207ENST00000415107 SLC4A10Q6U841 1118 aa15.07■□□□□ 0
ATG4B-207ENST00000415107 FAM89AQ96GI7 184 aa15.07■□□□□ 0
ATG4B-207ENST00000415107 NLRP3Q96P20 1036 aa15.07■□□□□ 0
ATG4B-207ENST00000415107 ARFGEF1Q9Y6D6 1849 aa15.06■□□□□ 0
ATG4B-207ENST00000415107 H0YIN7 160 aa15.06■□□□□ 0
ATG4B-207ENST00000415107 IRS4O14654 1257 aaPredicted RBP15.06■□□□□ 0
ATG4B-207ENST00000415107 PDE8AO60658 829 aa15.06■□□□□ 0
ATG4B-207ENST00000415107 NPR1P16066 1061 aa15.06■□□□□ 0
ATG4B-207ENST00000415107 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.06■□□□□ 0
ATG4B-207ENST00000415107 NLGN2Q8NFZ4 835 aa15.06■□□□□ 0
ATG4B-207ENST00000415107 FRAT1Q92837 279 aaPredicted RBP15.06■□□□□ 0
ATG4B-207ENST00000415107 MASTLQ96GX5 879 aa15.06■□□□□ 0
ATG4B-207ENST00000415107 FAM177BA6PVY3 158 aa15.05■□□□□ -0
ATG4B-207ENST00000415107 DPEP1P16444 411 aa15.05■□□□□ -0
ATG4B-207ENST00000415107 PDE3AQ14432 1141 aa15.05■□□□□ -0
ATG4B-207ENST00000415107 C2CD5Q86YS7 1000 aa15.05■□□□□ -0
ATG4B-207ENST00000415107 DZIP1LQ8IYY4 767 aaKnown RBP15.05■□□□□ -0
ATG4B-207ENST00000415107 UBE3BQ7Z3V4 1068 aa15.04■□□□□ -0
ATG4B-207ENST00000415107 SYNE4Q8N205 404 aa15.04■□□□□ -0
ATG4B-207ENST00000415107 CRAMP1Q96RY5 1269 aa15.04■□□□□ -0
ATG4B-207ENST00000415107 USP44Q9H0E7 712 aa15.04■□□□□ -0
ATG4B-207ENST00000415107 HCLS1P14317 486 aaPredicted RBP15.03■□□□□ -0
ATG4B-207ENST00000415107 CHRNA5P30532 468 aa15.03■□□□□ -0
ATG4B-207ENST00000415107 CTSWP56202 376 aa15.03■□□□□ -0
ATG4B-207ENST00000415107 FTSJ3Q8IY81 847 aaKnown RBP15.03■□□□□ -0
ATG4B-207ENST00000415107 CCDC24Q8N4L8 307 aa15.03■□□□□ -0
ATG4B-207ENST00000415107 CNKSR1Q969H4 720 aa15.03■□□□□ -0
ATG4B-207ENST00000415107 C9orf78Q9NZ63 289 aaPredicted RBP15.03■□□□□ -0
ATG4B-207ENST00000415107 PIM2Q9P1W9 311 aa15.03■□□□□ -0
ATG4B-207ENST00000415107 HDAC5Q9UQL6 1122 aa15.03■□□□□ -0
ATG4B-207ENST00000415107 A0A0G2JLW4 131 aa15.02■□□□□ -0
ATG4B-207ENST00000415107 CSF1RP07333 972 aa15.02■□□□□ -0
ATG4B-207ENST00000415107 NBPF7P0C2Y1 421 aaPredicted RBP15.02■□□□□ -0
ATG4B-207ENST00000415107 ALDH1B1P30837 517 aa15.02■□□□□ -0
ATG4B-207ENST00000415107 RABL6Q3YEC7 729 aaPredicted RBP15.02■□□□□ -0
ATG4B-207ENST00000415107 C3orf67Q6ZVT6 689 aa15.02■□□□□ -0
ATG4B-207ENST00000415107 KLHL34Q8N239 644 aa15.02■□□□□ -0
ATG4B-207ENST00000415107 TMEM57Q8N5G2 664 aa15.02■□□□□ -0
ATG4B-207ENST00000415107 LRRC37AA6NMS7 1700 aa15.02□□□□□ -0.01
ATG4B-207ENST00000415107 RLBP1P12271 317 aa15.01□□□□□ -0.01
ATG4B-207ENST00000415107 RRP1P56182 461 aaKnown RBP15.01□□□□□ -0.01
ATG4B-207ENST00000415107 CCDC152Q4G0S7 254 aa15.01□□□□□ -0.01
ATG4B-207ENST00000415107 TMC4Q7Z404 712 aa15.01□□□□□ -0.01
ATG4B-207ENST00000415107 TTLL6Q8N841 843 aa15.01□□□□□ -0.01
ATG4B-207ENST00000415107 TTLL11Q8NHH1 800 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms