RNA–Protein interactions for RNA: ENST00000412112.3

LINC01965-201, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 3 BASIC

Gene LINC01965, Length 1,378 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-201ENST00000412112 ZEB1P37275 1124 aaPredicted RBP13.2□□□□□ -0.3
LINC01965-201ENST00000412112 LINC00116Q8NCU8 138 aa13.2□□□□□ -0.3
LINC01965-201ENST00000412112 MAP3K5Q99683 1374 aa13.19□□□□□ -0.3
LINC01965-201ENST00000412112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.19□□□□□ -0.3
LINC01965-201ENST00000412112 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
LINC01965-201ENST00000412112 SSFA2P28290 1259 aa13.19□□□□□ -0.3
LINC01965-201ENST00000412112 ITPK1Q13572 414 aa13.19□□□□□ -0.3
LINC01965-201ENST00000412112 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
LINC01965-201ENST00000412112 NFATC2IPQ8NCF5 419 aa13.19□□□□□ -0.3
LINC01965-201ENST00000412112 KDM6AO15550 1401 aaPredicted RBP13.18□□□□□ -0.3
LINC01965-201ENST00000412112 GNPATO15228 680 aa13.18□□□□□ -0.3
LINC01965-201ENST00000412112 FCHSD2O94868 740 aa13.18□□□□□ -0.3
LINC01965-201ENST00000412112 CFAP53Q96M91 514 aa13.18□□□□□ -0.3
LINC01965-201ENST00000412112 C4BP0C0L5 1744 aa13.17□□□□□ -0.3
LINC01965-201ENST00000412112 TUBGCP6Q96RT7 1819 aa13.17□□□□□ -0.3
LINC01965-201ENST00000412112 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
LINC01965-201ENST00000412112 GPR162Q16538 588 aa13.16□□□□□ -0.3
LINC01965-201ENST00000412112 MTHFSDQ2M296 383 aaKnown RBP13.16□□□□□ -0.3
LINC01965-201ENST00000412112 SMYD5Q6GMV2 418 aa13.16□□□□□ -0.3
LINC01965-201ENST00000412112 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
LINC01965-201ENST00000412112 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
LINC01965-201ENST00000412112 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.3
LINC01965-201ENST00000412112 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
LINC01965-201ENST00000412112 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
LINC01965-201ENST00000412112 VSIG10Q8N0Z9 540 aa13.15□□□□□ -0.3
LINC01965-201ENST00000412112 NUDCQ9Y266 331 aa13.15□□□□□ -0.3
LINC01965-201ENST00000412112 ADGRG1Q9Y653 693 aa13.15□□□□□ -0.3
LINC01965-201ENST00000412112 RNMTO43148 476 aaKnown RBP13.14□□□□□ -0.31
LINC01965-201ENST00000412112 SWT1Q5T5J6 900 aaKnown RBP13.14□□□□□ -0.31
LINC01965-201ENST00000412112 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
LINC01965-201ENST00000412112 SLC4A9Q96Q91 983 aa13.14□□□□□ -0.31
LINC01965-201ENST00000412112 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
LINC01965-201ENST00000412112 LGR6Q9HBX8 967 aa13.14□□□□□ -0.31
LINC01965-201ENST00000412112 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
LINC01965-201ENST00000412112 RNF40O75150 1001 aa13.13□□□□□ -0.31
LINC01965-201ENST00000412112 KCNC4Q03721 635 aa13.13□□□□□ -0.31
LINC01965-201ENST00000412112 RBM26Q5T8P6 1007 aaKnown RBP13.13□□□□□ -0.31
LINC01965-201ENST00000412112 GAS2L2Q8NHY3 880 aa13.13□□□□□ -0.31
LINC01965-201ENST00000412112 CD2APQ9Y5K6 639 aa13.13□□□□□ -0.31
LINC01965-201ENST00000412112 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
LINC01965-201ENST00000412112 RPS6KA4O75676 772 aa13.12□□□□□ -0.31
LINC01965-201ENST00000412112 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
LINC01965-201ENST00000412112 NLGN2Q8NFZ4 835 aa13.12□□□□□ -0.31
LINC01965-201ENST00000412112 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
LINC01965-201ENST00000412112 RGS20O76081 388 aa13.11□□□□□ -0.31
LINC01965-201ENST00000412112 RFC4P35249 363 aa13.11□□□□□ -0.31
LINC01965-201ENST00000412112 SLF2Q8IX21 1173 aa13.11□□□□□ -0.31
LINC01965-201ENST00000412112 RBM46Q8TBY0 533 aaKnown RBP13.11□□□□□ -0.31
LINC01965-201ENST00000412112 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
LINC01965-201ENST00000412112 UBR3Q6ZT12 1888 aa13.1□□□□□ -0.31
LINC01965-201ENST00000412112 GNAT3A8MTJ3 354 aa13.1□□□□□ -0.31
LINC01965-201ENST00000412112 NLGN1Q8N2Q7 840 aa13.1□□□□□ -0.31
LINC01965-201ENST00000412112 ZNF831Q5JPB2 1677 aa13.09□□□□□ -0.31
LINC01965-201ENST00000412112 U2AF1L5P0DN76 240 aaPredicted RBP13.09□□□□□ -0.31
LINC01965-201ENST00000412112 DNAJB2P25686 324 aa13.09□□□□□ -0.31
LINC01965-201ENST00000412112 CRKLP46109 303 aaKnown RBP13.09□□□□□ -0.31
LINC01965-201ENST00000412112 U2AF1Q01081 240 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC01965-201ENST00000412112 TEFQ10587 303 aa13.09□□□□□ -0.31
LINC01965-201ENST00000412112 GRIN3BO60391 1043 aa13.08□□□□□ -0.31
LINC01965-201ENST00000412112 PRKAR2BP31323 418 aa13.08□□□□□ -0.31
LINC01965-201ENST00000412112 SLC39A6Q13433 755 aa13.08□□□□□ -0.31
LINC01965-201ENST00000412112 HIC1Q14526 733 aa13.08□□□□□ -0.31
LINC01965-201ENST00000412112 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.31
LINC01965-201ENST00000412112 SCN11AQ9UI33 1791 aa13.07□□□□□ -0.32
LINC01965-201ENST00000412112 MMP10P09238 476 aa13.07□□□□□ -0.32
LINC01965-201ENST00000412112 SLC4A3P48751 1232 aa13.07□□□□□ -0.32
LINC01965-201ENST00000412112 APLP1P51693 650 aa13.07□□□□□ -0.32
LINC01965-201ENST00000412112 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
LINC01965-201ENST00000412112 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
LINC01965-201ENST00000412112 FAM161AQ3B820 660 aa13.07□□□□□ -0.32
LINC01965-201ENST00000412112 TJAP1Q5JTD0 557 aa13.07□□□□□ -0.32
LINC01965-201ENST00000412112 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
LINC01965-201ENST00000412112 TMEM134Q9H6X4 195 aa13.07□□□□□ -0.32
LINC01965-201ENST00000412112 MRC1P22897 1456 aa13.07□□□□□ -0.32
LINC01965-201ENST00000412112 GPR37O15354 613 aa13.06□□□□□ -0.32
LINC01965-201ENST00000412112 NEFMP07197 916 aa13.06□□□□□ -0.32
LINC01965-201ENST00000412112 GYS1P13807 737 aa13.06□□□□□ -0.32
LINC01965-201ENST00000412112 INTS5Q6P9B9 1019 aaKnown RBP13.06□□□□□ -0.32
LINC01965-201ENST00000412112 RTF1Q92541 710 aaKnown RBP13.06□□□□□ -0.32
LINC01965-201ENST00000412112 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
LINC01965-201ENST00000412112 CCDC87Q9NVE4 849 aa13.06□□□□□ -0.32
LINC01965-201ENST00000412112 PARP3Q9Y6F1 533 aa13.06□□□□□ -0.32
LINC01965-201ENST00000412112 CYP19A1P11511 503 aaPredicted RBP13.05□□□□□ -0.32
LINC01965-201ENST00000412112 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC01965-201ENST00000412112 MTRQ99707 1265 aa13.05□□□□□ -0.32
LINC01965-201ENST00000412112 COL5A3P25940 1745 aaPredicted RBP13.04□□□□□ -0.32
LINC01965-201ENST00000412112 RCCD1A6NED2 376 aa13.04□□□□□ -0.32
LINC01965-201ENST00000412112 ZPR1O75312 459 aa13.04□□□□□ -0.32
LINC01965-201ENST00000412112 STARD3NLO95772 234 aa13.04□□□□□ -0.32
LINC01965-201ENST00000412112 DDX10Q13206 875 aaKnown RBP13.04□□□□□ -0.32
LINC01965-201ENST00000412112 ZNF790Q6PG37 636 aa13.04□□□□□ -0.32
LINC01965-201ENST00000412112 BTBD11A6QL63 1104 aa13.03□□□□□ -0.32
LINC01965-201ENST00000412112 TGFB2P61812 414 aa13.03□□□□□ -0.32
LINC01965-201ENST00000412112 ZNF784Q8NCA9 323 aaPredicted RBP13.03□□□□□ -0.32
LINC01965-201ENST00000412112 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
LINC01965-201ENST00000412112 SRP68Q9UHB9 627 aaKnown RBP13.03□□□□□ -0.32
LINC01965-201ENST00000412112 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
LINC01965-201ENST00000412112 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.32
LINC01965-201ENST00000412112 OATP04181 439 aa13.02□□□□□ -0.33
LINC01965-201ENST00000412112 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms