RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 API5Q9BZZ5 524 aaKnown RBP23.06■■□□□ 1.28
PAX3-208ENST00000409828 ATP5J2-PTCD1G3V325 749 aa23.05■■□□□ 1.28
PAX3-208ENST00000409828 IGKV5-2P06315 115 aa23.05■■□□□ 1.28
PAX3-208ENST00000409828 SLC10A5Q5PT55 438 aa23.05■■□□□ 1.28
PAX3-208ENST00000409828 CWC25Q9NXE8 425 aaPredicted RBP23.05■■□□□ 1.28
PAX3-208ENST00000409828 NOB1Q9ULX3 412 aaKnown RBP23.05■■□□□ 1.28
PAX3-208ENST00000409828 KIAA1551Q9HCM1 1747 aa23.05■■□□□ 1.28
PAX3-208ENST00000409828 NEURL1BA8MQ27 555 aa23.04■■□□□ 1.28
PAX3-208ENST00000409828 GTF2E1P29083 439 aaPredicted RBP23.04■■□□□ 1.28
PAX3-208ENST00000409828 BEND3Q5T5X7 828 aa23.04■■□□□ 1.28
PAX3-208ENST00000409828 SH3TC1Q8TE82 1336 aa23.04■■□□□ 1.28
PAX3-208ENST00000409828 KLRG2A4D1S0 409 aaPredicted RBP23.03■■□□□ 1.28
PAX3-208ENST00000409828 F6X3S4 739 aa23.03■■□□□ 1.28
PAX3-208ENST00000409828 NPHP1O15259 732 aa23.03■■□□□ 1.28
PAX3-208ENST00000409828 BCAR3O75815 825 aa23.03■■□□□ 1.28
PAX3-208ENST00000409828 HSP90B1P14625 803 aaKnown RBP23.03■■□□□ 1.28
PAX3-208ENST00000409828 PDE6BP35913 854 aa23.03■■□□□ 1.28
PAX3-208ENST00000409828 TRMT112Q9UI30 125 aaKnown RBP23.03■■□□□ 1.28
PAX3-208ENST00000409828 DLEC1Q9Y238 1755 aa23.02■■□□□ 1.28
PAX3-208ENST00000409828 ALDH1L1O75891 902 aa23.02■■□□□ 1.28
PAX3-208ENST00000409828 ZBTB38Q8NAP3 1195 aaPredicted RBP23.02■■□□□ 1.28
PAX3-208ENST00000409828 RCAN3Q9UKA8 241 aa23.02■■□□□ 1.28
PAX3-208ENST00000409828 LAMB2P55268 1798 aa23.01■■□□□ 1.27
PAX3-208ENST00000409828 BRCA1P38398 1863 aaKnown RBP23.01■■□□□ 1.27
PAX3-208ENST00000409828 PCCAP05165 728 aaPredicted RBP23.01■■□□□ 1.27
PAX3-208ENST00000409828 FAM177BA6PVY3 158 aa23■■□□□ 1.27
PAX3-208ENST00000409828 GCKRQ14397 625 aa23■■□□□ 1.27
PAX3-208ENST00000409828 ERFEQ4G0M1 354 aa23■■□□□ 1.27
PAX3-208ENST00000409828 ATF7IPQ6VMQ6 1270 aa23■■□□□ 1.27
PAX3-208ENST00000409828 SRCIN1Q9C0H9 1055 aa23■■□□□ 1.27
PAX3-208ENST00000409828 CWF19L2Q2TBE0 894 aaKnown RBP22.99■■□□□ 1.27
PAX3-208ENST00000409828 ZKSCAN2Q63HK3 967 aa22.99■■□□□ 1.27
PAX3-208ENST00000409828 NUTM1Q86Y26 1132 aa22.99■■□□□ 1.27
PAX3-208ENST00000409828 CDHR2Q9BYE9 1310 aa22.99■■□□□ 1.27
PAX3-208ENST00000409828 DDX60Q8IY21 1712 aaKnown RBP22.99■■□□□ 1.27
PAX3-208ENST00000409828 H7C1W4 665 aa22.98■■□□□ 1.27
PAX3-208ENST00000409828 CCT4P50991 539 aaKnown RBP22.98■■□□□ 1.27
PAX3-208ENST00000409828 KLHL34Q8N239 644 aa22.98■■□□□ 1.27
PAX3-208ENST00000409828 ABCC12Q96J65 1359 aa22.98■■□□□ 1.27
PAX3-208ENST00000409828 H0YIN7 160 aa22.97■■□□□ 1.27
PAX3-208ENST00000409828 CRY2Q49AN0 593 aa22.97■■□□□ 1.27
PAX3-208ENST00000409828 SLC4A10Q6U841 1118 aa22.97■■□□□ 1.27
PAX3-208ENST00000409828 FAM89AQ96GI7 184 aa22.97■■□□□ 1.27
PAX3-208ENST00000409828 ABCC4O15439 1325 aa22.97■■□□□ 1.27
PAX3-208ENST00000409828 MYH3P11055 1940 aa22.96■■□□□ 1.27
PAX3-208ENST00000409828 TRIM27P14373 513 aa22.96■■□□□ 1.27
PAX3-208ENST00000409828 NLGN2Q8NFZ4 835 aa22.96■■□□□ 1.27
PAX3-208ENST00000409828 NLRP3Q96P20 1036 aa22.96■■□□□ 1.27
PAX3-208ENST00000409828 TNRC6CQ9HCJ0 1690 aaKnown RBP22.96■■□□□ 1.27
PAX3-208ENST00000409828 COL11A2P13942 1736 aaPredicted RBP22.96■■□□□ 1.27
PAX3-208ENST00000409828 SRGNP10124 158 aa22.95■■□□□ 1.26
PAX3-208ENST00000409828 INTS3Q68E01 1043 aaKnown RBP22.95■■□□□ 1.26
PAX3-208ENST00000409828 FRAT1Q92837 279 aaPredicted RBP22.95■■□□□ 1.26
PAX3-208ENST00000409828 UTYO14607 1347 aa22.94■■□□□ 1.26
PAX3-208ENST00000409828 IRS4O14654 1257 aaPredicted RBP22.94■■□□□ 1.26
PAX3-208ENST00000409828 MS4A1P11836 297 aa22.94■■□□□ 1.26
PAX3-208ENST00000409828 DPEP1P16444 411 aa22.94■■□□□ 1.26
PAX3-208ENST00000409828 KCNA3P22001 575 aa22.94■■□□□ 1.26
PAX3-208ENST00000409828 C2CD5Q86YS7 1000 aa22.94■■□□□ 1.26
PAX3-208ENST00000409828 CCDC24Q8N4L8 307 aa22.94■■□□□ 1.26
PAX3-208ENST00000409828 GRM8O00222 908 aa22.93■■□□□ 1.26
PAX3-208ENST00000409828 CASP7P55210 303 aa22.93■■□□□ 1.26
PAX3-208ENST00000409828 STYK1Q6J9G0 422 aa22.93■■□□□ 1.26
PAX3-208ENST00000409828 MASTLQ96GX5 879 aa22.93■■□□□ 1.26
PAX3-208ENST00000409828 PLA2G12BQ9BX93 195 aa22.93■■□□□ 1.26
PAX3-208ENST00000409828 PIM2Q9P1W9 311 aa22.93■■□□□ 1.26
PAX3-208ENST00000409828 A0A0G2JLW4 131 aa22.92■■□□□ 1.26
PAX3-208ENST00000409828 NPR1P16066 1061 aa22.92■■□□□ 1.26
PAX3-208ENST00000409828 HOXA10P31260 410 aaPredicted RBP22.92■■□□□ 1.26
PAX3-208ENST00000409828 SF3B3Q15393 1217 aaKnown RBP22.92■■□□□ 1.26
PAX3-208ENST00000409828 SYNE4Q8N205 404 aa22.92■■□□□ 1.26
PAX3-208ENST00000409828 ARFGEF1Q9Y6D6 1849 aa22.92■■□□□ 1.26
PAX3-208ENST00000409828 PDE8AO60658 829 aa22.91■■□□□ 1.26
PAX3-208ENST00000409828 HCLS1P14317 486 aaPredicted RBP22.91■■□□□ 1.26
PAX3-208ENST00000409828 CHRNA5P30532 468 aa22.91■■□□□ 1.26
PAX3-208ENST00000409828 UBE3BQ7Z3V4 1068 aa22.91■■□□□ 1.26
PAX3-208ENST00000409828 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.91■■□□□ 1.26
PAX3-208ENST00000409828 C9orf78Q9NZ63 289 aaPredicted RBP22.91■■□□□ 1.26
PAX3-208ENST00000409828 CNKSR1Q969H4 720 aa22.9■■□□□ 1.26
PAX3-208ENST00000409828 ALDH1B1P30837 517 aa22.89■■□□□ 1.25
PAX3-208ENST00000409828 DZIP1LQ8IYY4 767 aaKnown RBP22.89■■□□□ 1.25
PAX3-208ENST00000409828 CRAMP1Q96RY5 1269 aa22.89■■□□□ 1.25
PAX3-208ENST00000409828 TTLL6Q8N841 843 aa22.88■■□□□ 1.25
PAX3-208ENST00000409828 USP44Q9H0E7 712 aa22.88■■□□□ 1.25
PAX3-208ENST00000409828 HDAC5Q9UQL6 1122 aa22.88■■□□□ 1.25
PAX3-208ENST00000409828 DALRD3Q5D0E6 543 aaKnown RBP22.87■■□□□ 1.25
PAX3-208ENST00000409828 RTL5Q5HYW3 569 aaPredicted RBP22.87■■□□□ 1.25
PAX3-208ENST00000409828 FTSJ3Q8IY81 847 aaKnown RBP22.87■■□□□ 1.25
PAX3-208ENST00000409828 RPGRQ92834 1020 aaKnown RBP22.87■■□□□ 1.25
PAX3-208ENST00000409828 RBM17Q96I25 401 aaKnown RBP22.87■■□□□ 1.25
PAX3-208ENST00000409828 RTL9Q8NET4 1388 aa22.87■■□□□ 1.25
PAX3-208ENST00000409828 PDE3AQ14432 1141 aa22.86■■□□□ 1.25
PAX3-208ENST00000409828 C3orf67Q6ZVT6 689 aa22.86■■□□□ 1.25
PAX3-208ENST00000409828 CSF1RP07333 972 aa22.85■■□□□ 1.25
PAX3-208ENST00000409828 NBPF7P0C2Y1 421 aaPredicted RBP22.85■■□□□ 1.25
PAX3-208ENST00000409828 CTSWP56202 376 aa22.85■■□□□ 1.25
PAX3-208ENST00000409828 CCDC152Q4G0S7 254 aa22.85■■□□□ 1.25
PAX3-208ENST00000409828 ZNF622Q969S3 477 aaKnown RBP eCLIP22.85■■□□□ 1.25
PAX3-208ENST00000409828 CLUAP1Q96AJ1 413 aa22.85■■□□□ 1.25
PAX3-208ENST00000409828 CACNA1SQ13698 1873 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms