RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 CCDC85AQ96PX6 553 aaPredicted RBP19.52■□□□□ 0.72
SHANK2-204ENST00000409530 NIP7Q9Y221 180 aaKnown RBP eCLIP19.52■□□□□ 0.72
SHANK2-204ENST00000409530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.51■□□□□ 0.71
SHANK2-204ENST00000409530 ERVV-1B6SEH8 477 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 ZPR1O75312 459 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 HSP90AB3PQ58FF7 597 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 NLRP10Q86W26 655 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 ARHGEF1Q92888 912 aaKnown RBP19.51■□□□□ 0.71
SHANK2-204ENST00000409530 LNPKQ9C0E8 428 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 RFC4P35249 363 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 EZH2Q15910 746 aaKnown RBP19.51■□□□□ 0.71
SHANK2-204ENST00000409530 ANKRD45Q5TZF3 282 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 TRMT112Q9UI30 125 aaKnown RBP19.51■□□□□ 0.71
SHANK2-204ENST00000409530 MSH5O43196 834 aa19.5■□□□□ 0.71
SHANK2-204ENST00000409530 ZNF827Q17R98 1081 aa19.5■□□□□ 0.71
SHANK2-204ENST00000409530 UTYO14607 1347 aa19.5■□□□□ 0.71
SHANK2-204ENST00000409530 ATP8B2P98198 1209 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 TRAPPC3LQ5T215 181 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 DEFB132Q7Z7B7 95 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 ZNF652Q9Y2D9 606 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 PLSCR1O15162 318 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 SMARCA5O60264 1052 aaPredicted RBP19.49■□□□□ 0.71
SHANK2-204ENST00000409530 SF3B2Q13435 895 aaKnown RBP19.49■□□□□ 0.71
SHANK2-204ENST00000409530 KLHDC4Q8TBB5 520 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 TFCP2L1Q9NZI6 479 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 PA2G4Q9UQ80 394 aaKnown RBP19.49■□□□□ 0.71
SHANK2-204ENST00000409530 TUBGCP6Q96RT7 1819 aa19.48■□□□□ 0.71
SHANK2-204ENST00000409530 SMC5Q8IY18 1101 aa19.48■□□□□ 0.71
SHANK2-204ENST00000409530 CASP7P55210 303 aa19.48■□□□□ 0.71
SHANK2-204ENST00000409530 NUTM1Q86Y26 1132 aa19.48■□□□□ 0.71
SHANK2-204ENST00000409530 SIL1Q9H173 461 aa19.48■□□□□ 0.71
SHANK2-204ENST00000409530 H7C1W4 665 aa19.47■□□□□ 0.71
SHANK2-204ENST00000409530 SUSD4Q5VX71 490 aa19.47■□□□□ 0.71
SHANK2-204ENST00000409530 TBC1D9BQ66K14 1250 aa19.47■□□□□ 0.71
SHANK2-204ENST00000409530 ZNF34Q8IZ26 560 aa19.47■□□□□ 0.71
SHANK2-204ENST00000409530 NARFQ9UHQ1 456 aa19.47■□□□□ 0.71
SHANK2-204ENST00000409530 LMBR1LQ6UX01 489 aa19.46■□□□□ 0.71
SHANK2-204ENST00000409530 GCC1Q96CN9 775 aa19.46■□□□□ 0.71
SHANK2-204ENST00000409530 BCL2L12Q9HB09 334 aa19.46■□□□□ 0.71
SHANK2-204ENST00000409530 SURF6O75683 361 aaKnown RBP19.46■□□□□ 0.71
SHANK2-204ENST00000409530 OS9Q13438 667 aaPredicted RBP19.46■□□□□ 0.71
SHANK2-204ENST00000409530 CCDC24Q8N4L8 307 aa19.45■□□□□ 0.7
SHANK2-204ENST00000409530 ZBTB38Q8NAP3 1195 aaPredicted RBP19.45■□□□□ 0.7
SHANK2-204ENST00000409530 DCTPP1Q9H773 170 aa19.45■□□□□ 0.7
SHANK2-204ENST00000409530 ZBTB47Q9UFB7 747 aaPredicted RBP19.45■□□□□ 0.7
SHANK2-204ENST00000409530 HDAC5Q9UQL6 1122 aa19.45■□□□□ 0.7
SHANK2-204ENST00000409530 USP42Q9H9J4 1324 aaKnown RBP19.45■□□□□ 0.7
SHANK2-204ENST00000409530 SSH3Q8TE77 659 aa19.45■□□□□ 0.7
SHANK2-204ENST00000409530 RGPD3A6NKT7 1758 aaPredicted RBP19.44■□□□□ 0.7
SHANK2-204ENST00000409530 RGPD4Q7Z3J3 1758 aa19.44■□□□□ 0.7
SHANK2-204ENST00000409530 PCCAP05165 728 aaPredicted RBP19.44■□□□□ 0.7
SHANK2-204ENST00000409530 HCLS1P14317 486 aaPredicted RBP19.44■□□□□ 0.7
SHANK2-204ENST00000409530 CHD1LQ86WJ1 897 aa19.44■□□□□ 0.7
SHANK2-204ENST00000409530 IRS4O14654 1257 aaPredicted RBP19.43■□□□□ 0.7
SHANK2-204ENST00000409530 NPHP1O15259 732 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 NUCB1Q02818 461 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 TRIM28Q13263 835 aaKnown RBP19.43■□□□□ 0.7
SHANK2-204ENST00000409530 PDE4AP27815 886 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 FOXO4P98177 505 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 POLA2Q14181 598 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 UTP14AQ9BVJ6 771 aaKnown RBP19.43■□□□□ 0.7
SHANK2-204ENST00000409530 ANO8Q9HCE9 1232 aaPredicted RBP19.43■□□□□ 0.7
SHANK2-204ENST00000409530 MYH3P11055 1940 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 BAG6P46379 1132 aa19.42■□□□□ 0.7
SHANK2-204ENST00000409530 IL1RAPL2Q9NP60 686 aa19.42■□□□□ 0.7
SHANK2-204ENST00000409530 SSFA2P28290 1259 aa19.42■□□□□ 0.7
SHANK2-204ENST00000409530 GTF2E1P29083 439 aaPredicted RBP19.42■□□□□ 0.7
SHANK2-204ENST00000409530 FAM161AQ3B820 660 aa19.42■□□□□ 0.7
SHANK2-204ENST00000409530 SH3TC1Q8TE82 1336 aa19.41■□□□□ 0.7
SHANK2-204ENST00000409530 CAMKK2Q96RR4 588 aa19.41■□□□□ 0.7
SHANK2-204ENST00000409530 SETDB2Q96T68 719 aa19.41■□□□□ 0.7
SHANK2-204ENST00000409530 DDX60Q8IY21 1712 aaKnown RBP19.41■□□□□ 0.7
SHANK2-204ENST00000409530 NTSR2O95665 410 aa19.4■□□□□ 0.7
SHANK2-204ENST00000409530 MTX1Q13505 466 aa19.4■□□□□ 0.7
SHANK2-204ENST00000409530 PARP10Q53GL7 1025 aa19.4■□□□□ 0.7
SHANK2-204ENST00000409530 CLEC4GQ6UXB4 293 aa19.4■□□□□ 0.7
SHANK2-204ENST00000409530 C16orf71Q8IYS4 520 aaPredicted RBP19.4■□□□□ 0.7
SHANK2-204ENST00000409530 ZNF594Q96JF6 807 aaPredicted RBP19.4■□□□□ 0.7
SHANK2-204ENST00000409530 OTUD7AQ8TE49 926 aaPredicted RBP19.4■□□□□ 0.7
SHANK2-204ENST00000409530 AKT1S1Q96B36 256 aa19.4■□□□□ 0.7
SHANK2-204ENST00000409530 IBTKQ9P2D0 1353 aaPredicted RBP19.39■□□□□ 0.7
SHANK2-204ENST00000409530 ADRA2BP18089 450 aa19.39■□□□□ 0.69
SHANK2-204ENST00000409530 ERFEQ4G0M1 354 aa19.39■□□□□ 0.69
SHANK2-204ENST00000409530 NBPF5PQ86XG9 351 aaPredicted RBP19.39■□□□□ 0.69
SHANK2-204ENST00000409530 CASZ1Q86V15 1759 aa19.39■□□□□ 0.69
SHANK2-204ENST00000409530 RABL6Q3YEC7 729 aaPredicted RBP19.39■□□□□ 0.69
SHANK2-204ENST00000409530 MSL1Q68DK7 614 aa19.39■□□□□ 0.69
SHANK2-204ENST00000409530 LRRCC1Q9C099 1032 aa19.39■□□□□ 0.69
SHANK2-204ENST00000409530 GYS1P13807 737 aa19.38■□□□□ 0.69
SHANK2-204ENST00000409530 CTSWP56202 376 aa19.38■□□□□ 0.69
SHANK2-204ENST00000409530 COL24A1Q17RW2 1714 aa19.38■□□□□ 0.69
SHANK2-204ENST00000409530 COL23A1Q86Y22 540 aaPredicted RBP19.38■□□□□ 0.69
SHANK2-204ENST00000409530 CDHR2Q9BYE9 1310 aa19.38■□□□□ 0.69
SHANK2-204ENST00000409530 GREM2Q9H772 168 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 ABCC12Q96J65 1359 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 NFIXQ14938 502 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 TAF7LQ5H9L4 462 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 TSHZ3Q63HK5 1081 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 SPEF2Q9C093 1822 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 LAMB2P55268 1798 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms