RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RGL2O15211 777 aa22.34■■□□□ 1.17
CHMP3-203ENST00000409225 MLLT1Q03111 559 aaPredicted RBP22.34■■□□□ 1.17
CHMP3-203ENST00000409225 ABCC12Q96J65 1359 aa22.34■■□□□ 1.17
CHMP3-203ENST00000409225 TRAF5O00463 557 aa22.33■■□□□ 1.17
CHMP3-203ENST00000409225 SCNN1DP51172 638 aa22.33■■□□□ 1.17
CHMP3-203ENST00000409225 NUTM1Q86Y26 1132 aa22.33■■□□□ 1.17
CHMP3-203ENST00000409225 RTF1Q92541 710 aaKnown RBP22.33■■□□□ 1.17
CHMP3-203ENST00000409225 RSPH6AQ9H0K4 717 aa22.33■■□□□ 1.17
CHMP3-203ENST00000409225 TSKSQ9UJT2 592 aa22.33■■□□□ 1.17
CHMP3-203ENST00000409225 CRY2Q49AN0 593 aa22.32■■□□□ 1.16
CHMP3-203ENST00000409225 LARGE2Q8N3Y3 721 aa22.32■■□□□ 1.16
CHMP3-203ENST00000409225 CST9Q5W186 159 aa22.31■■□□□ 1.16
CHMP3-203ENST00000409225 CC2D2BQ6DHV5 1058 aa22.31■■□□□ 1.16
CHMP3-203ENST00000409225 NYXQ9GZU5 481 aa22.31■■□□□ 1.16
CHMP3-203ENST00000409225 AOC2O75106 756 aa22.3■■□□□ 1.16
CHMP3-203ENST00000409225 DCTN1Q14203 1278 aa22.3■■□□□ 1.16
CHMP3-203ENST00000409225 USP50Q70EL3 339 aaPredicted RBP22.3■■□□□ 1.16
CHMP3-203ENST00000409225 SLC51AQ86UW1 340 aa22.3■■□□□ 1.16
CHMP3-203ENST00000409225 NGEFQ8N5V2 710 aa22.3■■□□□ 1.16
CHMP3-203ENST00000409225 RPGRQ92834 1020 aaKnown RBP22.3■■□□□ 1.16
CHMP3-203ENST00000409225 TLL2Q9Y6L7 1015 aa22.3■■□□□ 1.16
CHMP3-203ENST00000409225 TCERG1O14776 1098 aaKnown RBP22.29■■□□□ 1.16
CHMP3-203ENST00000409225 TRPM7Q96QT4 1865 aa22.28■■□□□ 1.16
CHMP3-203ENST00000409225 CFAP44Q96MT7 982 aa22.28■■□□□ 1.16
CHMP3-203ENST00000409225 NPC1L1Q9UHC9 1359 aa22.27■■□□□ 1.16
CHMP3-203ENST00000409225 RGS19P49795 217 aa22.27■■□□□ 1.16
CHMP3-203ENST00000409225 NIM1KQ8IY84 436 aa22.27■■□□□ 1.16
CHMP3-203ENST00000409225 CFAP53Q96M91 514 aa22.27■■□□□ 1.16
CHMP3-203ENST00000409225 PPEF1O14829 653 aaPredicted RBP22.26■■□□□ 1.15
CHMP3-203ENST00000409225 HOXA10P31260 410 aaPredicted RBP22.26■■□□□ 1.15
CHMP3-203ENST00000409225 MIS18AQ9NYP9 233 aa22.26■■□□□ 1.15
CHMP3-203ENST00000409225 GPTP24298 496 aa22.25■■□□□ 1.15
CHMP3-203ENST00000409225 MAP2K2P36507 400 aa22.25■■□□□ 1.15
CHMP3-203ENST00000409225 GRIPAP1Q4V328 841 aa22.25■■□□□ 1.15
CHMP3-203ENST00000409225 RBM17Q96I25 401 aaKnown RBP22.25■■□□□ 1.15
CHMP3-203ENST00000409225 ERVV-1B6SEH8 477 aa22.24■■□□□ 1.15
CHMP3-203ENST00000409225 PPIP5K2O43314 1243 aa22.24■■□□□ 1.15
CHMP3-203ENST00000409225 CELF2O95319 508 aaKnown RBP22.24■■□□□ 1.15
CHMP3-203ENST00000409225 U2AF1L5P0DN76 240 aaPredicted RBP22.24■■□□□ 1.15
CHMP3-203ENST00000409225 U2AF1Q01081 240 aaKnown RBP eCLIP22.24■■□□□ 1.15
CHMP3-203ENST00000409225 MCOLN1Q9GZU1 580 aa22.24■■□□□ 1.15
CHMP3-203ENST00000409225 NUDCQ9Y266 331 aa22.24■■□□□ 1.15
CHMP3-203ENST00000409225 MAP3K15Q6ZN16 1313 aa22.24■■□□□ 1.15
CHMP3-203ENST00000409225 LAMB4A4D0S4 1761 aa22.23■■□□□ 1.15
CHMP3-203ENST00000409225 TAF7Q15545 349 aaPredicted RBP22.23■■□□□ 1.15
CHMP3-203ENST00000409225 AOC3Q16853 763 aa22.23■■□□□ 1.15
CHMP3-203ENST00000409225 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
CHMP3-203ENST00000409225 TTLL7Q6ZT98 887 aa22.23■■□□□ 1.15
CHMP3-203ENST00000409225 ADARB2Q9NS39 739 aaKnown RBP22.23■■□□□ 1.15
CHMP3-203ENST00000409225 GPRC5DQ9NZD1 345 aa22.23■■□□□ 1.15
CHMP3-203ENST00000409225 UBN2Q6ZU65 1347 aa22.23■■□□□ 1.15
CHMP3-203ENST00000409225 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
CHMP3-203ENST00000409225 NUP98P52948 1817 aa22.22■■□□□ 1.15
CHMP3-203ENST00000409225 SAPCD2Q86UD0 394 aa22.22■■□□□ 1.15
CHMP3-203ENST00000409225 CRAMP1Q96RY5 1269 aa22.22■■□□□ 1.15
CHMP3-203ENST00000409225 RRP7AQ9Y3A4 280 aaKnown RBP22.22■■□□□ 1.15
CHMP3-203ENST00000409225 SUSD4Q5VX71 490 aa22.21■■□□□ 1.15
CHMP3-203ENST00000409225 C3orf67Q6ZVT6 689 aa22.21■■□□□ 1.15
CHMP3-203ENST00000409225 GLIS2Q9BZE0 524 aaPredicted RBP22.21■■□□□ 1.15
CHMP3-203ENST00000409225 ZBTB3Q9H5J0 574 aa22.21■■□□□ 1.15
CHMP3-203ENST00000409225 CA12O43570 354 aa22.2■■□□□ 1.14
CHMP3-203ENST00000409225 HTATSF1O43719 755 aaKnown RBP22.2■■□□□ 1.14
CHMP3-203ENST00000409225 MYL6BP14649 208 aa22.2■■□□□ 1.14
CHMP3-203ENST00000409225 ZNF408Q9H9D4 720 aa22.2■■□□□ 1.14
CHMP3-203ENST00000409225 IBTKQ9P2D0 1353 aaPredicted RBP22.2■■□□□ 1.14
CHMP3-203ENST00000409225 CCER1Q8TC90 406 aaPredicted RBP22.19■■□□□ 1.14
CHMP3-203ENST00000409225 TMX4Q9H1E5 349 aaPredicted RBP22.19■■□□□ 1.14
CHMP3-203ENST00000409225 CASP8AP2Q9UKL3 1982 aa22.18■■□□□ 1.14
CHMP3-203ENST00000409225 GMPSP49915 693 aaPredicted RBP22.18■■□□□ 1.14
CHMP3-203ENST00000409225 CXCL9Q07325 125 aa22.18■■□□□ 1.14
CHMP3-203ENST00000409225 NTSR2O95665 410 aa22.17■■□□□ 1.14
CHMP3-203ENST00000409225 BRPF1P55201 1214 aaPredicted RBP22.17■■□□□ 1.14
CHMP3-203ENST00000409225 DGKZQ13574 1117 aa22.17■■□□□ 1.14
CHMP3-203ENST00000409225 ZNRF3Q9ULT6 936 aa22.17■■□□□ 1.14
CHMP3-203ENST00000409225 CIAPIN1Q6FI81 312 aa22.16■■□□□ 1.14
CHMP3-203ENST00000409225 ZNF34Q8IZ26 560 aa22.16■■□□□ 1.14
CHMP3-203ENST00000409225 HHIPL1Q96JK4 782 aa22.16■■□□□ 1.14
CHMP3-203ENST00000409225 ATP6V0A2Q9Y487 856 aa22.16■■□□□ 1.14
CHMP3-203ENST00000409225 NLRP3Q96P20 1036 aa22.15■■□□□ 1.14
CHMP3-203ENST00000409225 BCL2L13Q9BXK5 485 aa22.15■■□□□ 1.14
CHMP3-203ENST00000409225 VPS33BQ9H267 617 aa22.15■■□□□ 1.14
CHMP3-203ENST00000409225 PPP1R42Q7Z4L9 355 aa22.14■■□□□ 1.13
CHMP3-203ENST00000409225 SUPT20HQ8NEM7 779 aa22.14■■□□□ 1.13
CHMP3-203ENST00000409225 PCDH10Q9P2E7 1040 aa22.14■■□□□ 1.13
CHMP3-203ENST00000409225 ABCC4O15439 1325 aa22.13■■□□□ 1.13
CHMP3-203ENST00000409225 RAD17O75943 681 aa22.13■■□□□ 1.13
CHMP3-203ENST00000409225 HIRAP54198 1017 aaPredicted RBP22.13■■□□□ 1.13
CHMP3-203ENST00000409225 EIF4A1P60842 406 aaKnown RBP22.13■■□□□ 1.13
CHMP3-203ENST00000409225 GIGYF2Q6Y7W6 1299 aaKnown RBP22.13■■□□□ 1.13
CHMP3-203ENST00000409225 TRPM4Q8TD43 1214 aa22.13■■□□□ 1.13
CHMP3-203ENST00000409225 PNISRQ8TF01 805 aaKnown RBP22.13■■□□□ 1.13
CHMP3-203ENST00000409225 PGAP2Q9UHJ9 254 aa22.13■■□□□ 1.13
CHMP3-203ENST00000409225 KDM3BQ7LBC6 1761 aa22.12■■□□□ 1.13
CHMP3-203ENST00000409225 DPP8Q6V1X1 898 aaPredicted RBP22.12■■□□□ 1.13
CHMP3-203ENST00000409225 ZIC5Q96T25 663 aa22.12■■□□□ 1.13
CHMP3-203ENST00000409225 PPP2R1AP30153 589 aa22.11■■□□□ 1.13
CHMP3-203ENST00000409225 PARP10Q53GL7 1025 aa22.11■■□□□ 1.13
CHMP3-203ENST00000409225 CDC37L1Q7L3B6 337 aa22.11■■□□□ 1.13
CHMP3-203ENST00000409225 ZC3H15Q8WU90 426 aaKnown RBP22.11■■□□□ 1.13
CHMP3-203ENST00000409225 RTFDC1Q9BY42 306 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms