RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 FMR1Q06787 632 aaKnown RBP eCLIP8.34□□□□□ -1.07
RPA3-204ENST00000406109 CCDC93Q567U6 631 aa8.34□□□□□ -1.07
RPA3-204ENST00000406109 LHX8Q68G74 356 aa8.34□□□□□ -1.07
RPA3-204ENST00000406109 USP16Q9Y5T5 823 aa8.34□□□□□ -1.07
RPA3-204ENST00000406109 LTBP1Q14766 1721 aa8.34□□□□□ -1.07
RPA3-204ENST00000406109 CASP8AP2Q9UKL3 1982 aa8.33□□□□□ -1.08
RPA3-204ENST00000406109 COL3A1P02461 1466 aaPredicted RBP8.33□□□□□ -1.08
RPA3-204ENST00000406109 GNAT3A8MTJ3 354 aa8.33□□□□□ -1.08
RPA3-204ENST00000406109 PER1O15534 1290 aaPredicted RBP8.33□□□□□ -1.08
RPA3-204ENST00000406109 DIAPH1O60610 1272 aaKnown RBP8.33□□□□□ -1.08
RPA3-204ENST00000406109 NPR1P16066 1061 aa8.33□□□□□ -1.08
RPA3-204ENST00000406109 CLEC4GQ6UXB4 293 aa8.33□□□□□ -1.08
RPA3-204ENST00000406109 PNMA8AQ86V59 439 aaPredicted RBP8.33□□□□□ -1.08
RPA3-204ENST00000406109 DZIP3Q86Y13 1208 aaKnown RBP8.33□□□□□ -1.08
RPA3-204ENST00000406109 DDX21Q9NR30 783 aaKnown RBP eCLIP8.33□□□□□ -1.08
RPA3-204ENST00000406109 THSD7BQ9C0I4 1608 aa8.32□□□□□ -1.08
RPA3-204ENST00000406109 RANBP2P49792 3224 aaKnown RBP8.32□□□□□ -1.08
RPA3-204ENST00000406109 NBPF26B4DH59 902 aa8.32□□□□□ -1.08
RPA3-204ENST00000406109 IARSP41252 1262 aaKnown RBP8.32□□□□□ -1.08
RPA3-204ENST00000406109 MAP2K1Q02750 393 aaPredicted RBP8.32□□□□□ -1.08
RPA3-204ENST00000406109 CST9Q5W186 159 aa8.32□□□□□ -1.08
RPA3-204ENST00000406109 NBPF10Q6P3W6 841 aaKnown RBP8.32□□□□□ -1.08
RPA3-204ENST00000406109 SLC51AQ86UW1 340 aa8.32□□□□□ -1.08
RPA3-204ENST00000406109 NBPF5PQ86XG9 351 aaPredicted RBP8.32□□□□□ -1.08
RPA3-204ENST00000406109 RTKN2Q8IZC4 609 aa8.32□□□□□ -1.08
RPA3-204ENST00000406109 GPC2Q8N158 579 aa8.32□□□□□ -1.08
RPA3-204ENST00000406109 SYNE4Q8N205 404 aa8.32□□□□□ -1.08
RPA3-204ENST00000406109 NBPF15Q8N660 670 aa8.32□□□□□ -1.08
RPA3-204ENST00000406109 FMNL2Q96PY5 1086 aa8.32□□□□□ -1.08
RPA3-204ENST00000406109 TRPM7Q96QT4 1865 aa8.32□□□□□ -1.08
RPA3-204ENST00000406109 SCNN1DP51172 638 aa8.31□□□□□ -1.08
RPA3-204ENST00000406109 TEFQ10587 303 aa8.31□□□□□ -1.08
RPA3-204ENST00000406109 CC2D1BQ5T0F9 858 aaKnown RBP8.31□□□□□ -1.08
RPA3-204ENST00000406109 PHACTR3Q96KR7 559 aa8.31□□□□□ -1.08
RPA3-204ENST00000406109 BTBD11A6QL63 1104 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 TRAF5O00463 557 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 RGL2O15211 777 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 NPHP1O15259 732 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 EPS15P42566 896 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 MLLT1Q03111 559 aaPredicted RBP8.3□□□□□ -1.08
RPA3-204ENST00000406109 HLFQ16534 295 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 CRY2Q49AN0 593 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 CYP4F22Q6NT55 531 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 TPTE2Q6XPS3 522 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 GAS2L2Q8NHY3 880 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 CAPNS2Q96L46 248 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 GPR101Q96P66 508 aaPredicted RBP8.3□□□□□ -1.08
RPA3-204ENST00000406109 PSMD1Q99460 953 aa8.3□□□□□ -1.08
RPA3-204ENST00000406109 ABT1Q9ULW3 272 aaKnown RBP8.3□□□□□ -1.08
RPA3-204ENST00000406109 NIP7Q9Y221 180 aaKnown RBP eCLIP8.3□□□□□ -1.08
RPA3-204ENST00000406109 CCDC85CA6NKD9 419 aa8.29□□□□□ -1.08
RPA3-204ENST00000406109 ALDH1B1P30837 517 aa8.29□□□□□ -1.08
RPA3-204ENST00000406109 DDX10Q13206 875 aaKnown RBP8.29□□□□□ -1.08
RPA3-204ENST00000406109 TSKSQ9UJT2 592 aa8.29□□□□□ -1.08
RPA3-204ENST00000406109 ABCC12Q96J65 1359 aa8.28□□□□□ -1.08
RPA3-204ENST00000406109 FAM177BA6PVY3 158 aa8.28□□□□□ -1.08
RPA3-204ENST00000406109 AOC2O75106 756 aa8.28□□□□□ -1.08
RPA3-204ENST00000406109 SNRPA1P09661 255 aaKnown RBP8.28□□□□□ -1.08
RPA3-204ENST00000406109 NPM2Q86SE8 214 aaKnown RBP8.28□□□□□ -1.08
RPA3-204ENST00000406109 RSPH6AQ9H0K4 717 aa8.28□□□□□ -1.08
RPA3-204ENST00000406109 ZNF652Q9Y2D9 606 aa8.28□□□□□ -1.08
RPA3-204ENST00000406109 GJA3Q9Y6H8 435 aa8.28□□□□□ -1.08
RPA3-204ENST00000406109 TLL2Q9Y6L7 1015 aa8.28□□□□□ -1.08
RPA3-204ENST00000406109 NUP98P52948 1817 aa8.28□□□□□ -1.08
RPA3-204ENST00000406109 SPDYE4A6NLX3 237 aa8.27□□□□□ -1.09
RPA3-204ENST00000406109 U2SURPO15042 1029 aaKnown RBP8.27□□□□□ -1.09
RPA3-204ENST00000406109 HOXA10P31260 410 aaPredicted RBP8.27□□□□□ -1.09
RPA3-204ENST00000406109 MAP2K2P36507 400 aa8.27□□□□□ -1.09
RPA3-204ENST00000406109 USP50Q70EL3 339 aaPredicted RBP8.27□□□□□ -1.09
RPA3-204ENST00000406109 SAPCD2Q86UD0 394 aa8.27□□□□□ -1.09
RPA3-204ENST00000406109 NUTM1Q86Y26 1132 aa8.27□□□□□ -1.09
RPA3-204ENST00000406109 JDP2Q8WYK2 163 aa8.27□□□□□ -1.09
RPA3-204ENST00000406109 PCDH10Q9P2E7 1040 aa8.27□□□□□ -1.09
RPA3-204ENST00000406109 PRKAR2BP31323 418 aa8.26□□□□□ -1.09
RPA3-204ENST00000406109 ECE1P42892 770 aa8.26□□□□□ -1.09
RPA3-204ENST00000406109 EIF6P56537 245 aaKnown RBP8.26□□□□□ -1.09
RPA3-204ENST00000406109 C3orf67Q6ZVT6 689 aa8.26□□□□□ -1.09
RPA3-204ENST00000406109 MCM10Q7L590 875 aa8.26□□□□□ -1.09
RPA3-204ENST00000406109 MCOLN1Q9GZU1 580 aa8.26□□□□□ -1.09
RPA3-204ENST00000406109 POLR2AP24928 1970 aaKnown RBP8.26□□□□□ -1.09
RPA3-204ENST00000406109 COL6A3P12111 3177 aa8.26□□□□□ -1.09
RPA3-204ENST00000406109 NPC1L1Q9UHC9 1359 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 LAMA3Q16787 3333 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 ZNF316A6NFI3 1004 aaPredicted RBP8.25□□□□□ -1.09
RPA3-204ENST00000406109 CLCN6P51797 869 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 GRM1Q13255 1194 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 DCTN1Q14203 1278 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 CC2D2BQ6DHV5 1058 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 LARGE2Q8N3Y3 721 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 ZNF579Q8NAF0 562 aaKnown RBP8.25□□□□□ -1.09
RPA3-204ENST00000406109 ZIC5Q96T25 663 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 BEGAINQ9BUH8 593 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 GPRC5DQ9NZD1 345 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 PGAP2Q9UHJ9 254 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 UBN2Q6ZU65 1347 aa8.25□□□□□ -1.09
RPA3-204ENST00000406109 RIC1Q4ADV7 1423 aa8.24□□□□□ -1.09
RPA3-204ENST00000406109 ERVV-1B6SEH8 477 aa8.24□□□□□ -1.09
RPA3-204ENST00000406109 CELF2O95319 508 aaKnown RBP8.24□□□□□ -1.09
RPA3-204ENST00000406109 LMOD1P29536 600 aaPredicted RBP8.24□□□□□ -1.09
RPA3-204ENST00000406109 HIRAP54198 1017 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms