RNA–Protein interactions for RNA: ENST00000402412.5

R3HDM2-204, Transcript of R3H domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-204ENST00000402412 ANKRD1Q15327 319 aa16.07■□□□□ 0.16
R3HDM2-204ENST00000402412 ODF2Q5BJF6 829 aa16.07■□□□□ 0.16
R3HDM2-204ENST00000402412 XRCC6P12956 609 aaKnown RBP eCLIP16.06■□□□□ 0.16
R3HDM2-204ENST00000402412 C8orf34Q49A92 452 aa16.06■□□□□ 0.16
R3HDM2-204ENST00000402412 CCAR1Q8IX12 1150 aaKnown RBP16.06■□□□□ 0.16
R3HDM2-204ENST00000402412 JMYQ8N9B5 988 aa16.06■□□□□ 0.16
R3HDM2-204ENST00000402412 DEF6Q9H4E7 631 aa16.06■□□□□ 0.16
R3HDM2-204ENST00000402412 ACEP12821 1306 aa16.06■□□□□ 0.16
R3HDM2-204ENST00000402412 FAM135BQ49AJ0 1406 aa16.06■□□□□ 0.16
R3HDM2-204ENST00000402412 SPDYE4A6NLX3 237 aa16.06■□□□□ 0.16
R3HDM2-204ENST00000402412 TRMT112Q9UI30 125 aaKnown RBP16.06■□□□□ 0.16
R3HDM2-204ENST00000402412 IGSF3O75054 1194 aa16.06■□□□□ 0.16
R3HDM2-204ENST00000402412 GJB2P29033 226 aa16.06■□□□□ 0.16
R3HDM2-204ENST00000402412 H0YHG0 523 aa16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 TXLNAP40222 546 aa16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 ZFP91Q96JP5 570 aaPredicted RBP16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 CHPF2Q9P2E5 772 aa16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 MAGEC2Q9UBF1 373 aaPredicted RBP16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 CFAP45Q9UL16 551 aa16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 BRF1Q92994 677 aa16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 TMX3Q96JJ7 454 aa16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 DLC1Q96QB1 1528 aa16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 LETM1O95202 739 aaPredicted RBP16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 VAT1LQ9HCJ6 419 aa16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 SEPT11Q9NVA2 429 aaKnown RBP16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 LIMCH1Q9UPQ0 1083 aa16.05■□□□□ 0.16
R3HDM2-204ENST00000402412 IMMTQ16891 758 aaKnown RBP16.04■□□□□ 0.16
R3HDM2-204ENST00000402412 LARP1Q6PKG0 1096 aaKnown RBP16.04■□□□□ 0.16
R3HDM2-204ENST00000402412 TULP4Q9NRJ4 1543 aa16.04■□□□□ 0.16
R3HDM2-204ENST00000402412 C8orf76Q96K31 380 aa16.04■□□□□ 0.16
R3HDM2-204ENST00000402412 TSPYL1Q9H0U9 437 aa16.04■□□□□ 0.16
R3HDM2-204ENST00000402412 URI1O94763 535 aaPredicted RBP16.04■□□□□ 0.16
R3HDM2-204ENST00000402412 NAPBQ9H115 298 aa16.04■□□□□ 0.16
R3HDM2-204ENST00000402412 TTC12Q9H892 705 aaPredicted RBP16.04■□□□□ 0.16
R3HDM2-204ENST00000402412 PPIP5K1Q6PFW1 1433 aa16.04■□□□□ 0.16
R3HDM2-204ENST00000402412 CWF19L2Q2TBE0 894 aaKnown RBP16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 LDHAL6AQ6ZMR3 332 aa16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 CHMP4BP1P59074 171 aa16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 TMEM132AQ24JP5 1023 aa16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 ECHDC1Q9NTX5 307 aa16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 GNL3LQ9NVN8 582 aaKnown RBP16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 V9GYY5 206 aaPredicted RBP16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 FAM173BQ6P4H8 233 aa16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 ARHGEF28Q8N1W1 1705 aaKnown RBP16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 ALDH1L2Q3SY69 923 aa16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 BMP2KLQ5H9B9 411 aa16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 HELBQ8NG08 1087 aaPredicted RBP16.03■□□□□ 0.16
R3HDM2-204ENST00000402412 RIMS1Q86UR5 1692 aaKnown RBP16.02■□□□□ 0.16
R3HDM2-204ENST00000402412 FSIP1Q8NA03 581 aa16.02■□□□□ 0.16
R3HDM2-204ENST00000402412 DBF4Q9UBU7 674 aaPredicted RBP16.02■□□□□ 0.16
R3HDM2-204ENST00000402412 CNPY2Q9Y2B0 182 aa16.02■□□□□ 0.16
R3HDM2-204ENST00000402412 ROBO2Q9HCK4 1378 aa16.02■□□□□ 0.16
R3HDM2-204ENST00000402412 GOLGA8BA8MQT2 603 aa16.02■□□□□ 0.16
R3HDM2-204ENST00000402412 STX6O43752 255 aa16.02■□□□□ 0.15
R3HDM2-204ENST00000402412 ADCY5O95622 1261 aa16.02■□□□□ 0.15
R3HDM2-204ENST00000402412 IFIT5Q13325 482 aaKnown RBP16.02■□□□□ 0.15
R3HDM2-204ENST00000402412 CNKSR2Q8WXI2 1034 aa16.02■□□□□ 0.15
R3HDM2-204ENST00000402412 C3P01024 1663 aa16.02■□□□□ 0.15
R3HDM2-204ENST00000402412 COPS6Q7L5N1 327 aa16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 RHPN1Q8TCX5 695 aa16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 PDCL3Q9H2J4 239 aa16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 JAG2Q9Y219 1238 aa16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 U3KPZ7 1027 aaPredicted RBP16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 ADAMTS13Q76LX8 1427 aa16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 POLR3GO15318 223 aaPredicted RBP16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 KCNA6P17658 529 aa16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 ZSCAN31Q96LW9 406 aaPredicted RBP16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 MPHOSPH10O00566 681 aaKnown RBP16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 EIF5P55010 431 aaKnown RBP16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 NDUFB9Q9Y6M9 179 aa16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 TTC22Q5TAA0 569 aa16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 ZHX1Q9UKY1 873 aaPredicted RBP16.01■□□□□ 0.15
R3HDM2-204ENST00000402412 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
R3HDM2-204ENST00000402412 ZNF165P49910 485 aa16■□□□□ 0.15
R3HDM2-204ENST00000402412 PDCL2Q8N4E4 241 aa16■□□□□ 0.15
R3HDM2-204ENST00000402412 TMOD3Q9NYL9 352 aa16■□□□□ 0.15
R3HDM2-204ENST00000402412 POLKQ9UBT6 870 aa16■□□□□ 0.15
R3HDM2-204ENST00000402412 USP16Q9Y5T5 823 aa16■□□□□ 0.15
R3HDM2-204ENST00000402412 UBR1Q8IWV7 1749 aa16■□□□□ 0.15
R3HDM2-204ENST00000402412 SFPQP23246 707 aaKnown RBP eCLIP16■□□□□ 0.15
R3HDM2-204ENST00000402412 PDE1AP54750 535 aa16■□□□□ 0.15
R3HDM2-204ENST00000402412 SOGA3Q5TF21 947 aa16■□□□□ 0.15
R3HDM2-204ENST00000402412 G2E3Q7L622 706 aa16■□□□□ 0.15
R3HDM2-204ENST00000402412 KLHDC4Q8TBB5 520 aa16■□□□□ 0.15
R3HDM2-204ENST00000402412 CTNNA3Q9UI47 895 aa16■□□□□ 0.15
R3HDM2-204ENST00000402412 SLC3A2P08195 630 aaKnown RBP15.99■□□□□ 0.15
R3HDM2-204ENST00000402412 TAX1BP1Q86VP1 789 aa15.99■□□□□ 0.15
R3HDM2-204ENST00000402412 UBXN4Q92575 508 aa15.99■□□□□ 0.15
R3HDM2-204ENST00000402412 CCDC102AQ96A19 550 aa15.99■□□□□ 0.15
R3HDM2-204ENST00000402412 CHAMP1Q96JM3 812 aa15.99■□□□□ 0.15
R3HDM2-204ENST00000402412 ZNHIT6Q9NWK9 470 aaKnown RBP15.99■□□□□ 0.15
R3HDM2-204ENST00000402412 ZNF213O14771 459 aa15.99■□□□□ 0.15
R3HDM2-204ENST00000402412 RXRAP19793 462 aa15.99■□□□□ 0.15
R3HDM2-204ENST00000402412 IGHMBP2P38935 993 aaKnown RBP15.99■□□□□ 0.15
R3HDM2-204ENST00000402412 ARHGAP29Q52LW3 1261 aa15.99■□□□□ 0.15
R3HDM2-204ENST00000402412 SMARCE1Q969G3 411 aa15.99■□□□□ 0.15
R3HDM2-204ENST00000402412 PHAXQ9H814 394 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms