RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 SYT1P21579 422 aa20.63■□□□□ 0.89
SNED1-204ENST00000401884 HSP90AB3PQ58FF7 597 aa20.63■□□□□ 0.89
SNED1-204ENST00000401884 USP19O94966 1318 aa20.63■□□□□ 0.89
SNED1-204ENST00000401884 NAP1L1P55209 391 aaKnown RBP20.63■□□□□ 0.89
SNED1-204ENST00000401884 ZSCAN16Q9H4T2 348 aaPredicted RBP20.63■□□□□ 0.89
SNED1-204ENST00000401884 BABAM1Q9NWV8 329 aa20.63■□□□□ 0.89
SNED1-204ENST00000401884 KAT6BQ8WYB5 2073 aa20.63■□□□□ 0.89
SNED1-204ENST00000401884 POLR3DP05423 398 aaPredicted RBP20.63■□□□□ 0.89
SNED1-204ENST00000401884 PTPN14Q15678 1187 aa20.63■□□□□ 0.89
SNED1-204ENST00000401884 LGR6Q9HBX8 967 aa20.63■□□□□ 0.89
SNED1-204ENST00000401884 DDX21Q9NR30 783 aaKnown RBP eCLIP20.63■□□□□ 0.89
SNED1-204ENST00000401884 MCMDC2Q4G0Z9 681 aa20.62■□□□□ 0.89
SNED1-204ENST00000401884 HSP90B2PQ58FF3 399 aa20.62■□□□□ 0.89
SNED1-204ENST00000401884 ZNF830Q96NB3 372 aaPredicted RBP20.62■□□□□ 0.89
SNED1-204ENST00000401884 DACT1Q9NYF0 836 aa20.62■□□□□ 0.89
SNED1-204ENST00000401884 NBPF7P0C2Y1 421 aaPredicted RBP20.62■□□□□ 0.89
SNED1-204ENST00000401884 CREB3L3Q68CJ9 461 aa20.62■□□□□ 0.89
SNED1-204ENST00000401884 NUTM2BA6NNL0 878 aaPredicted RBP20.62■□□□□ 0.89
SNED1-204ENST00000401884 NUTM2EB1AL46 878 aaPredicted RBP20.62■□□□□ 0.89
SNED1-204ENST00000401884 RNMTO43148 476 aaKnown RBP20.62■□□□□ 0.89
SNED1-204ENST00000401884 RAB11FIP4Q86YS3 637 aa20.62■□□□□ 0.89
SNED1-204ENST00000401884 NUTM2AQ8IVF1 878 aaPredicted RBP20.62■□□□□ 0.89
SNED1-204ENST00000401884 KIAA0232Q92628 1395 aa20.61■□□□□ 0.89
SNED1-204ENST00000401884 ZKSCAN5Q9Y2L8 839 aa20.61■□□□□ 0.89
SNED1-204ENST00000401884 BICDL1Q6ZP65 573 aa20.61■□□□□ 0.89
SNED1-204ENST00000401884 PIBF1Q8WXW3 757 aa20.61■□□□□ 0.89
SNED1-204ENST00000401884 PDCL2Q8N4E4 241 aa20.61■□□□□ 0.89
SNED1-204ENST00000401884 IFIT3O14879 490 aaKnown RBP20.61■□□□□ 0.89
SNED1-204ENST00000401884 CCAR1Q8IX12 1150 aaKnown RBP20.61■□□□□ 0.89
SNED1-204ENST00000401884 C16orf45Q96MC5 204 aaPredicted RBP20.61■□□□□ 0.89
SNED1-204ENST00000401884 BIN1O00499 593 aa20.6■□□□□ 0.89
SNED1-204ENST00000401884 CCDC196A0A1B0GTZ2 297 aa20.6■□□□□ 0.89
SNED1-204ENST00000401884 BICC1Q9H694 974 aaKnown RBP20.6■□□□□ 0.89
SNED1-204ENST00000401884 MAGEC2Q9UBF1 373 aaPredicted RBP20.6■□□□□ 0.89
SNED1-204ENST00000401884 YEATS2Q9ULM3 1422 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 Q6ZUG5 572 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 SLC12A7Q9Y666 1083 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 CABLES1Q8TDN4 633 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 RTL1A6NKG5 1358 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 SGSM2O43147 1006 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 OFD1O75665 1012 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 CAVIN2O95810 425 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 HOXB7P09629 217 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 CDC42BPAQ5VT25 1732 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 IL15P40933 162 aaPredicted RBP20.59■□□□□ 0.89
SNED1-204ENST00000401884 MICU3Q86XE3 530 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 FAM200AQ8TCP9 573 aa20.59■□□□□ 0.89
SNED1-204ENST00000401884 TEX13AQ9BXU3 409 aaPredicted RBP20.59■□□□□ 0.89
SNED1-204ENST00000401884 CCDC171Q6TFL3 1326 aa20.58■□□□□ 0.89
SNED1-204ENST00000401884 NEO1Q92859 1461 aa20.58■□□□□ 0.89
SNED1-204ENST00000401884 TNNT1P13805 278 aa20.58■□□□□ 0.89
SNED1-204ENST00000401884 NCOA7Q8NI08 942 aa20.58■□□□□ 0.89
SNED1-204ENST00000401884 TTC12Q9H892 705 aaPredicted RBP20.58■□□□□ 0.89
SNED1-204ENST00000401884 RRAGDQ9NQL2 400 aaPredicted RBP20.58■□□□□ 0.88
SNED1-204ENST00000401884 GOLGA8AA7E2F4 631 aa20.57■□□□□ 0.88
SNED1-204ENST00000401884 STX1AQ16623 288 aa20.57■□□□□ 0.88
SNED1-204ENST00000401884 SAMD1Q6SPF0 538 aaPredicted RBP20.57■□□□□ 0.88
SNED1-204ENST00000401884 ZCRB1Q8TBF4 217 aaKnown RBP20.57■□□□□ 0.88
SNED1-204ENST00000401884 CDK5RAP3Q96JB5 506 aa20.57■□□□□ 0.88
SNED1-204ENST00000401884 KIF24Q5T7B8 1368 aa20.57■□□□□ 0.88
SNED1-204ENST00000401884 IARSP41252 1262 aaKnown RBP20.57■□□□□ 0.88
SNED1-204ENST00000401884 ACBD3Q9H3P7 528 aa20.57■□□□□ 0.88
SNED1-204ENST00000401884 SIRT1Q96EB6 747 aa20.57■□□□□ 0.88
SNED1-204ENST00000401884 USP44Q9H0E7 712 aa20.57■□□□□ 0.88
SNED1-204ENST00000401884 RBSNQ9H1K0 784 aa20.57■□□□□ 0.88
SNED1-204ENST00000401884 TRMT1Q9NXH9 659 aaKnown RBP20.57■□□□□ 0.88
SNED1-204ENST00000401884 KLF18A0A0U1RQI7 1052 aa20.57■□□□□ 0.88
SNED1-204ENST00000401884 SLC5A1P13866 664 aa20.57■□□□□ 0.88
SNED1-204ENST00000401884 RUFY3Q7L099 469 aa20.57■□□□□ 0.88
SNED1-204ENST00000401884 KIF18AQ8NI77 898 aa20.56■□□□□ 0.88
SNED1-204ENST00000401884 CEP131Q9UPN4 1083 aa20.56■□□□□ 0.88
SNED1-204ENST00000401884 NPHP3Q7Z494 1330 aa20.56■□□□□ 0.88
SNED1-204ENST00000401884 STIM1Q13586 685 aa20.56■□□□□ 0.88
SNED1-204ENST00000401884 CCDC144CPQ8IYA2 1237 aa20.56■□□□□ 0.88
SNED1-204ENST00000401884 PDCL3Q9H2J4 239 aa20.56■□□□□ 0.88
SNED1-204ENST00000401884 KIF2AO00139 706 aaPredicted RBP20.56■□□□□ 0.88
SNED1-204ENST00000401884 LTKP29376 864 aa20.56■□□□□ 0.88
SNED1-204ENST00000401884 CAGE1Q8TC20 777 aa20.56■□□□□ 0.88
SNED1-204ENST00000401884 ZFYP08048 801 aaPredicted RBP20.55■□□□□ 0.88
SNED1-204ENST00000401884 HS1BP3Q53T59 392 aa20.55■□□□□ 0.88
SNED1-204ENST00000401884 IL17REQ8NFR9 667 aa20.55■□□□□ 0.88
SNED1-204ENST00000401884 ANO6Q4KMQ2 910 aa20.55■□□□□ 0.88
SNED1-204ENST00000401884 NBPF6Q5VWK0 638 aa20.55■□□□□ 0.88
SNED1-204ENST00000401884 NBPF4Q96M43 638 aa20.55■□□□□ 0.88
SNED1-204ENST00000401884 TFCP2Q12800 502 aa20.55■□□□□ 0.88
SNED1-204ENST00000401884 KLHL10Q6JEL2 608 aa20.55■□□□□ 0.88
SNED1-204ENST00000401884 CNNM3Q8NE01 707 aa20.55■□□□□ 0.88
SNED1-204ENST00000401884 UBXN4Q92575 508 aa20.55■□□□□ 0.88
SNED1-204ENST00000401884 SNX14Q9Y5W7 946 aa20.55■□□□□ 0.88
SNED1-204ENST00000401884 IKQ13123 557 aaPredicted RBP20.54■□□□□ 0.88
SNED1-204ENST00000401884 TTF1Q15361 905 aaPredicted RBP20.54■□□□□ 0.88
SNED1-204ENST00000401884 MEX3CQ5U5Q3 659 aaKnown RBP20.54■□□□□ 0.88
SNED1-204ENST00000401884 ZNHIT6Q9NWK9 470 aaKnown RBP20.54■□□□□ 0.88
SNED1-204ENST00000401884 TMEM2Q9UHN6 1383 aa20.54■□□□□ 0.88
SNED1-204ENST00000401884 RANBP6O60518 1105 aaKnown RBP20.54■□□□□ 0.88
SNED1-204ENST00000401884 NOLC1Q14978 699 aaKnown RBP eCLIP20.54■□□□□ 0.88
SNED1-204ENST00000401884 CAVIN4Q5BKX8 364 aa20.54■□□□□ 0.88
SNED1-204ENST00000401884 TMEM67Q5HYA8 995 aa20.54■□□□□ 0.88
SNED1-204ENST00000401884 KLHDC4Q8TBB5 520 aa20.54■□□□□ 0.88
SNED1-204ENST00000401884 PAG1Q9NWQ8 432 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms