RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 UBE2HP62256 183 aa15.08■□□□□ 0
PPP4R1-202ENST00000400555 CCT2P78371 535 aaKnown RBP15.08■□□□□ 0
PPP4R1-202ENST00000400555 KRT28Q7Z3Y7 464 aa15.08■□□□□ 0
PPP4R1-202ENST00000400555 TPCN1Q9ULQ1 816 aa15.08■□□□□ 0
PPP4R1-202ENST00000400555 HDAC5Q9UQL6 1122 aa15.08■□□□□ 0
PPP4R1-202ENST00000400555 ANKRD26Q9UPS8 1709 aa15.08■□□□□ 0
PPP4R1-202ENST00000400555 A0A087WZG4 1122 aa15.08■□□□□ 0
PPP4R1-202ENST00000400555 RRP9O43818 475 aaKnown RBP15.08■□□□□ 0
PPP4R1-202ENST00000400555 POLA2Q14181 598 aa15.08■□□□□ 0
PPP4R1-202ENST00000400555 CDC37L1Q7L3B6 337 aa15.08■□□□□ 0
PPP4R1-202ENST00000400555 HYPKQ9NX55 129 aa15.08■□□□□ 0
PPP4R1-202ENST00000400555 KRT85P78386 507 aa15.07■□□□□ 0
PPP4R1-202ENST00000400555 CCDC171Q6TFL3 1326 aa15.07■□□□□ 0
PPP4R1-202ENST00000400555 PSMA5P28066 241 aa15.07■□□□□ 0
PPP4R1-202ENST00000400555 UBE2Q2Q8WVN8 375 aa15.07■□□□□ 0
PPP4R1-202ENST00000400555 SPATA32Q96LK8 384 aa15.07■□□□□ 0
PPP4R1-202ENST00000400555 SNRKQ9NRH2 765 aa15.07■□□□□ 0
PPP4R1-202ENST00000400555 USP16Q9Y5T5 823 aa15.07■□□□□ 0
PPP4R1-202ENST00000400555 SASH1O94885 1247 aa15.07■□□□□ 0
PPP4R1-202ENST00000400555 CSPP1Q1MSJ5 1256 aa15.07■□□□□ 0
PPP4R1-202ENST00000400555 JAK2O60674 1132 aa15.06■□□□□ 0
PPP4R1-202ENST00000400555 TFCP2Q12800 502 aa15.06■□□□□ 0
PPP4R1-202ENST00000400555 LINS1Q8NG48 757 aa15.06■□□□□ 0
PPP4R1-202ENST00000400555 KDRP35968 1356 aa15.06■□□□□ 0
PPP4R1-202ENST00000400555 AMOTQ4VCS5 1084 aa15.06■□□□□ 0
PPP4R1-202ENST00000400555 ZNF589Q86UQ0 364 aaPredicted RBP15.06■□□□□ 0
PPP4R1-202ENST00000400555 ZNF592Q92610 1267 aa15.06■□□□□ 0
PPP4R1-202ENST00000400555 TNMDQ9H2S6 317 aa15.06■□□□□ 0
PPP4R1-202ENST00000400555 EPHA10Q5JZY3 1008 aa15.06■□□□□ 0
PPP4R1-202ENST00000400555 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
PPP4R1-202ENST00000400555 TRIM5Q9C035 493 aa15.06■□□□□ 0
PPP4R1-202ENST00000400555 SLC27A2O14975 620 aa15.05■□□□□ 0
PPP4R1-202ENST00000400555 ZNF496Q96IT1 587 aaPredicted RBP15.05■□□□□ 0
PPP4R1-202ENST00000400555 ZBTB3Q9H5J0 574 aa15.05■□□□□ 0
PPP4R1-202ENST00000400555 TATP17735 454 aaPredicted RBP15.05■□□□□ -0
PPP4R1-202ENST00000400555 ANKRD13DQ6ZTN6 518 aa15.05■□□□□ -0
PPP4R1-202ENST00000400555 DACT1Q9NYF0 836 aa15.05■□□□□ -0
PPP4R1-202ENST00000400555 MTMR6Q9Y217 621 aa15.05■□□□□ -0
PPP4R1-202ENST00000400555 GOLIM4O00461 696 aa15.05■□□□□ -0
PPP4R1-202ENST00000400555 FKBP4Q02790 459 aaKnown RBP eCLIP15.05■□□□□ -0
PPP4R1-202ENST00000400555 HSP90AB3PQ58FF7 597 aa15.05■□□□□ -0
PPP4R1-202ENST00000400555 LUZP1Q86V48 1076 aa15.05■□□□□ -0
PPP4R1-202ENST00000400555 NUP62CLQ9H1M0 184 aa15.05■□□□□ -0
PPP4R1-202ENST00000400555 A0A087WWV3 80 aa15.04■□□□□ -0
PPP4R1-202ENST00000400555 TIMM10P62072 90 aa15.04■□□□□ -0
PPP4R1-202ENST00000400555 BRF1Q92994 677 aa15.04■□□□□ -0
PPP4R1-202ENST00000400555 DBNDD2Q9BQY9 259 aa15.04■□□□□ -0
PPP4R1-202ENST00000400555 LIG1P18858 919 aa15.04■□□□□ -0
PPP4R1-202ENST00000400555 ZSCAN31Q96LW9 406 aaPredicted RBP15.04■□□□□ -0
PPP4R1-202ENST00000400555 PRDM10Q9NQV6 1147 aa15.04■□□□□ -0
PPP4R1-202ENST00000400555 SPATA31D1Q6ZQQ2 1576 aa15.04■□□□□ -0
PPP4R1-202ENST00000400555 ADCY9O60503 1353 aa15.04■□□□□ -0
PPP4R1-202ENST00000400555 CCDC192P0DO97 292 aa15.04■□□□□ -0
PPP4R1-202ENST00000400555 CABP4P57796 275 aa15.04■□□□□ -0
PPP4R1-202ENST00000400555 TTC41PQ6P2S7 1318 aa15.04■□□□□ -0
PPP4R1-202ENST00000400555 WASHC4Q2M389 1173 aa15.03■□□□□ -0
PPP4R1-202ENST00000400555 LMBR1LQ6UX01 489 aa15.03■□□□□ -0
PPP4R1-202ENST00000400555 ERCC4Q92889 916 aaPredicted RBP15.03■□□□□ -0
PPP4R1-202ENST00000400555 HAND2P61296 217 aa15.03■□□□□ -0
PPP4R1-202ENST00000400555 TAF7LQ5H9L4 462 aa15.03■□□□□ -0
PPP4R1-202ENST00000400555 ZNF790Q6PG37 636 aa15.03■□□□□ -0
PPP4R1-202ENST00000400555 STK11IPQ8N1F8 1099 aa15.03■□□□□ -0
PPP4R1-202ENST00000400555 ALDH1L1O75891 902 aa15.03■□□□□ -0
PPP4R1-202ENST00000400555 VPS53Q5VIR6 699 aa15.03■□□□□ -0
PPP4R1-202ENST00000400555 TTC14Q96N46 770 aa15.03■□□□□ -0
PPP4R1-202ENST00000400555 FMNL2Q96PY5 1086 aa15.03■□□□□ -0
PPP4R1-202ENST00000400555 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.03■□□□□ -0
PPP4R1-202ENST00000400555 SASS6Q6UVJ0 657 aa15.02■□□□□ -0
PPP4R1-202ENST00000400555 DDX21Q9NR30 783 aaKnown RBP eCLIP15.02■□□□□ -0
PPP4R1-202ENST00000400555 TTC6Q86TZ1 520 aa15.02■□□□□ -0
PPP4R1-202ENST00000400555 SH2B1Q9NRF2 756 aaPredicted RBP15.02■□□□□ -0
PPP4R1-202ENST00000400555 TECPR2O15040 1411 aa15.02□□□□□ -0.01
PPP4R1-202ENST00000400555 MAP3K11Q16584 847 aa15.02□□□□□ -0.01
PPP4R1-202ENST00000400555 Q6ZUG5 572 aa15.02□□□□□ -0.01
PPP4R1-202ENST00000400555 ZNF594Q96JF6 807 aaPredicted RBP15.02□□□□□ -0.01
PPP4R1-202ENST00000400555 KAT6BQ8WYB5 2073 aa15.02□□□□□ -0.01
PPP4R1-202ENST00000400555 CHAF1AQ13111 956 aaPredicted RBP15.01□□□□□ -0.01
PPP4R1-202ENST00000400555 ZRSR1Q15695 479 aaKnown RBP15.01□□□□□ -0.01
PPP4R1-202ENST00000400555 PDLIM2Q96JY6 352 aa15.01□□□□□ -0.01
PPP4R1-202ENST00000400555 NOLC1Q14978 699 aaKnown RBP eCLIP15.01□□□□□ -0.01
PPP4R1-202ENST00000400555 IGKV5-2P06315 115 aa15.01□□□□□ -0.01
PPP4R1-202ENST00000400555 NCOA5Q9HCD5 579 aaKnown RBP15.01□□□□□ -0.01
PPP4R1-202ENST00000400555 STRN4Q9NRL3 753 aa15.01□□□□□ -0.01
PPP4R1-202ENST00000400555 RPAP1Q9BWH6 1393 aaPredicted RBP15□□□□□ -0.01
PPP4R1-202ENST00000400555 AOX1Q06278 1338 aa15□□□□□ -0.01
PPP4R1-202ENST00000400555 PDCP20941 246 aa15□□□□□ -0.01
PPP4R1-202ENST00000400555 HIP1O00291 1037 aa15□□□□□ -0.01
PPP4R1-202ENST00000400555 NEK1Q96PY6 1258 aa15□□□□□ -0.01
PPP4R1-202ENST00000400555 ZSWIM6Q9HCJ5 1215 aa15□□□□□ -0.01
PPP4R1-202ENST00000400555 ATF3P18847 181 aa15□□□□□ -0.01
PPP4R1-202ENST00000400555 SF3A1Q15459 793 aaKnown RBP15□□□□□ -0.01
PPP4R1-202ENST00000400555 ANO6Q4KMQ2 910 aa15□□□□□ -0.01
PPP4R1-202ENST00000400555 SIPA1L2Q9P2F8 1722 aaPredicted RBP15□□□□□ -0.01
PPP4R1-202ENST00000400555 GCKRQ14397 625 aa14.99□□□□□ -0.01
PPP4R1-202ENST00000400555 ZMYND15Q9H091 742 aa14.99□□□□□ -0.01
PPP4R1-202ENST00000400555 ITSN1Q15811 1721 aa14.99□□□□□ -0.01
PPP4R1-202ENST00000400555 RIMBP3CA6NJZ7 1639 aa14.99□□□□□ -0.01
PPP4R1-202ENST00000400555 RIMBP3BA6NNM3 1639 aa14.99□□□□□ -0.01
PPP4R1-202ENST00000400555 RIMBP3Q9UFD9 1639 aa14.99□□□□□ -0.01
PPP4R1-202ENST00000400555 BECN2A8MW95 431 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 217.1 ms