RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 ATP5J2-PTCD1G3V325 749 aa19.05■□□□□ 0.64
CDC42-203ENST00000400259 HIP1O00291 1037 aa19.05■□□□□ 0.64
CDC42-203ENST00000400259 PTCD1O75127 700 aaKnown RBP19.05■□□□□ 0.64
CDC42-203ENST00000400259 SKOR2Q2VWA4 1001 aaPredicted RBP19.05■□□□□ 0.64
CDC42-203ENST00000400259 CWC27Q6UX04 472 aaKnown RBP19.05■□□□□ 0.64
CDC42-203ENST00000400259 KIAA1211Q6ZU35 1233 aa19.05■□□□□ 0.64
CDC42-203ENST00000400259 GZF1Q9H116 711 aaPredicted RBP19.05■□□□□ 0.64
CDC42-203ENST00000400259 SIL1Q9H173 461 aa19.05■□□□□ 0.64
CDC42-203ENST00000400259 ZGPATQ8N5A5 531 aaKnown RBP19.05■□□□□ 0.64
CDC42-203ENST00000400259 KLHDC4Q8TBB5 520 aa19.05■□□□□ 0.64
CDC42-203ENST00000400259 INTS4Q96HW7 963 aaKnown RBP19.05■□□□□ 0.64
CDC42-203ENST00000400259 SNRKQ9NRH2 765 aa19.05■□□□□ 0.64
CDC42-203ENST00000400259 TTLL7Q6ZT98 887 aa19.04■□□□□ 0.64
CDC42-203ENST00000400259 A1BGP04217 495 aa19.04■□□□□ 0.64
CDC42-203ENST00000400259 CCDC8Q9H0W5 538 aaPredicted RBP19.04■□□□□ 0.64
CDC42-203ENST00000400259 CWC25Q9NXE8 425 aaPredicted RBP19.04■□□□□ 0.64
CDC42-203ENST00000400259 TMOD3Q9NYL9 352 aa19.04■□□□□ 0.64
CDC42-203ENST00000400259 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.03■□□□□ 0.64
CDC42-203ENST00000400259 BAG4O95429 457 aaKnown RBP19.03■□□□□ 0.64
CDC42-203ENST00000400259 VSIG10Q8N0Z9 540 aa19.03■□□□□ 0.64
CDC42-203ENST00000400259 TLR7Q9NYK1 1049 aaKnown RBP19.03■□□□□ 0.64
CDC42-203ENST00000400259 SNX14Q9Y5W7 946 aa19.03■□□□□ 0.64
CDC42-203ENST00000400259 FOXO4P98177 505 aa19.03■□□□□ 0.64
CDC42-203ENST00000400259 CCDC191Q8NCU4 936 aa19.03■□□□□ 0.64
CDC42-203ENST00000400259 KCNB2Q92953 911 aa19.03■□□□□ 0.64
CDC42-203ENST00000400259 BTG4Q9NY30 223 aa19.03■□□□□ 0.64
CDC42-203ENST00000400259 FSD2A1L4K1 749 aa19.02■□□□□ 0.64
CDC42-203ENST00000400259 GOLGA6L22H0YM25 854 aa19.02■□□□□ 0.64
CDC42-203ENST00000400259 JARID2Q92833 1246 aaPredicted RBP19.02■□□□□ 0.64
CDC42-203ENST00000400259 ARXQ96QS3 562 aa19.02■□□□□ 0.64
CDC42-203ENST00000400259 L1TD1Q5T7N2 865 aaKnown RBP19.02■□□□□ 0.63
CDC42-203ENST00000400259 TEX13AQ9BXU3 409 aaPredicted RBP19.02■□□□□ 0.63
CDC42-203ENST00000400259 TNNI3KQ59H18 835 aa19.01■□□□□ 0.63
CDC42-203ENST00000400259 FPGT-TNNI3KV9GXZ4 949 aa19.01■□□□□ 0.63
CDC42-203ENST00000400259 RFX7Q2KHR2 1363 aa19■□□□□ 0.63
CDC42-203ENST00000400259 ATP5JP18859 108 aa19■□□□□ 0.63
CDC42-203ENST00000400259 TTC14Q96N46 770 aa19■□□□□ 0.63
CDC42-203ENST00000400259 UPF3BQ9BZI7 483 aaKnown RBP19■□□□□ 0.63
CDC42-203ENST00000400259 ANKRD36CQ5JPF3 1778 aa19■□□□□ 0.63
CDC42-203ENST00000400259 PKP1Q13835 747 aa19■□□□□ 0.63
CDC42-203ENST00000400259 LMBR1LQ6UX01 489 aa19■□□□□ 0.63
CDC42-203ENST00000400259 RASEFQ8IZ41 740 aa18.99■□□□□ 0.63
CDC42-203ENST00000400259 ZDHHC9Q9Y397 364 aa18.99■□□□□ 0.63
CDC42-203ENST00000400259 CCDC171Q6TFL3 1326 aa18.99■□□□□ 0.63
CDC42-203ENST00000400259 TFCP2Q12800 502 aa18.99■□□□□ 0.63
CDC42-203ENST00000400259 ISCA1Q9BUE6 129 aa18.99■□□□□ 0.63
CDC42-203ENST00000400259 DBNLQ9UJU6 430 aaKnown RBP18.99■□□□□ 0.63
CDC42-203ENST00000400259 JCADQ9P266 1359 aa18.98■□□□□ 0.63
CDC42-203ENST00000400259 PTH1RQ03431 593 aa18.98■□□□□ 0.63
CDC42-203ENST00000400259 PIGBQ92521 554 aa18.98■□□□□ 0.63
CDC42-203ENST00000400259 BOLA2Q9H3K6 86 aa18.98■□□□□ 0.63
CDC42-203ENST00000400259 ISY1Q9ULR0 285 aaKnown RBP18.98■□□□□ 0.63
CDC42-203ENST00000400259 MED23Q9ULK4 1368 aa18.98■□□□□ 0.63
CDC42-203ENST00000400259 TM6SF1Q9BZW5 370 aa18.98■□□□□ 0.63
CDC42-203ENST00000400259 ZBTB3Q9H5J0 574 aa18.98■□□□□ 0.63
CDC42-203ENST00000400259 NRAPQ86VF7 1730 aa18.98■□□□□ 0.63
CDC42-203ENST00000400259 BCL9O00512 1426 aa18.97■□□□□ 0.63
CDC42-203ENST00000400259 TRIM28Q13263 835 aaKnown RBP18.97■□□□□ 0.63
CDC42-203ENST00000400259 NMIQ13287 307 aaPredicted RBP18.97■□□□□ 0.63
CDC42-203ENST00000400259 NECTIN1Q15223 517 aa18.97■□□□□ 0.63
CDC42-203ENST00000400259 GPR108Q9NPR9 543 aa18.97■□□□□ 0.63
CDC42-203ENST00000400259 ATG3Q9NT62 314 aa18.97■□□□□ 0.63
CDC42-203ENST00000400259 SPEF2Q9C093 1822 aa18.97■□□□□ 0.63
CDC42-203ENST00000400259 GOLGA6L3A6NEY3 463 aa18.96■□□□□ 0.63
CDC42-203ENST00000400259 MAP4K1Q92918 833 aa18.96■□□□□ 0.63
CDC42-203ENST00000400259 FSD1Q9BTV5 496 aa18.96■□□□□ 0.63
CDC42-203ENST00000400259 ASAP1Q9ULH1 1129 aa18.96■□□□□ 0.63
CDC42-203ENST00000400259 DOT1LQ8TEK3 1739 aa18.96■□□□□ 0.63
CDC42-203ENST00000400259 TCIRG1Q13488 830 aa18.95■□□□□ 0.62
CDC42-203ENST00000400259 ATG9AQ7Z3C6 839 aa18.95■□□□□ 0.62
CDC42-203ENST00000400259 FAM227BQ96M60 508 aa18.95■□□□□ 0.62
CDC42-203ENST00000400259 KLHL40Q2TBA0 621 aa18.95■□□□□ 0.62
CDC42-203ENST00000400259 MYH3P11055 1940 aa18.95■□□□□ 0.62
CDC42-203ENST00000400259 BRD1O95696 1058 aa18.94■□□□□ 0.62
CDC42-203ENST00000400259 LTBP4Q8N2S1 1624 aa18.94■□□□□ 0.62
CDC42-203ENST00000400259 A0A0D9SFI3 127 aa18.94■□□□□ 0.62
CDC42-203ENST00000400259 CIAO1O76071 339 aa18.94■□□□□ 0.62
CDC42-203ENST00000400259 STARD3NLO95772 234 aa18.94■□□□□ 0.62
CDC42-203ENST00000400259 IL15P40933 162 aaPredicted RBP18.94■□□□□ 0.62
CDC42-203ENST00000400259 DNAJC10Q8IXB1 793 aa18.94■□□□□ 0.62
CDC42-203ENST00000400259 NUP98P52948 1817 aa18.93■□□□□ 0.62
CDC42-203ENST00000400259 PRPF40BQ6NWY9 871 aaKnown RBP18.93■□□□□ 0.62
CDC42-203ENST00000400259 TICAM2Q86XR7 235 aa18.93■□□□□ 0.62
CDC42-203ENST00000400259 HAUS7Q99871 368 aa18.93■□□□□ 0.62
CDC42-203ENST00000400259 ZSWIM6Q9HCJ5 1215 aa18.93■□□□□ 0.62
CDC42-203ENST00000400259 RBM8AQ9Y5S9 174 aaKnown RBP18.93■□□□□ 0.62
CDC42-203ENST00000400259 RPAP1Q9BWH6 1393 aaPredicted RBP18.93■□□□□ 0.62
CDC42-203ENST00000400259 PHLPP1O60346 1717 aa18.93■□□□□ 0.62
CDC42-203ENST00000400259 AK2P54819 239 aa18.93■□□□□ 0.62
CDC42-203ENST00000400259 VPS53Q5VIR6 699 aa18.93■□□□□ 0.62
CDC42-203ENST00000400259 MCTP1Q6DN14 999 aa18.93■□□□□ 0.62
CDC42-203ENST00000400259 DBNDD2Q9BQY9 259 aa18.93■□□□□ 0.62
CDC42-203ENST00000400259 LMBRD1Q9NUN5 540 aa18.93■□□□□ 0.62
CDC42-203ENST00000400259 LIMCH1Q9UPQ0 1083 aa18.93■□□□□ 0.62
CDC42-203ENST00000400259 ZNF609O15014 1411 aa18.92■□□□□ 0.62
CDC42-203ENST00000400259 XRCC6P12956 609 aaKnown RBP eCLIP18.92■□□□□ 0.623e-11■□□□□ 9.2
CDC42-203ENST00000400259 CASTP20810 708 aaKnown RBP18.92■□□□□ 0.62
CDC42-203ENST00000400259 NOL8Q76FK4 1167 aaKnown RBP18.92■□□□□ 0.62
CDC42-203ENST00000400259 RUFY3Q7L099 469 aa18.92■□□□□ 0.62
CDC42-203ENST00000400259 PLA2G12BQ9BX93 195 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms