RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 LRRC24Q50LG9 513 aa16.03■□□□□ 0.16
TOP3B-202ENST00000398793 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
TOP3B-202ENST00000398793 DNAJC2Q99543 621 aaKnown RBP16.03■□□□□ 0.16
TOP3B-202ENST00000398793 CWC25Q9NXE8 425 aaPredicted RBP16.03■□□□□ 0.16
TOP3B-202ENST00000398793 JAG2Q9Y219 1238 aa16.03■□□□□ 0.16
TOP3B-202ENST00000398793 FSD2A1L4K1 749 aa16.03■□□□□ 0.16
TOP3B-202ENST00000398793 WTIPA6NIX2 430 aaPredicted RBP16.03■□□□□ 0.16
TOP3B-202ENST00000398793 GSPT1P15170 499 aaKnown RBP16.03■□□□□ 0.16
TOP3B-202ENST00000398793 PLEKHM2Q8IWE5 1019 aa16.03■□□□□ 0.16
TOP3B-202ENST00000398793 COL18A1P39060 1754 aa16.03■□□□□ 0.16
TOP3B-202ENST00000398793 BRPF1P55201 1214 aaPredicted RBP16.02■□□□□ 0.16
TOP3B-202ENST00000398793 HSP90AB3PQ58FF7 597 aa16.02■□□□□ 0.16
TOP3B-202ENST00000398793 PLBD2Q8NHP8 589 aa16.02■□□□□ 0.16
TOP3B-202ENST00000398793 LARP6Q9BRS8 491 aaKnown RBP16.02■□□□□ 0.16
TOP3B-202ENST00000398793 FAM196AQ6ZSG2 479 aa16.02■□□□□ 0.15
TOP3B-202ENST00000398793 RHPN1Q8TCX5 695 aa16.02■□□□□ 0.15
TOP3B-202ENST00000398793 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.15
TOP3B-202ENST00000398793 NKX1-1Q15270 411 aaPredicted RBP16.01■□□□□ 0.15
TOP3B-202ENST00000398793 TPRNQ4KMQ1 711 aa16.01■□□□□ 0.15
TOP3B-202ENST00000398793 USPL1Q5W0Q7 1092 aa16.01■□□□□ 0.15
TOP3B-202ENST00000398793 FNBP4Q8N3X1 1017 aaPredicted RBP16.01■□□□□ 0.15
TOP3B-202ENST00000398793 APBA3O96018 575 aa16.01■□□□□ 0.15
TOP3B-202ENST00000398793 IFIT2P09913 472 aaKnown RBP16.01■□□□□ 0.15
TOP3B-202ENST00000398793 TFCP2Q12800 502 aa16.01■□□□□ 0.15
TOP3B-202ENST00000398793 GCC1Q96CN9 775 aa16.01■□□□□ 0.15
TOP3B-202ENST00000398793 CCDC87Q9NVE4 849 aa16.01■□□□□ 0.15
TOP3B-202ENST00000398793 FAM13BQ9NYF5 915 aa16.01■□□□□ 0.15
TOP3B-202ENST00000398793 TAF5LO75529 589 aa16■□□□□ 0.15
TOP3B-202ENST00000398793 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
TOP3B-202ENST00000398793 SEC31BQ9NQW1 1179 aa16■□□□□ 0.15
TOP3B-202ENST00000398793 BABAM1Q9NWV8 329 aa16■□□□□ 0.15
TOP3B-202ENST00000398793 KLHL34Q8N239 644 aa16■□□□□ 0.15
TOP3B-202ENST00000398793 HOXB7P09629 217 aa15.99■□□□□ 0.15
TOP3B-202ENST00000398793 SDSP20132 328 aa15.99■□□□□ 0.15
TOP3B-202ENST00000398793 BECN1Q14457 450 aa15.99■□□□□ 0.15
TOP3B-202ENST00000398793 LRP10Q7Z4F1 713 aa15.99■□□□□ 0.15
TOP3B-202ENST00000398793 LRRC4BQ9NT99 713 aa15.99■□□□□ 0.15
TOP3B-202ENST00000398793 MRE11P49959 708 aa15.99■□□□□ 0.15
TOP3B-202ENST00000398793 GORABQ5T7V8 394 aa15.98■□□□□ 0.15
TOP3B-202ENST00000398793 POTEAQ6S8J7 498 aa15.98■□□□□ 0.15
TOP3B-202ENST00000398793 STK11IPQ8N1F8 1099 aa15.98■□□□□ 0.15
TOP3B-202ENST00000398793 PPP1R1BQ9UD71 204 aaPredicted RBP15.98■□□□□ 0.15
TOP3B-202ENST00000398793 INTS5Q6P9B9 1019 aaKnown RBP15.98■□□□□ 0.15
TOP3B-202ENST00000398793 UPF2Q9HAU5 1272 aaKnown RBP15.98■□□□□ 0.15
TOP3B-202ENST00000398793 PRDM10Q9NQV6 1147 aa15.98■□□□□ 0.15
TOP3B-202ENST00000398793 IRS4O14654 1257 aaPredicted RBP15.97■□□□□ 0.15
TOP3B-202ENST00000398793 MX1P20591 662 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 SUSD4Q5VX71 490 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 TBC1D9Q6ZT07 1266 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 GREM2Q9H772 168 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 ATP10DQ9P241 1426 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 COL16A1Q07092 1604 aaPredicted RBP15.97■□□□□ 0.15
TOP3B-202ENST00000398793 PDE1AP54750 535 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 CCDC57Q2TAC2 916 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 CWC27Q6UX04 472 aaKnown RBP15.97■□□□□ 0.15
TOP3B-202ENST00000398793 PI16Q6UXB8 463 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 DEFB132Q7Z7B7 95 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 CLASRPQ8N2M8 674 aaKnown RBP15.97■□□□□ 0.15
TOP3B-202ENST00000398793 AK7Q96M32 723 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 TCIRG1Q13488 830 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 EAF2Q96CJ1 260 aaPredicted RBP15.97■□□□□ 0.15
TOP3B-202ENST00000398793 CNNM1Q9NRU3 951 aa15.97■□□□□ 0.15
TOP3B-202ENST00000398793 NHSL1Q5SYE7 1610 aa15.96■□□□□ 0.15
TOP3B-202ENST00000398793 BCL9O00512 1426 aa15.96■□□□□ 0.15
TOP3B-202ENST00000398793 NCAPD2Q15021 1401 aa15.96■□□□□ 0.15
TOP3B-202ENST00000398793 FAM208AQ9UK61 1670 aaKnown RBP15.96■□□□□ 0.15
TOP3B-202ENST00000398793 FKBP4Q02790 459 aaKnown RBP eCLIP15.96■□□□□ 0.14
TOP3B-202ENST00000398793 ANO2Q9NQ90 1003 aa15.96■□□□□ 0.14
TOP3B-202ENST00000398793 TFCP2L1Q9NZI6 479 aa15.96■□□□□ 0.14
TOP3B-202ENST00000398793 SPATA31A6Q5VVP1 1343 aa15.96■□□□□ 0.14
TOP3B-202ENST00000398793 ZPR1O75312 459 aa15.95■□□□□ 0.14
TOP3B-202ENST00000398793 SASH1O94885 1247 aa15.95■□□□□ 0.14
TOP3B-202ENST00000398793 RFC4P35249 363 aa15.95■□□□□ 0.14
TOP3B-202ENST00000398793 DBNDD2Q9BQY9 259 aa15.95■□□□□ 0.14
TOP3B-202ENST00000398793 GRPEL1Q9HAV7 217 aa15.95■□□□□ 0.14
TOP3B-202ENST00000398793 THRAP3Q9Y2W1 955 aaKnown RBP15.95■□□□□ 0.14
TOP3B-202ENST00000398793 LDHAL6AQ6ZMR3 332 aa15.94■□□□□ 0.14
TOP3B-202ENST00000398793 DDX46Q7L014 1031 aaKnown RBP15.94■□□□□ 0.14
TOP3B-202ENST00000398793 NAP1L2Q9ULW6 460 aaPredicted RBP15.94■□□□□ 0.14
TOP3B-202ENST00000398793 UBN2Q6ZU65 1347 aa15.94■□□□□ 0.14
TOP3B-202ENST00000398793 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.94■□□□□ 0.14
TOP3B-202ENST00000398793 EN1Q05925 392 aaPredicted RBP15.94■□□□□ 0.14
TOP3B-202ENST00000398793 BARGINQ6ZT62 677 aa15.94■□□□□ 0.14
TOP3B-202ENST00000398793 RXRBP28702 533 aa15.94■□□□□ 0.14
TOP3B-202ENST00000398793 TBC1D9BQ66K14 1250 aa15.94■□□□□ 0.14
TOP3B-202ENST00000398793 NLRP10Q86W26 655 aa15.94■□□□□ 0.14
TOP3B-202ENST00000398793 ALDH1L1O75891 902 aa15.93■□□□□ 0.14
TOP3B-202ENST00000398793 C3orf67Q6ZVT6 689 aa15.93■□□□□ 0.14
TOP3B-202ENST00000398793 CDCA7Q9BWT1 371 aaPredicted RBP15.93■□□□□ 0.14
TOP3B-202ENST00000398793 PDGFDQ9GZP0 370 aaPredicted RBP15.93■□□□□ 0.14
TOP3B-202ENST00000398793 MAP3K15Q6ZN16 1313 aa15.93■□□□□ 0.14
TOP3B-202ENST00000398793 SMAP1Q8IYB5 467 aaPredicted RBP15.93■□□□□ 0.14
TOP3B-202ENST00000398793 SSH3Q8TE77 659 aa15.93■□□□□ 0.14
TOP3B-202ENST00000398793 GPR101Q96P66 508 aaPredicted RBP15.93■□□□□ 0.14
TOP3B-202ENST00000398793 RTCBQ9Y3I0 505 aaKnown RBP15.93■□□□□ 0.14
TOP3B-202ENST00000398793 GIGYF2Q6Y7W6 1299 aaKnown RBP15.92■□□□□ 0.14
TOP3B-202ENST00000398793 ARHGEF1Q92888 912 aaKnown RBP15.92■□□□□ 0.14
TOP3B-202ENST00000398793 CHMP4AQ9BY43 222 aa15.92■□□□□ 0.14
TOP3B-202ENST00000398793 IL25Q9H293 177 aa15.92■□□□□ 0.14
TOP3B-202ENST00000398793 ITGA6P23229 1130 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms