RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 KIF6Q6ZMV9 814 aa31.29■■■□□ 2.6
SHARPIN-202ENST00000398712 RUFY2Q8WXA3 655 aa31.29■■■□□ 2.6
SHARPIN-202ENST00000398712 IL17RAQ96F46 866 aa31.29■■■□□ 2.6
SHARPIN-202ENST00000398712 SPATA31A1Q5TZJ5 1347 aa31.28■■■□□ 2.6
SHARPIN-202ENST00000398712 FOXO4P98177 505 aa31.28■■■□□ 2.6
SHARPIN-202ENST00000398712 LMBR1LQ6UX01 489 aa31.28■■■□□ 2.6
SHARPIN-202ENST00000398712 CCDC8Q9H0W5 538 aaPredicted RBP31.28■■■□□ 2.6
SHARPIN-202ENST00000398712 DIAPH3Q9NSV4 1193 aa31.28■■■□□ 2.6
SHARPIN-202ENST00000398712 IL27Q8NEV9 243 aa31.27■■■□□ 2.6
SHARPIN-202ENST00000398712 ISCA1Q9BUE6 129 aa31.27■■■□□ 2.6
SHARPIN-202ENST00000398712 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.27■■■□□ 2.6
SHARPIN-202ENST00000398712 DOT1LQ8TEK3 1739 aa31.27■■■□□ 2.6
SHARPIN-202ENST00000398712 NWD2Q9ULI1 1742 aa31.27■■■□□ 2.6
SHARPIN-202ENST00000398712 TCIRG1Q13488 830 aa31.26■■■□□ 2.59
SHARPIN-202ENST00000398712 RAD50Q92878 1312 aa31.24■■■□□ 2.59
SHARPIN-202ENST00000398712 HIP1O00291 1037 aa31.24■■■□□ 2.59
SHARPIN-202ENST00000398712 TRIM28Q13263 835 aaKnown RBP31.24■■■□□ 2.59
SHARPIN-202ENST00000398712 KIAA1211Q6ZU35 1233 aa31.24■■■□□ 2.59
SHARPIN-202ENST00000398712 IL25Q9H293 177 aa31.24■■■□□ 2.59
SHARPIN-202ENST00000398712 ZNF330Q9Y3S2 320 aaPredicted RBP31.24■■■□□ 2.59
SHARPIN-202ENST00000398712 MCM2P49736 904 aa31.23■■■□□ 2.59
SHARPIN-202ENST00000398712 TLR7Q9NYK1 1049 aaKnown RBP31.23■■■□□ 2.59
SHARPIN-202ENST00000398712 CHMP3Q9Y3E7 222 aa31.23■■■□□ 2.59
SHARPIN-202ENST00000398712 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.23■■■□□ 2.59
SHARPIN-202ENST00000398712 HSPA4P34932 840 aa31.22■■■□□ 2.59
SHARPIN-202ENST00000398712 DDB1Q16531 1140 aa31.22■■■□□ 2.59
SHARPIN-202ENST00000398712 TNNI3KQ59H18 835 aa31.22■■■□□ 2.59
SHARPIN-202ENST00000398712 CWC27Q6UX04 472 aaKnown RBP31.22■■■□□ 2.59
SHARPIN-202ENST00000398712 SYTL4Q96C24 671 aaPredicted RBP31.22■■■□□ 2.59
SHARPIN-202ENST00000398712 FPGT-TNNI3KV9GXZ4 949 aa31.22■■■□□ 2.59
SHARPIN-202ENST00000398712 TFCP2Q12800 502 aa31.22■■■□□ 2.59
SHARPIN-202ENST00000398712 PALD1Q9ULE6 856 aa31.22■■■□□ 2.59
SHARPIN-202ENST00000398712 KAT6BQ8WYB5 2073 aa31.21■■■□□ 2.59
SHARPIN-202ENST00000398712 NEK4P51957 841 aa31.21■■■□□ 2.59
SHARPIN-202ENST00000398712 ILDR1Q86SU0 546 aaPredicted RBP31.21■■■□□ 2.59
SHARPIN-202ENST00000398712 FOXD4L1Q9NU39 408 aa31.21■■■□□ 2.59
SHARPIN-202ENST00000398712 CYP19A1P11511 503 aaPredicted RBP31.2■■■□□ 2.59
SHARPIN-202ENST00000398712 MCM4P33991 863 aa31.2■■■□□ 2.59
SHARPIN-202ENST00000398712 LSG1Q9H089 658 aaKnown RBP31.2■■■□□ 2.59
SHARPIN-202ENST00000398712 MAP3K15Q6ZN16 1313 aa31.2■■■□□ 2.59
SHARPIN-202ENST00000398712 RAB3GAP1Q15042 981 aa31.2■■■□□ 2.58
SHARPIN-202ENST00000398712 NUTM2BA6NNL0 878 aaPredicted RBP31.19■■■□□ 2.58
SHARPIN-202ENST00000398712 NUTM2EB1AL46 878 aaPredicted RBP31.19■■■□□ 2.58
SHARPIN-202ENST00000398712 PRIM1P49642 420 aaKnown RBP31.19■■■□□ 2.58
SHARPIN-202ENST00000398712 GSE1Q14687 1217 aa31.19■■■□□ 2.58
SHARPIN-202ENST00000398712 NUTM2AQ8IVF1 878 aaPredicted RBP31.19■■■□□ 2.58
SHARPIN-202ENST00000398712 SPATA31A5Q5VU36 1347 aa31.19■■■□□ 2.58
SHARPIN-202ENST00000398712 SPATA31A7Q8IWB4 1347 aa31.19■■■□□ 2.58
SHARPIN-202ENST00000398712 HSPA1LP34931 641 aa31.18■■■□□ 2.58
SHARPIN-202ENST00000398712 SLC4A9Q96Q91 983 aa31.17■■■□□ 2.58
SHARPIN-202ENST00000398712 SLIT2O94813 1529 aa31.17■■■□□ 2.58
SHARPIN-202ENST00000398712 ATP5JP18859 108 aa31.17■■■□□ 2.58
SHARPIN-202ENST00000398712 HSP90AB3PQ58FF7 597 aa31.17■■■□□ 2.58
SHARPIN-202ENST00000398712 GIGYF2Q6Y7W6 1299 aaKnown RBP31.17■■■□□ 2.58
SHARPIN-202ENST00000398712 BOLA2Q9H3K6 86 aa31.17■■■□□ 2.58
SHARPIN-202ENST00000398712 CWC22Q9HCG8 908 aaKnown RBP31.17■■■□□ 2.58
SHARPIN-202ENST00000398712 PCCAP05165 728 aaPredicted RBP31.16■■■□□ 2.58
SHARPIN-202ENST00000398712 DBNLQ9UJU6 430 aaKnown RBP31.16■■■□□ 2.58
SHARPIN-202ENST00000398712 ANKRD36CQ5JPF3 1778 aa31.15■■■□□ 2.58
SHARPIN-202ENST00000398712 BARGINQ6ZT62 677 aa31.15■■■□□ 2.58
SHARPIN-202ENST00000398712 IL15P40933 162 aaPredicted RBP31.15■■■□□ 2.58
SHARPIN-202ENST00000398712 GPR108Q9NPR9 543 aa31.15■■■□□ 2.58
SHARPIN-202ENST00000398712 TNPO1Q92973 898 aaKnown RBP31.14■■■□□ 2.58
SHARPIN-202ENST00000398712 DDX11L8A8MPP1 907 aa31.13■■■□□ 2.57
SHARPIN-202ENST00000398712 ATG9AQ7Z3C6 839 aa31.13■■■□□ 2.57
SHARPIN-202ENST00000398712 GBP4Q96PP9 640 aa31.13■■■□□ 2.57
SHARPIN-202ENST00000398712 ARXQ96QS3 562 aa31.13■■■□□ 2.57
SHARPIN-202ENST00000398712 FSD1Q9BTV5 496 aa31.13■■■□□ 2.57
SHARPIN-202ENST00000398712 PLA2G12BQ9BX93 195 aa31.13■■■□□ 2.57
SHARPIN-202ENST00000398712 CIAO1O76071 339 aa31.12■■■□□ 2.57
SHARPIN-202ENST00000398712 ZBTB38Q8NAP3 1195 aaPredicted RBP31.12■■■□□ 2.57
SHARPIN-202ENST00000398712 CCDC9Q9Y3X0 531 aaKnown RBP31.12■■■□□ 2.57
SHARPIN-202ENST00000398712 EYA2O00167 538 aa31.11■■■□□ 2.57
SHARPIN-202ENST00000398712 IL6STP40189 918 aaPredicted RBP31.11■■■□□ 2.57
SHARPIN-202ENST00000398712 ZBTB1Q9Y2K1 713 aa31.11■■■□□ 2.57
SHARPIN-202ENST00000398712 NUCB2P80303 420 aa31.1■■■□□ 2.57
SHARPIN-202ENST00000398712 SNRKQ9NRH2 765 aa31.1■■■□□ 2.57
SHARPIN-202ENST00000398712 FBXO3Q9UK99 471 aa31.1■■■□□ 2.57
SHARPIN-202ENST00000398712 SNX14Q9Y5W7 946 aa31.1■■■□□ 2.57
SHARPIN-202ENST00000398712 RFX7Q2KHR2 1363 aa31.09■■■□□ 2.57
SHARPIN-202ENST00000398712 CDHR2Q9BYE9 1310 aa31.09■■■□□ 2.57
SHARPIN-202ENST00000398712 NMIQ13287 307 aaPredicted RBP31.09■■■□□ 2.57
SHARPIN-202ENST00000398712 CCDC57Q2TAC2 916 aa31.09■■■□□ 2.57
SHARPIN-202ENST00000398712 MARCH10Q8NA82 808 aaPredicted RBP31.09■■■□□ 2.57
SHARPIN-202ENST00000398712 DBNDD2Q9BQY9 259 aa31.09■■■□□ 2.57
SHARPIN-202ENST00000398712 ERVV-1B6SEH8 477 aa31.08■■■□□ 2.57
SHARPIN-202ENST00000398712 TMX3Q96JJ7 454 aa31.08■■■□□ 2.57
SHARPIN-202ENST00000398712 HLFQ16534 295 aa31.07■■■□□ 2.56
SHARPIN-202ENST00000398712 NUP98P52948 1817 aa31.07■■■□□ 2.56
SHARPIN-202ENST00000398712 CCDC171Q6TFL3 1326 aa31.07■■■□□ 2.56
SHARPIN-202ENST00000398712 NLRP10Q86W26 655 aa31.07■■■□□ 2.56
SHARPIN-202ENST00000398712 CICQ96RK0 1608 aaPredicted RBP31.06■■■□□ 2.56
SHARPIN-202ENST00000398712 FAM89AQ96GI7 184 aa31.06■■■□□ 2.56
SHARPIN-202ENST00000398712 HAUS7Q99871 368 aa31.06■■■□□ 2.56
SHARPIN-202ENST00000398712 PTMSP20962 102 aa31.05■■■□□ 2.56
SHARPIN-202ENST00000398712 PTH1RQ03431 593 aa31.05■■■□□ 2.56
SHARPIN-202ENST00000398712 FAM227BQ96M60 508 aa31.05■■■□□ 2.56
SHARPIN-202ENST00000398712 UPF3BQ9BZI7 483 aaKnown RBP31.05■■■□□ 2.56
SHARPIN-202ENST00000398712 ZNF609O15014 1411 aa31.05■■■□□ 2.56
SHARPIN-202ENST00000398712 CSF1RP07333 972 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms