RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 PRKAR2BP31323 418 aa17.68■□□□□ 0.42
CYLD-202ENST00000398568 CCAR2Q8N163 923 aaKnown RBP17.68■□□□□ 0.42
CYLD-202ENST00000398568 SMARCE1Q969G3 411 aa17.68■□□□□ 0.42
CYLD-202ENST00000398568 CCDC69A6NI79 296 aa17.67■□□□□ 0.42
CYLD-202ENST00000398568 BRD2P25440 801 aaKnown RBP17.67■□□□□ 0.42
CYLD-202ENST00000398568 GYS2P54840 703 aa17.67■□□□□ 0.42
CYLD-202ENST00000398568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.67■□□□□ 0.42
CYLD-202ENST00000398568 ELP1O95163 1332 aa17.67■□□□□ 0.42
CYLD-202ENST00000398568 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
CYLD-202ENST00000398568 A0A1B0GUL7 405 aa17.67■□□□□ 0.42
CYLD-202ENST00000398568 AXDND1Q5T1B0 1012 aaPredicted RBP17.67■□□□□ 0.42
CYLD-202ENST00000398568 DDX19AQ9NUU7 478 aaKnown RBP17.67■□□□□ 0.42
CYLD-202ENST00000398568 DACT1Q9NYF0 836 aa17.67■□□□□ 0.42
CYLD-202ENST00000398568 SSH2Q76I76 1423 aa17.66■□□□□ 0.42
CYLD-202ENST00000398568 LIG1P18858 919 aa17.66■□□□□ 0.42
CYLD-202ENST00000398568 ST5P78524 1137 aa17.66■□□□□ 0.42
CYLD-202ENST00000398568 NCAPGQ9BPX3 1015 aa17.66■□□□□ 0.42
CYLD-202ENST00000398568 LARP6Q9BRS8 491 aaKnown RBP17.66■□□□□ 0.42
CYLD-202ENST00000398568 DNAJC25Q9H1X3 360 aa17.66■□□□□ 0.42
CYLD-202ENST00000398568 TSHZ3Q63HK5 1081 aa17.66■□□□□ 0.42
CYLD-202ENST00000398568 MNS1Q8NEH6 495 aa17.66■□□□□ 0.42
CYLD-202ENST00000398568 TOMM22Q9NS69 142 aa17.66■□□□□ 0.42
CYLD-202ENST00000398568 RRP15Q9Y3B9 282 aaKnown RBP17.66■□□□□ 0.42
CYLD-202ENST00000398568 DIP2AQ14689 1571 aa17.66■□□□□ 0.42
CYLD-202ENST00000398568 GJB2P29033 226 aa17.65■□□□□ 0.42
CYLD-202ENST00000398568 GORABQ5T7V8 394 aa17.65■□□□□ 0.42
CYLD-202ENST00000398568 GOLGA5Q8TBA6 731 aa17.65■□□□□ 0.42
CYLD-202ENST00000398568 MBIPQ9NS73 344 aa17.65■□□□□ 0.42
CYLD-202ENST00000398568 ARID5BQ14865 1188 aa17.65■□□□□ 0.42
CYLD-202ENST00000398568 CAVIN2O95810 425 aa17.65■□□□□ 0.42
CYLD-202ENST00000398568 OAS2P29728 719 aaKnown RBP17.65■□□□□ 0.42
CYLD-202ENST00000398568 TTC31Q49AM3 519 aaPredicted RBP17.65■□□□□ 0.42
CYLD-202ENST00000398568 MTMR6Q9Y217 621 aa17.65■□□□□ 0.42
CYLD-202ENST00000398568 NRDCO43847 1150 aa17.64■□□□□ 0.42
CYLD-202ENST00000398568 CASTP20810 708 aaKnown RBP17.64■□□□□ 0.42
CYLD-202ENST00000398568 SRLQ86TD4 932 aa17.64■□□□□ 0.42
CYLD-202ENST00000398568 FBXO18Q8NFZ0 1043 aa17.64■□□□□ 0.42
CYLD-202ENST00000398568 DEF6Q9H4E7 631 aa17.64■□□□□ 0.42
CYLD-202ENST00000398568 LCMT1Q9UIC8 334 aa17.64■□□□□ 0.42
CYLD-202ENST00000398568 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.64■□□□□ 0.42
CYLD-202ENST00000398568 BECN2A8MW95 431 aa17.64■□□□□ 0.41
CYLD-202ENST00000398568 GUCY2CP25092 1073 aa17.64■□□□□ 0.41
CYLD-202ENST00000398568 AK2P54819 239 aa17.64■□□□□ 0.41
CYLD-202ENST00000398568 LMOD3Q0VAK6 560 aa17.64■□□□□ 0.41
CYLD-202ENST00000398568 GPATCH11Q8N954 259 aa17.64■□□□□ 0.41
CYLD-202ENST00000398568 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
CYLD-202ENST00000398568 ATP8B1O43520 1251 aa17.64■□□□□ 0.41
CYLD-202ENST00000398568 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
CYLD-202ENST00000398568 CCDC83Q8IWF9 413 aa17.64■□□□□ 0.41
CYLD-202ENST00000398568 JRKLQ9Y4A0 524 aa17.64■□□□□ 0.41
CYLD-202ENST00000398568 LMAN1P49257 510 aa17.63■□□□□ 0.41
CYLD-202ENST00000398568 LEKR1Q6ZMV7 388 aa17.63■□□□□ 0.41
CYLD-202ENST00000398568 ERBB3P21860 1342 aa17.63■□□□□ 0.41
CYLD-202ENST00000398568 ARHGEF28Q8N1W1 1705 aaKnown RBP17.63■□□□□ 0.41
CYLD-202ENST00000398568 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
CYLD-202ENST00000398568 MRFAP1L1Q96HT8 127 aa17.63■□□□□ 0.41
CYLD-202ENST00000398568 L2HGDHQ9H9P8 463 aa17.63■□□□□ 0.41
CYLD-202ENST00000398568 TECPR2O15040 1411 aa17.63■□□□□ 0.41
CYLD-202ENST00000398568 TPM1P09493 284 aa17.63■□□□□ 0.41
CYLD-202ENST00000398568 HSPA4P34932 840 aa17.63■□□□□ 0.41
CYLD-202ENST00000398568 TTC6Q86TZ1 520 aa17.63■□□□□ 0.41
CYLD-202ENST00000398568 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
CYLD-202ENST00000398568 USP32Q8NFA0 1604 aa17.62■□□□□ 0.41
CYLD-202ENST00000398568 TOM1O60784 492 aa17.62■□□□□ 0.41
CYLD-202ENST00000398568 PSME1Q06323 249 aa17.62■□□□□ 0.41
CYLD-202ENST00000398568 HOMER1Q86YM7 354 aa17.62■□□□□ 0.41
CYLD-202ENST00000398568 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
CYLD-202ENST00000398568 ADGRL3Q9HAR2 1447 aa17.62■□□□□ 0.41
CYLD-202ENST00000398568 ATP10DQ9P241 1426 aa17.62■□□□□ 0.41
CYLD-202ENST00000398568 NFATC2IPQ8NCF5 419 aa17.62■□□□□ 0.41
CYLD-202ENST00000398568 BICD2Q8TD16 824 aa17.62■□□□□ 0.41
CYLD-202ENST00000398568 ZRANB2O95218 330 aaKnown RBP eCLIP17.61■□□□□ 0.41
CYLD-202ENST00000398568 DRC1Q96MC2 740 aa17.61■□□□□ 0.41
CYLD-202ENST00000398568 CLSTN2Q9H4D0 955 aa17.61■□□□□ 0.41
CYLD-202ENST00000398568 PHF8Q9UPP1 1060 aa17.61■□□□□ 0.41
CYLD-202ENST00000398568 XRN1Q8IZH2 1706 aaKnown RBP17.61■□□□□ 0.41
CYLD-202ENST00000398568 SMC1AQ14683 1233 aaKnown RBP17.61■□□□□ 0.41
CYLD-202ENST00000398568 MEIS3Q99687 375 aa17.61■□□□□ 0.41
CYLD-202ENST00000398568 ZCCHC17Q9NP64 241 aaKnown RBP17.61■□□□□ 0.41
CYLD-202ENST00000398568 EXOC6BQ9Y2D4 811 aa17.61■□□□□ 0.41
CYLD-202ENST00000398568 USP16Q9Y5T5 823 aa17.61■□□□□ 0.41
CYLD-202ENST00000398568 PSEN1P49768 467 aa17.61■□□□□ 0.41
CYLD-202ENST00000398568 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
CYLD-202ENST00000398568 GSDMDP57764 484 aa17.61■□□□□ 0.41
CYLD-202ENST00000398568 SIRT1Q96EB6 747 aa17.61■□□□□ 0.41
CYLD-202ENST00000398568 IL17RAQ96F46 866 aa17.61■□□□□ 0.41
CYLD-202ENST00000398568 LTBP4Q8N2S1 1624 aa17.61■□□□□ 0.41
CYLD-202ENST00000398568 EPB41L2O43491 1005 aaKnown RBP17.6■□□□□ 0.41
CYLD-202ENST00000398568 QRICH2Q9H0J4 1663 aa17.6■□□□□ 0.41
CYLD-202ENST00000398568 TUBB4AP04350 444 aa17.6■□□□□ 0.41
CYLD-202ENST00000398568 IVLP07476 585 aa17.6■□□□□ 0.41
CYLD-202ENST00000398568 SCAND2PQ9GZW5 306 aaPredicted RBP17.6■□□□□ 0.41
CYLD-202ENST00000398568 ACEP12821 1306 aa17.6■□□□□ 0.41
CYLD-202ENST00000398568 CCZ1BP86790 482 aa17.6■□□□□ 0.41
CYLD-202ENST00000398568 CCZ1P86791 482 aaPredicted RBP17.6■□□□□ 0.41
CYLD-202ENST00000398568 LARP1BQ659C4 914 aaKnown RBP17.6■□□□□ 0.41
CYLD-202ENST00000398568 SARM1Q6SZW1 724 aa17.6■□□□□ 0.41
CYLD-202ENST00000398568 BRINP3Q76B58 766 aa17.6■□□□□ 0.41
CYLD-202ENST00000398568 RUFY3Q7L099 469 aa17.6■□□□□ 0.41
CYLD-202ENST00000398568 SPATA32Q96LK8 384 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms