RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 ATP6V1DQ9Y5K8 247 aa16.37■□□□□ 0.21
COL6A2-203ENST00000397763 JAK2O60674 1132 aa16.37■□□□□ 0.21
COL6A2-203ENST00000397763 ZKSCAN1P17029 563 aaPredicted RBP16.37■□□□□ 0.21
COL6A2-203ENST00000397763 NAA30Q147X3 362 aaPredicted RBP16.37■□□□□ 0.21
COL6A2-203ENST00000397763 FSD1Q9BTV5 496 aa16.37■□□□□ 0.21
COL6A2-203ENST00000397763 CCDC186Q7Z3E2 898 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 PDCL2Q8N4E4 241 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 C16orf45Q96MC5 204 aaPredicted RBP16.36■□□□□ 0.21
COL6A2-203ENST00000397763 AOX1Q06278 1338 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 ANO6Q4KMQ2 910 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 ZNF589Q86UQ0 364 aaPredicted RBP16.36■□□□□ 0.21
COL6A2-203ENST00000397763 ZSWIM6Q9HCJ5 1215 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 TTC21AQ8NDW8 1320 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 TECPR2O15040 1411 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 CCDC192P0DO97 292 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 CHAF1AQ13111 956 aaPredicted RBP16.36■□□□□ 0.21
COL6A2-203ENST00000397763 SLFNL1Q499Z3 407 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 RUFY2Q8WXA3 655 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 PRIMPOLQ96LW4 560 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 ADCY9O60503 1353 aa16.36■□□□□ 0.21
COL6A2-203ENST00000397763 VPS53Q5VIR6 699 aa16.35■□□□□ 0.21
COL6A2-203ENST00000397763 ERCC4Q92889 916 aaPredicted RBP16.35■□□□□ 0.21
COL6A2-203ENST00000397763 NUP62CLQ9H1M0 184 aa16.35■□□□□ 0.21
COL6A2-203ENST00000397763 SASH1O94885 1247 aa16.35■□□□□ 0.21
COL6A2-203ENST00000397763 MYL6BP14649 208 aa16.35■□□□□ 0.21
COL6A2-203ENST00000397763 TYRO3Q06418 890 aa16.35■□□□□ 0.21
COL6A2-203ENST00000397763 NECTIN1Q15223 517 aa16.35■□□□□ 0.21
COL6A2-203ENST00000397763 CCDC129Q6ZRS4 1044 aa16.35■□□□□ 0.21
COL6A2-203ENST00000397763 KIAA1524Q8TCG1 905 aa16.35■□□□□ 0.21
COL6A2-203ENST00000397763 SUCLG2Q96I99 432 aa16.35■□□□□ 0.21
COL6A2-203ENST00000397763 RGPD1P0DJD0 1748 aa16.35■□□□□ 0.21
COL6A2-203ENST00000397763 XRN1Q8IZH2 1706 aaKnown RBP16.34■□□□□ 0.21
COL6A2-203ENST00000397763 SLC27A2O14975 620 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 HTATSF1O43719 755 aaKnown RBP16.34■□□□□ 0.21
COL6A2-203ENST00000397763 KCNA6P17658 529 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 BICC1Q9H694 974 aaKnown RBP16.34■□□□□ 0.21
COL6A2-203ENST00000397763 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 EID1Q9Y6B2 187 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 MRVI1Q9Y6F6 885 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 TRIM5Q9C035 493 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 FTOQ9C0B1 505 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL6A2-203ENST00000397763 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
COL6A2-203ENST00000397763 LETM1O95202 739 aaPredicted RBP16.34■□□□□ 0.21
COL6A2-203ENST00000397763 KRT85P78386 507 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 MAP3K11Q16584 847 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 SPATA32Q96LK8 384 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 SEC62Q99442 399 aaKnown RBP16.34■□□□□ 0.21
COL6A2-203ENST00000397763 DNAJC25Q9H1X3 360 aa16.34■□□□□ 0.21
COL6A2-203ENST00000397763 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.21
COL6A2-203ENST00000397763 SLC39A6Q13433 755 aa16.33■□□□□ 0.21
COL6A2-203ENST00000397763 ZNF592Q92610 1267 aa16.33■□□□□ 0.21
COL6A2-203ENST00000397763 NR1I2O75469 434 aa16.33■□□□□ 0.2
COL6A2-203ENST00000397763 CBX8Q9HC52 389 aa16.33■□□□□ 0.2
COL6A2-203ENST00000397763 G3BP1Q13283 466 aaKnown RBP eCLIP16.32■□□□□ 0.2
COL6A2-203ENST00000397763 ARID5BQ14865 1188 aa16.32■□□□□ 0.2
COL6A2-203ENST00000397763 BLOC1S2Q6QNY1 142 aa16.32■□□□□ 0.2
COL6A2-203ENST00000397763 RGPD8O14715 1765 aaPredicted RBP16.32■□□□□ 0.2
COL6A2-203ENST00000397763 IL17RAQ96F46 866 aa16.32■□□□□ 0.2
COL6A2-203ENST00000397763 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
COL6A2-203ENST00000397763 HSP90AB4PQ58FF6 505 aa16.32■□□□□ 0.2
COL6A2-203ENST00000397763 KAZALD1Q96I82 304 aa16.32■□□□□ 0.2
COL6A2-203ENST00000397763 EVI5LQ96CN4 794 aa16.31■□□□□ 0.2
COL6A2-203ENST00000397763 GPATCH3Q96I76 525 aa16.31■□□□□ 0.2
COL6A2-203ENST00000397763 TTC41PQ6P2S7 1318 aa16.3■□□□□ 0.2
COL6A2-203ENST00000397763 FAM208AQ9UK61 1670 aaKnown RBP16.3■□□□□ 0.2
COL6A2-203ENST00000397763 FAM200AQ8TCP9 573 aa16.3■□□□□ 0.2
COL6A2-203ENST00000397763 DNAJC2Q99543 621 aaKnown RBP16.3■□□□□ 0.2
COL6A2-203ENST00000397763 SH2B1Q9NRF2 756 aaPredicted RBP16.3■□□□□ 0.2
COL6A2-203ENST00000397763 SPTLC3Q9NUV7 552 aa16.3■□□□□ 0.2
COL6A2-203ENST00000397763 GUCY1B3Q02153 619 aa16.3■□□□□ 0.2
COL6A2-203ENST00000397763 ZSCAN31Q96LW9 406 aaPredicted RBP16.3■□□□□ 0.2
COL6A2-203ENST00000397763 TOB2Q14106 344 aaPredicted RBP16.3■□□□□ 0.2
COL6A2-203ENST00000397763 MAP4K1Q92918 833 aa16.3■□□□□ 0.2
COL6A2-203ENST00000397763 DBF4Q9UBU7 674 aaPredicted RBP16.3■□□□□ 0.2
COL6A2-203ENST00000397763 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.3■□□□□ 0.2
COL6A2-203ENST00000397763 V9GYY5 206 aaPredicted RBP16.3■□□□□ 0.2
COL6A2-203ENST00000397763 EPHA10Q5JZY3 1008 aa16.29■□□□□ 0.2
COL6A2-203ENST00000397763 PGBD1Q96JS3 809 aa16.29■□□□□ 0.2
COL6A2-203ENST00000397763 FGD1P98174 961 aa16.29■□□□□ 0.2
COL6A2-203ENST00000397763 ZNF771Q7L3S4 317 aaPredicted RBP16.29■□□□□ 0.2
COL6A2-203ENST00000397763 LEO1Q8WVC0 666 aaPredicted RBP16.29■□□□□ 0.2
COL6A2-203ENST00000397763 CHST3Q7LGC8 479 aa16.28■□□□□ 0.2
COL6A2-203ENST00000397763 BRF1Q92994 677 aa16.28■□□□□ 0.2
COL6A2-203ENST00000397763 SYTL4Q96C24 671 aaPredicted RBP16.28■□□□□ 0.2
COL6A2-203ENST00000397763 ZNF165P49910 485 aa16.28■□□□□ 0.2
COL6A2-203ENST00000397763 CCDC144BQ3MJ40 725 aa16.28■□□□□ 0.2
COL6A2-203ENST00000397763 RIC3Q7Z5B4 369 aa16.28■□□□□ 0.2
COL6A2-203ENST00000397763 CCDC144CPQ8IYA2 1237 aa16.28■□□□□ 0.2
COL6A2-203ENST00000397763 A0A0G2JLW4 131 aa16.27■□□□□ 0.2
COL6A2-203ENST00000397763 GRM8O00222 908 aa16.27■□□□□ 0.2
COL6A2-203ENST00000397763 KSR2Q6VAB6 950 aa16.27■□□□□ 0.2
COL6A2-203ENST00000397763 GIGYF1O75420 1035 aaPredicted RBP16.27■□□□□ 0.19
COL6A2-203ENST00000397763 RPS6KB1P23443 525 aa16.27■□□□□ 0.19
COL6A2-203ENST00000397763 ESCO1Q5FWF5 840 aa16.27■□□□□ 0.19
COL6A2-203ENST00000397763 USP16Q9Y5T5 823 aa16.27■□□□□ 0.19
COL6A2-203ENST00000397763 H3BQV1 296 aa16.26■□□□□ 0.19
COL6A2-203ENST00000397763 NPHP1O15259 732 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms