RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 BMP2KLQ5H9B9 411 aa9.91□□□□□ -0.82
PTPRD-204ENST00000397606 SLF2Q8IX21 1173 aa9.91□□□□□ -0.82
PTPRD-204ENST00000397606 CCDC34Q96HJ3 373 aa9.91□□□□□ -0.82
PTPRD-204ENST00000397606 HEG1Q9ULI3 1381 aa9.91□□□□□ -0.82
PTPRD-204ENST00000397606 ITSN1Q15811 1721 aa9.91□□□□□ -0.82
PTPRD-204ENST00000397606 TRIM37O94972 964 aa9.91□□□□□ -0.82
PTPRD-204ENST00000397606 DZIP1Q86YF9 867 aaKnown RBP9.91□□□□□ -0.82
PTPRD-204ENST00000397606 NEK4P51957 841 aa9.9□□□□□ -0.82
PTPRD-204ENST00000397606 TMOD2Q9NZR1 351 aa9.9□□□□□ -0.82
PTPRD-204ENST00000397606 CTDP1Q9Y5B0 961 aaPredicted RBP9.9□□□□□ -0.82
PTPRD-204ENST00000397606 MYO5BQ9ULV0 1848 aa9.9□□□□□ -0.82
PTPRD-204ENST00000397606 DHX16O60231 1041 aaKnown RBP9.9□□□□□ -0.82
PTPRD-204ENST00000397606 TDO2P48775 406 aa9.9□□□□□ -0.82
PTPRD-204ENST00000397606 BRPF1P55201 1214 aaPredicted RBP9.9□□□□□ -0.82
PTPRD-204ENST00000397606 KRT32Q14532 448 aa9.9□□□□□ -0.82
PTPRD-204ENST00000397606 KDRP35968 1356 aa9.9□□□□□ -0.82
PTPRD-204ENST00000397606 ABCC4O15439 1325 aa9.9□□□□□ -0.82
PTPRD-204ENST00000397606 CRKLP46109 303 aaKnown RBP9.9□□□□□ -0.82
PTPRD-204ENST00000397606 ZNF219Q9P2Y4 722 aaPredicted RBP9.9□□□□□ -0.82
PTPRD-204ENST00000397606 NEURL1BA8MQ27 555 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 ANKRD2Q9GZV1 360 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 PA2G4Q9UQ80 394 aaKnown RBP9.89□□□□□ -0.83
PTPRD-204ENST00000397606 SMC3Q9UQE7 1217 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 CYP46A1Q9Y6A2 500 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 RRP12Q5JTH9 1297 aaKnown RBP9.89□□□□□ -0.83
PTPRD-204ENST00000397606 FAM182BQ5T319 152 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 SPTY2D1Q68D10 685 aaPredicted RBP9.89□□□□□ -0.83
PTPRD-204ENST00000397606 SMC5Q8IY18 1101 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 SSH2Q76I76 1423 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 RNF123Q5XPI4 1314 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 MAP3K15Q6ZN16 1313 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 LDHCP07864 332 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 ANKRD1Q15327 319 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 TTLL7Q6ZT98 887 aa9.89□□□□□ -0.83
PTPRD-204ENST00000397606 PALLDQ8WX93 1383 aa9.88□□□□□ -0.83
PTPRD-204ENST00000397606 LRRC7Q96NW7 1537 aa9.88□□□□□ -0.83
PTPRD-204ENST00000397606 GOLIM4O00461 696 aa9.88□□□□□ -0.83
PTPRD-204ENST00000397606 RBM17Q96I25 401 aaKnown RBP9.88□□□□□ -0.83
PTPRD-204ENST00000397606 SPATA31A1Q5TZJ5 1347 aa9.88□□□□□ -0.83
PTPRD-204ENST00000397606 NBPF7P0C2Y1 421 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-204ENST00000397606 HCLS1P14317 486 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-204ENST00000397606 SF3A1Q15459 793 aaKnown RBP9.88□□□□□ -0.83
PTPRD-204ENST00000397606 TTC22Q5TAA0 569 aa9.88□□□□□ -0.83
PTPRD-204ENST00000397606 ZBTB1Q9Y2K1 713 aa9.88□□□□□ -0.83
PTPRD-204ENST00000397606 POLR1AO95602 1720 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-204ENST00000397606 IMMTQ16891 758 aaKnown RBP9.88□□□□□ -0.83
PTPRD-204ENST00000397606 SYAP1Q96A49 352 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-204ENST00000397606 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-204ENST00000397606 CD163L1Q9NR16 1453 aa9.88□□□□□ -0.83
PTPRD-204ENST00000397606 EYA2O00167 538 aa9.88□□□□□ -0.83
PTPRD-204ENST00000397606 PDE1AP54750 535 aa9.88□□□□□ -0.83
PTPRD-204ENST00000397606 U3KPZ7 1027 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-204ENST00000397606 ITGA6P23229 1130 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 BLOC1S2Q6QNY1 142 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 BARGINQ6ZT62 677 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 TTC41PQ6P2S7 1318 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 BEND3Q5T5X7 828 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 MCTP1Q6DN14 999 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 GIGYF2Q6Y7W6 1299 aaKnown RBP9.87□□□□□ -0.83
PTPRD-204ENST00000397606 ZGPATQ8N5A5 531 aaKnown RBP9.87□□□□□ -0.83
PTPRD-204ENST00000397606 SUCLG2Q96I99 432 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 ZNF287Q9HBT7 754 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 SNRKQ9NRH2 765 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 MARCH6O60337 910 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 SLC4A3P48751 1232 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 ZSCAN29Q8IWY8 852 aaPredicted RBP9.87□□□□□ -0.83
PTPRD-204ENST00000397606 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.87□□□□□ -0.83
PTPRD-204ENST00000397606 ADAMTSL3P82987 1691 aa9.87□□□□□ -0.83
PTPRD-204ENST00000397606 ZFYP08048 801 aaPredicted RBP9.87□□□□□ -0.83
PTPRD-204ENST00000397606 NSFL1CQ9UNZ2 370 aaKnown RBP9.87□□□□□ -0.83
PTPRD-204ENST00000397606 ZC3H12CQ9C0D7 883 aaKnown RBP9.86□□□□□ -0.83
PTPRD-204ENST00000397606 USP44Q9H0E7 712 aa9.86□□□□□ -0.83
PTPRD-204ENST00000397606 USP5P45974 858 aa9.86□□□□□ -0.83
PTPRD-204ENST00000397606 SAFBQ15424 915 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTPRD-204ENST00000397606 PROSER3Q2NL68 480 aa9.86□□□□□ -0.83
PTPRD-204ENST00000397606 ZNF804AQ7Z570 1209 aa9.86□□□□□ -0.83
PTPRD-204ENST00000397606 NLGN1Q8N2Q7 840 aa9.86□□□□□ -0.83
PTPRD-204ENST00000397606 ZBTB38Q8NAP3 1195 aaPredicted RBP9.86□□□□□ -0.83
PTPRD-204ENST00000397606 NAPBQ9H115 298 aa9.86□□□□□ -0.83
PTPRD-204ENST00000397606 ATG3Q9NT62 314 aa9.86□□□□□ -0.83
PTPRD-204ENST00000397606 PCCAP05165 728 aaPredicted RBP9.86□□□□□ -0.83
PTPRD-204ENST00000397606 XBP1P17861 261 aa9.86□□□□□ -0.83
PTPRD-204ENST00000397606 NUCB2P80303 420 aa9.86□□□□□ -0.83
PTPRD-204ENST00000397606 SPATA31A5Q5VU36 1347 aa9.86□□□□□ -0.83
PTPRD-204ENST00000397606 SPATA31A7Q8IWB4 1347 aa9.86□□□□□ -0.83
PTPRD-204ENST00000397606 TFCP2Q12800 502 aa9.85□□□□□ -0.83
PTPRD-204ENST00000397606 EYA3Q99504 573 aa9.85□□□□□ -0.83
PTPRD-204ENST00000397606 CHMP5Q9NZZ3 219 aa9.85□□□□□ -0.83
PTPRD-204ENST00000397606 BAG3O95817 575 aa9.85□□□□□ -0.83
PTPRD-204ENST00000397606 FOXD4L5Q5VV16 416 aaPredicted RBP9.85□□□□□ -0.83
PTPRD-204ENST00000397606 RASSF8Q8NHQ8 419 aa9.85□□□□□ -0.83
PTPRD-204ENST00000397606 FOXD4L4Q8WXT5 416 aaPredicted RBP9.85□□□□□ -0.83
PTPRD-204ENST00000397606 PRAMEF22A3QJZ6 481 aa9.85□□□□□ -0.83
PTPRD-204ENST00000397606 ERVV-1B6SEH8 477 aa9.85□□□□□ -0.83
PTPRD-204ENST00000397606 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
PTPRD-204ENST00000397606 GSTO1P78417 241 aa9.85□□□□□ -0.83
PTPRD-204ENST00000397606 USPL1Q5W0Q7 1092 aa9.85□□□□□ -0.83
PTPRD-204ENST00000397606 TSHZ3Q63HK5 1081 aa9.84□□□□□ -0.83
PTPRD-204ENST00000397606 JAKMIP1Q96N16 626 aaKnown RBP9.84□□□□□ -0.83
PTPRD-204ENST00000397606 UBAC1Q9BSL1 405 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms