RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ECHDC1Q9NTX5 307 aa16.65■□□□□ 0.26
NUP98-204ENST00000397004 NRBP1Q9UHY1 535 aa16.65■□□□□ 0.26
NUP98-204ENST00000397004 NMIQ13287 307 aaPredicted RBP16.65■□□□□ 0.26
NUP98-204ENST00000397004 MPRIPQ6WCQ1 1025 aa16.65■□□□□ 0.26
NUP98-204ENST00000397004 KLHDC4Q8TBB5 520 aa16.65■□□□□ 0.26
NUP98-204ENST00000397004 MAP4K1Q92918 833 aa16.65■□□□□ 0.26
NUP98-204ENST00000397004 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
NUP98-204ENST00000397004 PXDNQ92626 1479 aa16.65■□□□□ 0.26
NUP98-204ENST00000397004 LTN1O94822 1766 aa16.65■□□□□ 0.26
NUP98-204ENST00000397004 TOB2Q14106 344 aaPredicted RBP16.65■□□□□ 0.26
NUP98-204ENST00000397004 ZNF589Q86UQ0 364 aaPredicted RBP16.65■□□□□ 0.26
NUP98-204ENST00000397004 TM6SF1Q9BZW5 370 aa16.65■□□□□ 0.26
NUP98-204ENST00000397004 MAP3K2Q9Y2U5 619 aa16.65■□□□□ 0.26
NUP98-204ENST00000397004 LRMPQ12912 555 aa16.64■□□□□ 0.25
NUP98-204ENST00000397004 RBM33Q96EV2 1170 aaKnown RBP16.64■□□□□ 0.25
NUP98-204ENST00000397004 PRIMPOLQ96LW4 560 aa16.64■□□□□ 0.25
NUP98-204ENST00000397004 CCDC94Q9BW85 323 aaPredicted RBP16.64■□□□□ 0.25
NUP98-204ENST00000397004 SLC27A2O14975 620 aa16.64■□□□□ 0.25
NUP98-204ENST00000397004 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
NUP98-204ENST00000397004 TFIP11Q9UBB9 837 aaKnown RBP16.64■□□□□ 0.25
NUP98-204ENST00000397004 LETM1O95202 739 aaPredicted RBP16.64■□□□□ 0.25
NUP98-204ENST00000397004 ZSCAN20P17040 1043 aaPredicted RBP16.64■□□□□ 0.25
NUP98-204ENST00000397004 PTGS1P23219 599 aa16.64■□□□□ 0.25
NUP98-204ENST00000397004 CKAP2LQ8IYA6 745 aa16.64■□□□□ 0.25
NUP98-204ENST00000397004 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
NUP98-204ENST00000397004 SUCLG2Q96I99 432 aa16.63■□□□□ 0.25
NUP98-204ENST00000397004 USP54Q70EL1 1684 aa16.63■□□□□ 0.25
NUP98-204ENST00000397004 RIOK3O14730 519 aaKnown RBP16.63■□□□□ 0.25
NUP98-204ENST00000397004 KCNA6P17658 529 aa16.63■□□□□ 0.25
NUP98-204ENST00000397004 AACSQ86V21 672 aa16.63■□□□□ 0.25
NUP98-204ENST00000397004 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
NUP98-204ENST00000397004 CLASRPQ8N2M8 674 aaKnown RBP16.62■□□□□ 0.25
NUP98-204ENST00000397004 PGBD1Q96JS3 809 aa16.62■□□□□ 0.25
NUP98-204ENST00000397004 NDUFB9Q9Y6M9 179 aa16.62■□□□□ 0.25
NUP98-204ENST00000397004 OS9Q13438 667 aaPredicted RBP16.62■□□□□ 0.25
NUP98-204ENST00000397004 LARP1BQ659C4 914 aaKnown RBP16.62■□□□□ 0.25
NUP98-204ENST00000397004 SNRKQ9NRH2 765 aa16.61■□□□□ 0.25
NUP98-204ENST00000397004 TYRO3Q06418 890 aa16.61■□□□□ 0.25
NUP98-204ENST00000397004 BICC1Q9H694 974 aaKnown RBP16.61■□□□□ 0.25
NUP98-204ENST00000397004 DACT1Q9NYF0 836 aa16.61■□□□□ 0.25
NUP98-204ENST00000397004 NFAT5O94916 1531 aa16.61■□□□□ 0.25
NUP98-204ENST00000397004 BTBD11A6QL63 1104 aa16.6■□□□□ 0.25
NUP98-204ENST00000397004 SH2B1Q9NRF2 756 aaPredicted RBP16.6■□□□□ 0.25
NUP98-204ENST00000397004 HEG1Q9ULI3 1381 aa16.6■□□□□ 0.25
NUP98-204ENST00000397004 JAK2O60674 1132 aa16.6■□□□□ 0.25
NUP98-204ENST00000397004 GIGYF1O75420 1035 aaPredicted RBP16.6■□□□□ 0.25
NUP98-204ENST00000397004 BOLA2Q9H3K6 86 aa16.6■□□□□ 0.25
NUP98-204ENST00000397004 CBX8Q9HC52 389 aa16.6■□□□□ 0.25
NUP98-204ENST00000397004 NR1I2O75469 434 aa16.6■□□□□ 0.25
NUP98-204ENST00000397004 EPHA10Q5JZY3 1008 aa16.6■□□□□ 0.25
NUP98-204ENST00000397004 EVI5LQ96CN4 794 aa16.6■□□□□ 0.25
NUP98-204ENST00000397004 STK3Q13188 491 aa16.59■□□□□ 0.25
NUP98-204ENST00000397004 PDIA6Q15084 440 aa16.59■□□□□ 0.25
NUP98-204ENST00000397004 SMAP1Q8IYB5 467 aaPredicted RBP16.59■□□□□ 0.25
NUP98-204ENST00000397004 MED23Q9ULK4 1368 aa16.59■□□□□ 0.25
NUP98-204ENST00000397004 CBX1P83916 185 aa16.59■□□□□ 0.25
NUP98-204ENST00000397004 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
NUP98-204ENST00000397004 ATP6V1DQ9Y5K8 247 aa16.59■□□□□ 0.25
NUP98-204ENST00000397004 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
NUP98-204ENST00000397004 NAA30Q147X3 362 aaPredicted RBP16.59■□□□□ 0.25
NUP98-204ENST00000397004 IP6K1Q92551 441 aa16.59■□□□□ 0.25
NUP98-204ENST00000397004 ZSCAN31Q96LW9 406 aaPredicted RBP16.59■□□□□ 0.25
NUP98-204ENST00000397004 SIL1Q9H173 461 aa16.59■□□□□ 0.25
NUP98-204ENST00000397004 KIF3AQ9Y496 699 aa16.59■□□□□ 0.25
NUP98-204ENST00000397004 ANO6Q4KMQ2 910 aa16.58■□□□□ 0.25
NUP98-204ENST00000397004 FAM200AQ8TCP9 573 aa16.58■□□□□ 0.25
NUP98-204ENST00000397004 LMO7Q8WWI1 1683 aa16.58■□□□□ 0.25
NUP98-204ENST00000397004 A0A087WWV3 80 aa16.58■□□□□ 0.24
NUP98-204ENST00000397004 HOXB7P09629 217 aa16.58■□□□□ 0.24
NUP98-204ENST00000397004 IFIT2P09913 472 aaKnown RBP16.58■□□□□ 0.24
NUP98-204ENST00000397004 PPP4R3BQ5MIZ7 849 aa16.58■□□□□ 0.24
NUP98-204ENST00000397004 RBM43Q6ZSC3 357 aaKnown RBP16.58■□□□□ 0.24
NUP98-204ENST00000397004 MTERF4Q7Z6M4 381 aaKnown RBP16.58■□□□□ 0.24
NUP98-204ENST00000397004 CCDC144BQ3MJ40 725 aa16.58■□□□□ 0.24
NUP98-204ENST00000397004 CCDC144CPQ8IYA2 1237 aa16.58■□□□□ 0.24
NUP98-204ENST00000397004 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.24
NUP98-204ENST00000397004 CCDC192P0DO97 292 aa16.57■□□□□ 0.24
NUP98-204ENST00000397004 LEO1Q8WVC0 666 aaPredicted RBP16.57■□□□□ 0.24
NUP98-204ENST00000397004 JCADQ9P266 1359 aa16.57■□□□□ 0.24
NUP98-204ENST00000397004 HSP90AB4PQ58FF6 505 aa16.57■□□□□ 0.24
NUP98-204ENST00000397004 KSR2Q6VAB6 950 aa16.57■□□□□ 0.24
NUP98-204ENST00000397004 CCDC186Q7Z3E2 898 aa16.57■□□□□ 0.24
NUP98-204ENST00000397004 USP16Q9Y5T5 823 aa16.57■□□□□ 0.24
NUP98-204ENST00000397004 ELP1O95163 1332 aa16.57■□□□□ 0.24
NUP98-204ENST00000397004 CTIFO43310 598 aaKnown RBP16.57■□□□□ 0.24
NUP98-204ENST00000397004 RPS6KB1P23443 525 aa16.57■□□□□ 0.24
NUP98-204ENST00000397004 C14orf37Q86TY3 774 aa16.57■□□□□ 0.24
NUP98-204ENST00000397004 ANKRD7Q92527 254 aa16.57■□□□□ 0.24
NUP98-204ENST00000397004 DBF4Q9UBU7 674 aaPredicted RBP16.57■□□□□ 0.24
NUP98-204ENST00000397004 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
NUP98-204ENST00000397004 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
NUP98-204ENST00000397004 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
NUP98-204ENST00000397004 FTOQ9C0B1 505 aaKnown RBP eCLIP16.56■□□□□ 0.24
NUP98-204ENST00000397004 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
NUP98-204ENST00000397004 ARID5BQ14865 1188 aa16.56■□□□□ 0.24
NUP98-204ENST00000397004 MAP3K11Q16584 847 aa16.56■□□□□ 0.24
NUP98-204ENST00000397004 SLFNL1Q499Z3 407 aa16.56■□□□□ 0.24
NUP98-204ENST00000397004 PLA2G4DQ86XP0 818 aa16.56■□□□□ 0.24
NUP98-204ENST00000397004 NUP62CLQ9H1M0 184 aa16.56■□□□□ 0.24
NUP98-204ENST00000397004 ZHX1Q9UKY1 873 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms