RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 THRAP3Q9Y2W1 955 aaKnown RBP19.48■□□□□ 0.71
SNX6-202ENST00000396526 FPGT-TNNI3KV9GXZ4 949 aa19.48■□□□□ 0.71
SNX6-202ENST00000396526 ADAMTS2O95450 1211 aa19.48■□□□□ 0.71
SNX6-202ENST00000396526 RFX5P48382 616 aaPredicted RBP19.48■□□□□ 0.71
SNX6-202ENST00000396526 CASP7P55210 303 aa19.48■□□□□ 0.71
SNX6-202ENST00000396526 COL14A1Q05707 1796 aaKnown RBP19.48■□□□□ 0.71
SNX6-202ENST00000396526 TOM1O60784 492 aa19.47■□□□□ 0.71
SNX6-202ENST00000396526 IL15P40933 162 aaPredicted RBP19.47■□□□□ 0.71
SNX6-202ENST00000396526 KCPQ6ZWJ8 1503 aa19.47■□□□□ 0.71
SNX6-202ENST00000396526 TFCP2Q12800 502 aa19.47■□□□□ 0.71
SNX6-202ENST00000396526 TRIM28Q13263 835 aaKnown RBP19.47■□□□□ 0.71
SNX6-202ENST00000396526 TRAK2O60296 914 aa19.47■□□□□ 0.71
SNX6-202ENST00000396526 IL17RAQ96F46 866 aa19.47■□□□□ 0.71
SNX6-202ENST00000396526 ATP5JP18859 108 aa19.46■□□□□ 0.71
SNX6-202ENST00000396526 CCDC57Q2TAC2 916 aa19.46■□□□□ 0.71
SNX6-202ENST00000396526 PALD1Q9ULE6 856 aa19.46■□□□□ 0.71
SNX6-202ENST00000396526 TMX3Q96JJ7 454 aa19.46■□□□□ 0.71
SNX6-202ENST00000396526 LSG1Q9H089 658 aaKnown RBP19.46■□□□□ 0.71
SNX6-202ENST00000396526 A0A0G2JS52 829 aa19.46■□□□□ 0.71
SNX6-202ENST00000396526 DDB1Q16531 1140 aa19.46■□□□□ 0.71
SNX6-202ENST00000396526 TAF7LQ5H9L4 462 aa19.46■□□□□ 0.71
SNX6-202ENST00000396526 RNF20Q5VTR2 975 aa19.46■□□□□ 0.71
SNX6-202ENST00000396526 ISCA1Q9BUE6 129 aa19.46■□□□□ 0.71
SNX6-202ENST00000396526 CCDC9Q9Y3X0 531 aaKnown RBP19.45■□□□□ 0.7
SNX6-202ENST00000396526 FOXO4P98177 505 aa19.45■□□□□ 0.7
SNX6-202ENST00000396526 AHDC1Q5TGY3 1603 aaPredicted RBP19.45■□□□□ 0.7
SNX6-202ENST00000396526 GPR108Q9NPR9 543 aa19.44■□□□□ 0.7
SNX6-202ENST00000396526 KAT6BQ8WYB5 2073 aa19.44■□□□□ 0.7
SNX6-202ENST00000396526 INTS4Q96HW7 963 aaKnown RBP19.44■□□□□ 0.7
SNX6-202ENST00000396526 NEUROD6Q96NK8 337 aa19.44■□□□□ 0.7
SNX6-202ENST00000396526 UPF3BQ9BZI7 483 aaKnown RBP19.44■□□□□ 0.7
SNX6-202ENST00000396526 CEP126Q9P2H0 1117 aa19.43■□□□□ 0.7
SNX6-202ENST00000396526 FBXO3Q9UK99 471 aa19.43■□□□□ 0.7
SNX6-202ENST00000396526 ROBO1Q9Y6N7 1651 aa19.43■□□□□ 0.7
SNX6-202ENST00000396526 EYA2O00167 538 aa19.43■□□□□ 0.7
SNX6-202ENST00000396526 TLR7Q9NYK1 1049 aaKnown RBP19.43■□□□□ 0.7
SNX6-202ENST00000396526 DISP2A7MBM2 1401 aa19.43■□□□□ 0.7
SNX6-202ENST00000396526 MAP3K15Q6ZN16 1313 aa19.43■□□□□ 0.7
SNX6-202ENST00000396526 PCCAP05165 728 aaPredicted RBP19.43■□□□□ 0.7
SNX6-202ENST00000396526 AK9Q5TCS8 1911 aa19.42■□□□□ 0.7
SNX6-202ENST00000396526 L1TD1Q5T7N2 865 aaKnown RBP19.42■□□□□ 0.7
SNX6-202ENST00000396526 GIGYF2Q6Y7W6 1299 aaKnown RBP19.42■□□□□ 0.7
SNX6-202ENST00000396526 ARFGEF2Q9Y6D5 1785 aa19.42■□□□□ 0.7
SNX6-202ENST00000396526 NUTM2BA6NNL0 878 aaPredicted RBP19.42■□□□□ 0.7
SNX6-202ENST00000396526 NUTM2EB1AL46 878 aaPredicted RBP19.42■□□□□ 0.7
SNX6-202ENST00000396526 SSFA2P28290 1259 aa19.42■□□□□ 0.7
SNX6-202ENST00000396526 PRIM1P49642 420 aaKnown RBP19.42■□□□□ 0.7
SNX6-202ENST00000396526 NUTM2AQ8IVF1 878 aaPredicted RBP19.42■□□□□ 0.7
SNX6-202ENST00000396526 DBNLQ9UJU6 430 aaKnown RBP19.42■□□□□ 0.7
SNX6-202ENST00000396526 SNX14Q9Y5W7 946 aa19.42■□□□□ 0.7
SNX6-202ENST00000396526 UBR2Q8IWV8 1755 aa19.42■□□□□ 0.7
SNX6-202ENST00000396526 CIAO1O76071 339 aa19.41■□□□□ 0.7
SNX6-202ENST00000396526 PSMA5P28066 241 aa19.41■□□□□ 0.7
SNX6-202ENST00000396526 CCDC171Q6TFL3 1326 aa19.41■□□□□ 0.7
SNX6-202ENST00000396526 BCL9O00512 1426 aa19.41■□□□□ 0.7
SNX6-202ENST00000396526 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
SNX6-202ENST00000396526 AKAP2Q9Y2D5 859 aa19.41■□□□□ 0.7
SNX6-202ENST00000396526 NMIQ13287 307 aaPredicted RBP19.41■□□□□ 0.7
SNX6-202ENST00000396526 NOL8Q76FK4 1167 aaKnown RBP19.41■□□□□ 0.7
SNX6-202ENST00000396526 ZBTB38Q8NAP3 1195 aaPredicted RBP19.41■□□□□ 0.7
SNX6-202ENST00000396526 IL25Q9H293 177 aa19.41■□□□□ 0.7
SNX6-202ENST00000396526 TUBGCP6Q96RT7 1819 aa19.4■□□□□ 0.7
SNX6-202ENST00000396526 LRRFIP1Q32MZ4 808 aaKnown RBP19.4■□□□□ 0.7
SNX6-202ENST00000396526 GORABQ5T7V8 394 aa19.4■□□□□ 0.7
SNX6-202ENST00000396526 TICAM2Q86XR7 235 aa19.4■□□□□ 0.7
SNX6-202ENST00000396526 DNAJC2Q99543 621 aaKnown RBP19.4■□□□□ 0.7
SNX6-202ENST00000396526 DBNDD2Q9BQY9 259 aa19.4■□□□□ 0.7
SNX6-202ENST00000396526 CYP46A1Q9Y6A2 500 aa19.4■□□□□ 0.7
SNX6-202ENST00000396526 IFIT5Q13325 482 aaKnown RBP19.4■□□□□ 0.7
SNX6-202ENST00000396526 CUL4AQ13619 759 aa19.4■□□□□ 0.7
SNX6-202ENST00000396526 PRPF40BQ6NWY9 871 aaKnown RBP19.4■□□□□ 0.7
SNX6-202ENST00000396526 CLEC17AQ6ZS10 378 aa19.4■□□□□ 0.7
SNX6-202ENST00000396526 CYP19A1P11511 503 aaPredicted RBP19.39■□□□□ 0.69
SNX6-202ENST00000396526 TM6SF1Q9BZW5 370 aa19.39■□□□□ 0.69
SNX6-202ENST00000396526 SPATA31A1Q5TZJ5 1347 aa19.39■□□□□ 0.69
SNX6-202ENST00000396526 IL6STP40189 918 aaPredicted RBP19.39■□□□□ 0.69
SNX6-202ENST00000396526 PIP4K2BP78356 416 aa19.39■□□□□ 0.69
SNX6-202ENST00000396526 GLI3P10071 1580 aa19.39■□□□□ 0.69
SNX6-202ENST00000396526 PAPPAQ13219 1627 aa19.38■□□□□ 0.69
SNX6-202ENST00000396526 ZGPATQ8N5A5 531 aaKnown RBP19.38■□□□□ 0.69
SNX6-202ENST00000396526 HAUS7Q99871 368 aa19.38■□□□□ 0.69
SNX6-202ENST00000396526 LIMCH1Q9UPQ0 1083 aa19.38■□□□□ 0.69
SNX6-202ENST00000396526 BAG4O95429 457 aaKnown RBP19.38■□□□□ 0.69
SNX6-202ENST00000396526 CASTP20810 708 aaKnown RBP19.38■□□□□ 0.69
SNX6-202ENST00000396526 FAM227BQ96M60 508 aa19.38■□□□□ 0.69
SNX6-202ENST00000396526 PLA2G12BQ9BX93 195 aa19.38■□□□□ 0.69
SNX6-202ENST00000396526 RBM8AQ9Y5S9 174 aaKnown RBP19.38■□□□□ 0.69
SNX6-202ENST00000396526 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.38■□□□□ 0.69
SNX6-202ENST00000396526 ERVV-1B6SEH8 477 aa19.37■□□□□ 0.69
SNX6-202ENST00000396526 JAKMIP1Q96N16 626 aaKnown RBP19.37■□□□□ 0.69
SNX6-202ENST00000396526 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.37■□□□□ 0.69
SNX6-202ENST00000396526 RFX7Q2KHR2 1363 aa19.37■□□□□ 0.69
SNX6-202ENST00000396526 CCDC158Q5M9N0 1113 aa19.37■□□□□ 0.69
SNX6-202ENST00000396526 MAP4K1Q92918 833 aa19.37■□□□□ 0.69
SNX6-202ENST00000396526 FAM89AQ96GI7 184 aa19.37■□□□□ 0.69
SNX6-202ENST00000396526 ZSCAN31Q96LW9 406 aaPredicted RBP19.37■□□□□ 0.69
SNX6-202ENST00000396526 GZF1Q9H116 711 aaPredicted RBP19.37■□□□□ 0.69
SNX6-202ENST00000396526 HMG20BQ9P0W2 317 aa19.37■□□□□ 0.69
SNX6-202ENST00000396526 COL22A1Q8NFW1 1626 aaPredicted RBP19.36■□□□□ 0.69
SNX6-202ENST00000396526 SHANK3Q9BYB0 1731 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms