RNA–Protein interactions for RNA: ENST00000395047.6

VDAC1-203, Transcript of voltage dependent anion channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDAC1, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-203ENST00000395047 LINS1Q8NG48 757 aa27.25■■□□□ 1.95
VDAC1-203ENST00000395047 CWC25Q9NXE8 425 aaPredicted RBP27.25■■□□□ 1.95
VDAC1-203ENST00000395047 TRMT112Q9UI30 125 aaKnown RBP27.25■■□□□ 1.95
VDAC1-203ENST00000395047 PPP1R42Q7Z4L9 355 aa27.25■■□□□ 1.95
VDAC1-203ENST00000395047 SYNE4Q8N205 404 aa27.25■■□□□ 1.95
VDAC1-203ENST00000395047 CNBD1Q8NA66 436 aa27.25■■□□□ 1.95
VDAC1-203ENST00000395047 SRCIN1Q9C0H9 1055 aa27.25■■□□□ 1.95
VDAC1-203ENST00000395047 FAM89AQ96GI7 184 aa27.24■■□□□ 1.95
VDAC1-203ENST00000395047 UTP14AQ9BVJ6 771 aaKnown RBP27.24■■□□□ 1.95
VDAC1-203ENST00000395047 PRR5LQ6MZQ0 368 aa27.23■■□□□ 1.95
VDAC1-203ENST00000395047 TPTE2Q6XPS3 522 aa27.23■■□□□ 1.95
VDAC1-203ENST00000395047 CCDC191Q8NCU4 936 aa27.23■■□□□ 1.95
VDAC1-203ENST00000395047 NTSR2O95665 410 aa27.23■■□□□ 1.95
VDAC1-203ENST00000395047 PANK1Q8TE04 598 aa27.23■■□□□ 1.95
VDAC1-203ENST00000395047 NRXN2Q9P2S2 1712 aa27.22■■□□□ 1.95
VDAC1-203ENST00000395047 ABCC4O15439 1325 aa27.22■■□□□ 1.95
VDAC1-203ENST00000395047 RLBP1P12271 317 aa27.22■■□□□ 1.95
VDAC1-203ENST00000395047 ERFEQ4G0M1 354 aa27.22■■□□□ 1.95
VDAC1-203ENST00000395047 DZIP1LQ8IYY4 767 aaKnown RBP27.22■■□□□ 1.95
VDAC1-203ENST00000395047 SUPT16HQ9Y5B9 1047 aaKnown RBP27.22■■□□□ 1.95
VDAC1-203ENST00000395047 TRIM28Q13263 835 aaKnown RBP27.21■■□□□ 1.95
VDAC1-203ENST00000395047 GCKRQ14397 625 aa27.21■■□□□ 1.95
VDAC1-203ENST00000395047 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.21■■□□□ 1.95
VDAC1-203ENST00000395047 NYXQ9GZU5 481 aa27.21■■□□□ 1.95
VDAC1-203ENST00000395047 TMEM57Q8N5G2 664 aa27.21■■□□□ 1.95
VDAC1-203ENST00000395047 PXDNLA1KZ92 1463 aa27.2■■□□□ 1.95
VDAC1-203ENST00000395047 N4BP2Q86UW6 1770 aaPredicted RBP27.2■■□□□ 1.95
VDAC1-203ENST00000395047 C20orf194Q5TEA3 1177 aa27.2■■□□□ 1.94
VDAC1-203ENST00000395047 RRP1P56182 461 aaKnown RBP27.19■■□□□ 1.94
VDAC1-203ENST00000395047 CCT4P50991 539 aaKnown RBP27.19■■□□□ 1.94
VDAC1-203ENST00000395047 ST5P78524 1137 aa27.19■■□□□ 1.94
VDAC1-203ENST00000395047 UBE3BQ7Z3V4 1068 aa27.19■■□□□ 1.94
VDAC1-203ENST00000395047 ABCC12Q96J65 1359 aa27.18■■□□□ 1.94
VDAC1-203ENST00000395047 SH3TC1Q8TE82 1336 aa27.18■■□□□ 1.94
VDAC1-203ENST00000395047 ANKRD31Q8N7Z5 1873 aa27.18■■□□□ 1.94
VDAC1-203ENST00000395047 C9orf78Q9NZ63 289 aaPredicted RBP27.18■■□□□ 1.94
VDAC1-203ENST00000395047 ALDH1L1O75891 902 aa27.17■■□□□ 1.94
VDAC1-203ENST00000395047 HCLS1P14317 486 aaPredicted RBP27.17■■□□□ 1.94
VDAC1-203ENST00000395047 ITPRIPQ8IWB1 547 aa27.17■■□□□ 1.94
VDAC1-203ENST00000395047 ZBTB38Q8NAP3 1195 aaPredicted RBP27.17■■□□□ 1.94
VDAC1-203ENST00000395047 CENPBP07199 599 aaPredicted RBP27.16■■□□□ 1.94
VDAC1-203ENST00000395047 INTS3Q68E01 1043 aaKnown RBP27.15■■□□□ 1.94
VDAC1-203ENST00000395047 DDX60Q8IY21 1712 aaKnown RBP27.15■■□□□ 1.94
VDAC1-203ENST00000395047 PCCAP05165 728 aaPredicted RBP27.15■■□□□ 1.94
VDAC1-203ENST00000395047 TNRC6CQ9HCJ0 1690 aaKnown RBP27.14■■□□□ 1.94
VDAC1-203ENST00000395047 GRM8O00222 908 aa27.14■■□□□ 1.94
VDAC1-203ENST00000395047 IRS4O14654 1257 aaPredicted RBP27.14■■□□□ 1.94
VDAC1-203ENST00000395047 NBPF7P0C2Y1 421 aaPredicted RBP27.14■■□□□ 1.94
VDAC1-203ENST00000395047 COG6Q9Y2V7 657 aa27.14■■□□□ 1.94
VDAC1-203ENST00000395047 IBTKQ9P2D0 1353 aaPredicted RBP27.14■■□□□ 1.94
VDAC1-203ENST00000395047 GOLGB1Q14789 3259 aaKnown RBP27.13■■□□□ 1.93
VDAC1-203ENST00000395047 FHDC1Q9C0D6 1143 aaPredicted RBP27.13■■□□□ 1.93
VDAC1-203ENST00000395047 LRP5O75197 1615 aa27.13■■□□□ 1.93
VDAC1-203ENST00000395047 H7C1W4 665 aa27.13■■□□□ 1.93
VDAC1-203ENST00000395047 USP44Q9H0E7 712 aa27.13■■□□□ 1.93
VDAC1-203ENST00000395047 C10orf71Q711Q0 1435 aa27.12■■□□□ 1.93
VDAC1-203ENST00000395047 KIF13BQ9NQT8 1826 aa27.12■■□□□ 1.93
VDAC1-203ENST00000395047 LAMB2P55268 1798 aa27.11■■□□□ 1.93
VDAC1-203ENST00000395047 MS4A1P11836 297 aa27.11■■□□□ 1.93
VDAC1-203ENST00000395047 C3orf67Q6ZVT6 689 aa27.11■■□□□ 1.93
VDAC1-203ENST00000395047 WWC3Q9ULE0 1092 aa27.11■■□□□ 1.93
VDAC1-203ENST00000395047 MEIS3Q99687 375 aa27.1■■□□□ 1.93
VDAC1-203ENST00000395047 MYH3P11055 1940 aa27.1■■□□□ 1.93
VDAC1-203ENST00000395047 CCDC85AQ96PX6 553 aaPredicted RBP27.1■■□□□ 1.93
VDAC1-203ENST00000395047 BRIP1Q9BX63 1249 aa27.1■■□□□ 1.93
VDAC1-203ENST00000395047 RNF123Q5XPI4 1314 aa27.1■■□□□ 1.93
VDAC1-203ENST00000395047 CHRNA5P30532 468 aa27.09■■□□□ 1.93
VDAC1-203ENST00000395047 CASP7P55210 303 aa27.08■■□□□ 1.93
VDAC1-203ENST00000395047 NLGN2Q8NFZ4 835 aa27.08■■□□□ 1.93
VDAC1-203ENST00000395047 A0A0G2JLW4 131 aa27.08■■□□□ 1.93
VDAC1-203ENST00000395047 PDE3AQ14432 1141 aa27.08■■□□□ 1.93
VDAC1-203ENST00000395047 NLRP3Q96P20 1036 aa27.08■■□□□ 1.93
VDAC1-203ENST00000395047 COL11A2P13942 1736 aaPredicted RBP27.08■■□□□ 1.92
VDAC1-203ENST00000395047 PDE6BP35913 854 aa27.07■■□□□ 1.92
VDAC1-203ENST00000395047 MVPQ14764 893 aaKnown RBP27.07■■□□□ 1.92
VDAC1-203ENST00000395047 SLC10A5Q5PT55 438 aa27.07■■□□□ 1.92
VDAC1-203ENST00000395047 TAF1P21675 1872 aa27.07■■□□□ 1.92
VDAC1-203ENST00000395047 CACNA1SQ13698 1873 aa27.07■■□□□ 1.92
VDAC1-203ENST00000395047 IRX6P78412 446 aaPredicted RBP27.06■■□□□ 1.92
VDAC1-203ENST00000395047 C2CD5Q86YS7 1000 aa27.06■■□□□ 1.92
VDAC1-203ENST00000395047 SUCLG2Q96I99 432 aa27.06■■□□□ 1.92
VDAC1-203ENST00000395047 CD2APQ9Y5K6 639 aa27.06■■□□□ 1.92
VDAC1-203ENST00000395047 CDHR2Q9BYE9 1310 aa27.06■■□□□ 1.92
VDAC1-203ENST00000395047 UBTFL1P0CB47 393 aaPredicted RBP27.06■■□□□ 1.92
VDAC1-203ENST00000395047 PDE8AO60658 829 aa27.05■■□□□ 1.92
VDAC1-203ENST00000395047 SYT17Q9BSW7 474 aa27.05■■□□□ 1.92
VDAC1-203ENST00000395047 DPEP1P16444 411 aa27.04■■□□□ 1.92
VDAC1-203ENST00000395047 UTYO14607 1347 aa27.04■■□□□ 1.92
VDAC1-203ENST00000395047 EPHA10Q5JZY3 1008 aa27.04■■□□□ 1.92
VDAC1-203ENST00000395047 ZNF622Q969S3 477 aaKnown RBP eCLIP27.04■■□□□ 1.92
VDAC1-203ENST00000395047 KIAA1551Q9HCM1 1747 aa27.04■■□□□ 1.92
VDAC1-203ENST00000395047 H0YIN7 160 aa27.03■■□□□ 1.92
VDAC1-203ENST00000395047 C1orf115Q9H7X2 142 aa27.03■■□□□ 1.92
VDAC1-203ENST00000395047 CHMP3Q9Y3E7 222 aa27.03■■□□□ 1.92
VDAC1-203ENST00000395047 ZBTB7BO15156 539 aaPredicted RBP27.02■■□□□ 1.92
VDAC1-203ENST00000395047 CTSWP56202 376 aa27.02■■□□□ 1.92
VDAC1-203ENST00000395047 RPGRQ92834 1020 aaKnown RBP27.02■■□□□ 1.92
VDAC1-203ENST00000395047 KAZALD1Q96I82 304 aa27.02■■□□□ 1.92
VDAC1-203ENST00000395047 LRRFIP2Q9Y608 721 aaKnown RBP27.02■■□□□ 1.92
VDAC1-203ENST00000395047 GNAI3P08754 354 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms