RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 UBN2Q6ZU65 1347 aa8.24□□□□□ -1.09
SMARCAD1-203ENST00000394961 RBBP6Q7Z6E9 1792 aaKnown RBP8.24□□□□□ -1.09
SMARCAD1-203ENST00000394961 C21orf2O43822 256 aa8.24□□□□□ -1.09
SMARCAD1-203ENST00000394961 TRIM28Q13263 835 aaKnown RBP8.24□□□□□ -1.09
SMARCAD1-203ENST00000394961 MYBBP1AQ9BQG0 1328 aaKnown RBP8.24□□□□□ -1.09
SMARCAD1-203ENST00000394961 KIF6Q6ZMV9 814 aa8.24□□□□□ -1.09
SMARCAD1-203ENST00000394961 USP50Q70EL3 339 aaPredicted RBP8.24□□□□□ -1.09
SMARCAD1-203ENST00000394961 MCM10Q7L590 875 aa8.24□□□□□ -1.09
SMARCAD1-203ENST00000394961 PPP1R42Q7Z4L9 355 aa8.24□□□□□ -1.09
SMARCAD1-203ENST00000394961 RBM17Q96I25 401 aaKnown RBP8.24□□□□□ -1.09
SMARCAD1-203ENST00000394961 NEFMP07197 916 aa8.23□□□□□ -1.09
SMARCAD1-203ENST00000394961 NIP7Q9Y221 180 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMARCAD1-203ENST00000394961 CHL1O00533 1208 aa8.23□□□□□ -1.09
SMARCAD1-203ENST00000394961 MMP14P50281 582 aa8.23□□□□□ -1.09
SMARCAD1-203ENST00000394961 NPM2Q86SE8 214 aaKnown RBP8.23□□□□□ -1.09
SMARCAD1-203ENST00000394961 HACL1Q9UJ83 578 aa8.23□□□□□ -1.09
SMARCAD1-203ENST00000394961 PAPPA2Q9BXP8 1791 aa8.23□□□□□ -1.09
SMARCAD1-203ENST00000394961 ZNF622Q969S3 477 aaKnown RBP eCLIP8.23□□□□□ -1.093e-6■■■□□ 15.6
SMARCAD1-203ENST00000394961 ATP6V0A2Q9Y487 856 aa8.23□□□□□ -1.09
SMARCAD1-203ENST00000394961 RTL9Q8NET4 1388 aa8.23□□□□□ -1.09
SMARCAD1-203ENST00000394961 HLFQ16534 295 aa8.22□□□□□ -1.09
SMARCAD1-203ENST00000394961 SP8Q8IXZ3 490 aa8.22□□□□□ -1.09
SMARCAD1-203ENST00000394961 SPEF2Q9C093 1822 aa8.22□□□□□ -1.09
SMARCAD1-203ENST00000394961 ZNF541Q9H0D2 1346 aa8.22□□□□□ -1.09
SMARCAD1-203ENST00000394961 BBOX1O75936 387 aa8.22□□□□□ -1.09
SMARCAD1-203ENST00000394961 SYNE4Q8N205 404 aa8.22□□□□□ -1.09
SMARCAD1-203ENST00000394961 CHMP4AQ9BY43 222 aa8.22□□□□□ -1.09
SMARCAD1-203ENST00000394961 PRAMEF22A3QJZ6 481 aa8.22□□□□□ -1.09
SMARCAD1-203ENST00000394961 ZNF853P0CG23 659 aa8.22□□□□□ -1.09
SMARCAD1-203ENST00000394961 ZC3H15Q8WU90 426 aaKnown RBP8.22□□□□□ -1.09
SMARCAD1-203ENST00000394961 DDX21Q9NR30 783 aaKnown RBP eCLIP8.21□□□□□ -1.09
SMARCAD1-203ENST00000394961 TMEM88BA6NKF7 163 aa8.21□□□□□ -1.1
SMARCAD1-203ENST00000394961 TMPOP42166 694 aaKnown RBP8.21□□□□□ -1.1
SMARCAD1-203ENST00000394961 SF3B3Q15393 1217 aaKnown RBP8.21□□□□□ -1.1
SMARCAD1-203ENST00000394961 ISCA1Q9BUE6 129 aa8.21□□□□□ -1.1
SMARCAD1-203ENST00000394961 PPEF1O14829 653 aaPredicted RBP8.2□□□□□ -1.1
SMARCAD1-203ENST00000394961 SUSD4Q5VX71 490 aa8.2□□□□□ -1.1
SMARCAD1-203ENST00000394961 MAPK8IP3Q9UPT6 1336 aa8.2□□□□□ -1.1
SMARCAD1-203ENST00000394961 COL1A1P02452 1464 aaPredicted RBP8.2□□□□□ -1.1
SMARCAD1-203ENST00000394961 EPHX2P34913 555 aa8.2□□□□□ -1.1
SMARCAD1-203ENST00000394961 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
SMARCAD1-203ENST00000394961 RUNDC1Q96C34 613 aa8.2□□□□□ -1.1
SMARCAD1-203ENST00000394961 AKAP11Q9UKA4 1901 aa8.2□□□□□ -1.1
SMARCAD1-203ENST00000394961 SCN9AQ15858 1988 aa8.2□□□□□ -1.1
SMARCAD1-203ENST00000394961 TCIRG1Q13488 830 aa8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 UTP14AQ9BVJ6 771 aaKnown RBP8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 HSPA1AP0DMV8 641 aaKnown RBP8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 HSPA1BP0DMV9 641 aaKnown RBP8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 HSP90B1P14625 803 aaKnown RBP8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 KIAA2012Q0VF49 1180 aa8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 CCDC27Q2M243 656 aa8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 PLBD2Q8NHP8 589 aa8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 WBP1LQ9NX94 342 aa8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 PODXL2Q9NZ53 605 aa8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 DDNO94850 711 aaPredicted RBP8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 NLRP10Q86W26 655 aa8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 TRIM35Q9UPQ4 493 aa8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 ABCC4O15439 1325 aa8.19□□□□□ -1.1
SMARCAD1-203ENST00000394961 RPS12P25398 132 aaKnown RBP8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 SCNN1DP51172 638 aa8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 EIF6P56537 245 aaKnown RBP8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 GRAPQ13588 217 aa8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 TTLL7Q6ZT98 887 aa8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 GRAPLQ8TC17 118 aaPredicted RBP8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 RPGRQ92834 1020 aaKnown RBP8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 TLL2Q9Y6L7 1015 aa8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 CALD1Q05682 793 aaKnown RBP8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 DPF2Q92785 391 aa8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 ADARB2Q9NS39 739 aaKnown RBP8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 CTCFP49711 727 aaPredicted RBP8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 DCTN1Q14203 1278 aa8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 CFAP44Q96MT7 982 aa8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 NLRP3Q96P20 1036 aa8.18□□□□□ -1.1
SMARCAD1-203ENST00000394961 CA12O43570 354 aa8.17□□□□□ -1.1
SMARCAD1-203ENST00000394961 IFT57Q9NWB7 429 aa8.17□□□□□ -1.1
SMARCAD1-203ENST00000394961 HYPKQ9NX55 129 aa8.17□□□□□ -1.1
SMARCAD1-203ENST00000394961 ZNRF3Q9ULT6 936 aa8.17□□□□□ -1.1
SMARCAD1-203ENST00000394961 IL16Q14005 1332 aa8.17□□□□□ -1.1
SMARCAD1-203ENST00000394961 MAP2K2P36507 400 aa8.17□□□□□ -1.1
SMARCAD1-203ENST00000394961 REM2Q8IYK8 340 aaPredicted RBP8.17□□□□□ -1.1
SMARCAD1-203ENST00000394961 TSPYL4Q9UJ04 414 aa8.17□□□□□ -1.1
SMARCAD1-203ENST00000394961 JDP2Q8WYK2 163 aa8.17□□□□□ -1.1
SMARCAD1-203ENST00000394961 GPRC5DQ9NZD1 345 aa8.17□□□□□ -1.1
SMARCAD1-203ENST00000394961 WWC3Q9ULE0 1092 aa8.17□□□□□ -1.1
SMARCAD1-203ENST00000394961 SH3TC1Q8TE82 1336 aa8.16□□□□□ -1.1
SMARCAD1-203ENST00000394961 RGS19P49795 217 aa8.16□□□□□ -1.1
SMARCAD1-203ENST00000394961 MAP2K1Q02750 393 aaPredicted RBP8.16□□□□□ -1.1
SMARCAD1-203ENST00000394961 ECE1P42892 770 aa8.16□□□□□ -1.1
SMARCAD1-203ENST00000394961 RIPK4P57078 832 aa8.16□□□□□ -1.1
SMARCAD1-203ENST00000394961 TNIP1Q15025 636 aa8.16□□□□□ -1.1
SMARCAD1-203ENST00000394961 ZNF277Q9NRM2 450 aaPredicted RBP8.16□□□□□ -1.1
SMARCAD1-203ENST00000394961 SAGE1Q9NXZ1 904 aa8.16□□□□□ -1.1
SMARCAD1-203ENST00000394961 DBF4Q9UBU7 674 aaPredicted RBP8.16□□□□□ -1.1
SMARCAD1-203ENST00000394961 NIM1KQ8IY84 436 aa8.16□□□□□ -1.1
SMARCAD1-203ENST00000394961 PITPNM2Q9BZ72 1349 aa8.15□□□□□ -1.1
SMARCAD1-203ENST00000394961 LMOD1P29536 600 aaPredicted RBP8.15□□□□□ -1.1
SMARCAD1-203ENST00000394961 COL13A1Q5TAT6 717 aaPredicted RBP8.15□□□□□ -1.1
SMARCAD1-203ENST00000394961 CNTROBQ8N137 903 aa8.15□□□□□ -1.1
SMARCAD1-203ENST00000394961 ZBTB22O15209 634 aa8.15□□□□□ -1.11
SMARCAD1-203ENST00000394961 HSPA8P11142 646 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms