RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 UBE2HP62256 183 aa12.56□□□□□ -0.4
ACTN1-203ENST00000394419 POLA2Q14181 598 aa12.56□□□□□ -0.4
ACTN1-203ENST00000394419 DDX46Q7L014 1031 aaKnown RBP12.56□□□□□ -0.4
ACTN1-203ENST00000394419 NOL7Q9UMY1 257 aaKnown RBP12.56□□□□□ -0.4
ACTN1-203ENST00000394419 OFD1O75665 1012 aa12.56□□□□□ -0.4
ACTN1-203ENST00000394419 KRT85P78386 507 aa12.56□□□□□ -0.4
ACTN1-203ENST00000394419 LARP1Q6PKG0 1096 aaKnown RBP12.56□□□□□ -0.4
ACTN1-203ENST00000394419 A0A087WZG4 1122 aa12.55□□□□□ -0.4
ACTN1-203ENST00000394419 KDM4AO75164 1064 aa12.55□□□□□ -0.4
ACTN1-203ENST00000394419 ME3Q16798 604 aa12.55□□□□□ -0.4
ACTN1-203ENST00000394419 CCDC129Q6ZRS4 1044 aa12.55□□□□□ -0.4
ACTN1-203ENST00000394419 ZSCAN31Q96LW9 406 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-203ENST00000394419 TTC41PQ6P2S7 1318 aa12.55□□□□□ -0.4
ACTN1-203ENST00000394419 CCDC171Q6TFL3 1326 aa12.55□□□□□ -0.4
ACTN1-203ENST00000394419 BABAM1Q9NWV8 329 aa12.54□□□□□ -0.4
ACTN1-203ENST00000394419 A0A0D9SFI3 127 aa12.54□□□□□ -0.4
ACTN1-203ENST00000394419 ALDH1L1O75891 902 aa12.54□□□□□ -0.4
ACTN1-203ENST00000394419 AXIN2Q9Y2T1 843 aa12.54□□□□□ -0.4
ACTN1-203ENST00000394419 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
ACTN1-203ENST00000394419 RIMBP3CA6NJZ7 1639 aa12.54□□□□□ -0.4
ACTN1-203ENST00000394419 RIMBP3BA6NNM3 1639 aa12.54□□□□□ -0.4
ACTN1-203ENST00000394419 RIMBP3Q9UFD9 1639 aa12.54□□□□□ -0.4
ACTN1-203ENST00000394419 AOX1Q06278 1338 aa12.54□□□□□ -0.4
ACTN1-203ENST00000394419 ANKRD13DQ6ZTN6 518 aa12.54□□□□□ -0.4
ACTN1-203ENST00000394419 SPATA32Q96LK8 384 aa12.54□□□□□ -0.4
ACTN1-203ENST00000394419 HIP1O00291 1037 aa12.53□□□□□ -0.4
ACTN1-203ENST00000394419 RRP9O43818 475 aaKnown RBP12.53□□□□□ -0.4
ACTN1-203ENST00000394419 CABP4P57796 275 aa12.53□□□□□ -0.4
ACTN1-203ENST00000394419 GUCY1B3Q02153 619 aa12.53□□□□□ -0.4
ACTN1-203ENST00000394419 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
ACTN1-203ENST00000394419 SH2B1Q9NRF2 756 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-203ENST00000394419 TPCN1Q9ULQ1 816 aa12.53□□□□□ -0.4
ACTN1-203ENST00000394419 FAM177BA6PVY3 158 aa12.53□□□□□ -0.4
ACTN1-203ENST00000394419 SASH1O94885 1247 aa12.53□□□□□ -0.4
ACTN1-203ENST00000394419 TNMDQ9H2S6 317 aa12.53□□□□□ -0.4
ACTN1-203ENST00000394419 USP16Q9Y5T5 823 aa12.53□□□□□ -0.4
ACTN1-203ENST00000394419 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.52□□□□□ -0.4
ACTN1-203ENST00000394419 CCDC192P0DO97 292 aa12.52□□□□□ -0.4
ACTN1-203ENST00000394419 ATF3P18847 181 aa12.52□□□□□ -0.4
ACTN1-203ENST00000394419 PDCP20941 246 aa12.52□□□□□ -0.4
ACTN1-203ENST00000394419 TFCP2Q12800 502 aa12.52□□□□□ -0.4
ACTN1-203ENST00000394419 TAF7LQ5H9L4 462 aa12.52□□□□□ -0.4
ACTN1-203ENST00000394419 VPS53Q5VIR6 699 aa12.52□□□□□ -0.4
ACTN1-203ENST00000394419 ZNF790Q6PG37 636 aa12.52□□□□□ -0.4
ACTN1-203ENST00000394419 SLC27A2O14975 620 aa12.52□□□□□ -0.41
ACTN1-203ENST00000394419 CHGBP05060 677 aa12.52□□□□□ -0.41
ACTN1-203ENST00000394419 CCT2P78371 535 aaKnown RBP12.52□□□□□ -0.41
ACTN1-203ENST00000394419 CDC37L1Q7L3B6 337 aa12.52□□□□□ -0.41
ACTN1-203ENST00000394419 ZNF496Q96IT1 587 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-203ENST00000394419 SEC62Q99442 399 aaKnown RBP12.52□□□□□ -0.41
ACTN1-203ENST00000394419 ADCY9O60503 1353 aa12.52□□□□□ -0.41
ACTN1-203ENST00000394419 HOXB7P09629 217 aa12.52□□□□□ -0.41
ACTN1-203ENST00000394419 ZRSR1Q15695 479 aaKnown RBP12.52□□□□□ -0.41
ACTN1-203ENST00000394419 NUP62CLQ9H1M0 184 aa12.52□□□□□ -0.41
ACTN1-203ENST00000394419 LETM1O95202 739 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-203ENST00000394419 CHST3Q7LGC8 479 aa12.51□□□□□ -0.41
ACTN1-203ENST00000394419 TRIM5Q9C035 493 aa12.51□□□□□ -0.41
ACTN1-203ENST00000394419 ZBTB3Q9H5J0 574 aa12.51□□□□□ -0.41
ACTN1-203ENST00000394419 MTMR6Q9Y217 621 aa12.51□□□□□ -0.41
ACTN1-203ENST00000394419 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-203ENST00000394419 NRXN3Q9Y4C0 1643 aa12.51□□□□□ -0.41
ACTN1-203ENST00000394419 SSH2Q76I76 1423 aa12.51□□□□□ -0.41
ACTN1-203ENST00000394419 GOLIM4O00461 696 aa12.51□□□□□ -0.41
ACTN1-203ENST00000394419 FKBP4Q02790 459 aaKnown RBP eCLIP12.51□□□□□ -0.41
ACTN1-203ENST00000394419 CHAF1AQ13111 956 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-203ENST00000394419 TSC1Q92574 1164 aa12.51□□□□□ -0.41
ACTN1-203ENST00000394419 NRKQ7Z2Y5 1582 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 WASHC4Q2M389 1173 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 SASS6Q6UVJ0 657 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 LMBR1LQ6UX01 489 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 ZNF589Q86UQ0 364 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-203ENST00000394419 BRF1Q92994 677 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 SNRKQ9NRH2 765 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 DACT1Q9NYF0 836 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 C3P01024 1663 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 EPHA10Q5JZY3 1008 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 TTC14Q96N46 770 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 DBNDD2Q9BQY9 259 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 TAF6LQ9Y6J9 622 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 PEAK1Q9H792 1746 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 KAT6BQ8WYB5 2073 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 JAK2O60674 1132 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 TIMM10P62072 90 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 ANKRD1Q15327 319 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 SLFNL1Q499Z3 407 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 ARHGEF25Q86VW2 580 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 RAB11FIP4Q86YS3 637 aa12.5□□□□□ -0.41
ACTN1-203ENST00000394419 GOLGA6L6A8MZA4 724 aa12.49□□□□□ -0.41
ACTN1-203ENST00000394419 HS1BP3Q53T59 392 aa12.49□□□□□ -0.41
ACTN1-203ENST00000394419 COL9A3Q14050 684 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-203ENST00000394419 GCKRQ14397 625 aa12.49□□□□□ -0.41
ACTN1-203ENST00000394419 ZSWIM6Q9HCJ5 1215 aa12.49□□□□□ -0.41
ACTN1-203ENST00000394419 Q6ZUG5 572 aa12.49□□□□□ -0.41
ACTN1-203ENST00000394419 ZNF592Q92610 1267 aa12.49□□□□□ -0.41
ACTN1-203ENST00000394419 PDLIM2Q96JY6 352 aa12.49□□□□□ -0.41
ACTN1-203ENST00000394419 NEK1Q96PY6 1258 aa12.49□□□□□ -0.41
ACTN1-203ENST00000394419 MON2Q7Z3U7 1717 aa12.49□□□□□ -0.41
ACTN1-203ENST00000394419 NEURL1BA8MQ27 555 aa12.48□□□□□ -0.41
ACTN1-203ENST00000394419 IGKV5-2P06315 115 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms