RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 SNRPA1P09661 255 aaKnown RBP23.54■■□□□ 1.36
RCCD1-201ENST00000394258 KCNJ4P48050 445 aa23.54■■□□□ 1.36
RCCD1-201ENST00000394258 LARGE1O95461 756 aa23.53■■□□□ 1.36
RCCD1-201ENST00000394258 LIMCH1Q9UPQ0 1083 aa23.53■■□□□ 1.36
RCCD1-201ENST00000394258 NMIQ13287 307 aaPredicted RBP23.53■■□□□ 1.36
RCCD1-201ENST00000394258 RNF214Q8ND24 703 aa23.53■■□□□ 1.36
RCCD1-201ENST00000394258 EDC3Q96F86 508 aaKnown RBP23.53■■□□□ 1.36
RCCD1-201ENST00000394258 TCHHQ07283 1943 aa23.53■■□□□ 1.36
RCCD1-201ENST00000394258 CAMTA1Q9Y6Y1 1673 aa23.52■■□□□ 1.36
RCCD1-201ENST00000394258 CABP4P57796 275 aa23.52■■□□□ 1.36
RCCD1-201ENST00000394258 UBE3BQ7Z3V4 1068 aa23.52■■□□□ 1.36
RCCD1-201ENST00000394258 DCAF5Q96JK2 942 aa23.52■■□□□ 1.36
RCCD1-201ENST00000394258 LRSAM1Q6UWE0 723 aa23.52■■□□□ 1.36
RCCD1-201ENST00000394258 FSD1Q9BTV5 496 aa23.51■■□□□ 1.35
RCCD1-201ENST00000394258 RPAP1Q9BWH6 1393 aaPredicted RBP23.51■■□□□ 1.35
RCCD1-201ENST00000394258 NDUFB9Q9Y6M9 179 aa23.51■■□□□ 1.35
RCCD1-201ENST00000394258 KIF1AQ12756 1690 aa23.5■■□□□ 1.35
RCCD1-201ENST00000394258 ALS2Q96Q42 1657 aa23.5■■□□□ 1.35
RCCD1-201ENST00000394258 COL9A3Q14050 684 aaPredicted RBP23.5■■□□□ 1.35
RCCD1-201ENST00000394258 FMNL2Q96PY5 1086 aa23.5■■□□□ 1.35
RCCD1-201ENST00000394258 PDRG1Q9NUG6 133 aa23.5■■□□□ 1.35
RCCD1-201ENST00000394258 CCDC9Q9Y3X0 531 aaKnown RBP23.5■■□□□ 1.35
RCCD1-201ENST00000394258 WDR33Q9C0J8 1336 aaKnown RBP23.5■■□□□ 1.35
RCCD1-201ENST00000394258 C5P01031 1676 aa23.5■■□□□ 1.35
RCCD1-201ENST00000394258 HSPA2P54652 639 aa23.5■■□□□ 1.35
RCCD1-201ENST00000394258 USP48Q86UV5 1035 aa23.5■■□□□ 1.35
RCCD1-201ENST00000394258 CCDC83Q8IWF9 413 aa23.5■■□□□ 1.35
RCCD1-201ENST00000394258 RBM8AQ9Y5S9 174 aaKnown RBP23.5■■□□□ 1.35
RCCD1-201ENST00000394258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.49■■□□□ 1.351e-8■■□□□ 11.4
RCCD1-201ENST00000394258 CCDC171Q6TFL3 1326 aa23.49■■□□□ 1.35
RCCD1-201ENST00000394258 A0A0D9SFI3 127 aa23.49■■□□□ 1.35
RCCD1-201ENST00000394258 LRP10Q7Z4F1 713 aa23.49■■□□□ 1.35
RCCD1-201ENST00000394258 SMC3Q9UQE7 1217 aa23.48■■□□□ 1.35
RCCD1-201ENST00000394258 MBD3O95983 291 aa23.48■■□□□ 1.35
RCCD1-201ENST00000394258 SCN11AQ9UI33 1791 aa23.48■■□□□ 1.35
RCCD1-201ENST00000394258 A0A087WZG4 1122 aa23.47■■□□□ 1.35
RCCD1-201ENST00000394258 NECTIN1Q15223 517 aa23.47■■□□□ 1.35
RCCD1-201ENST00000394258 TCEANC2Q96MN5 208 aa23.47■■□□□ 1.35
RCCD1-201ENST00000394258 CYP46A1Q9Y6A2 500 aa23.47■■□□□ 1.35
RCCD1-201ENST00000394258 SYT1P21579 422 aa23.47■■□□□ 1.35
RCCD1-201ENST00000394258 CADPS2Q86UW7 1296 aa23.47■■□□□ 1.35
RCCD1-201ENST00000394258 ZKSCAN1P17029 563 aaPredicted RBP23.46■■□□□ 1.35
RCCD1-201ENST00000394258 TFCP2Q12800 502 aa23.46■■□□□ 1.35
RCCD1-201ENST00000394258 CREB3L3Q68CJ9 461 aa23.46■■□□□ 1.35
RCCD1-201ENST00000394258 CNPY2Q9Y2B0 182 aa23.46■■□□□ 1.35
RCCD1-201ENST00000394258 ZSCAN30Q86W11 494 aa23.46■■□□□ 1.35
RCCD1-201ENST00000394258 NECAB1Q8N987 351 aa23.46■■□□□ 1.35
RCCD1-201ENST00000394258 ADAMTS7Q9UKP4 1686 aa23.46■■□□□ 1.35
RCCD1-201ENST00000394258 CHMP3Q9Y3E7 222 aa23.46■■□□□ 1.35
RCCD1-201ENST00000394258 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.46■■□□□ 1.35
RCCD1-201ENST00000394258 STX6O43752 255 aa23.45■■□□□ 1.34
RCCD1-201ENST00000394258 ZSWIM6Q9HCJ5 1215 aa23.45■■□□□ 1.34
RCCD1-201ENST00000394258 TAF6LQ9Y6J9 622 aa23.45■■□□□ 1.34
RCCD1-201ENST00000394258 CHGBP05060 677 aa23.45■■□□□ 1.34
RCCD1-201ENST00000394258 PTPN12Q05209 780 aaKnown RBP23.45■■□□□ 1.34
RCCD1-201ENST00000394258 CRYBG1Q9Y4K1 1723 aa23.45■■□□□ 1.34
RCCD1-201ENST00000394258 ZSCAN22P10073 491 aaPredicted RBP23.44■■□□□ 1.34
RCCD1-201ENST00000394258 ZNF589Q86UQ0 364 aaPredicted RBP23.44■■□□□ 1.34
RCCD1-201ENST00000394258 MAP4K1Q92918 833 aa23.44■■□□□ 1.34
RCCD1-201ENST00000394258 DBNLQ9UJU6 430 aaKnown RBP23.44■■□□□ 1.34
RCCD1-201ENST00000394258 SPATA31A3Q5VYP0 1347 aa23.44■■□□□ 1.34
RCCD1-201ENST00000394258 RBM10P98175 930 aaKnown RBP23.44■■□□□ 1.34
RCCD1-201ENST00000394258 VPS53Q5VIR6 699 aa23.44■■□□□ 1.34
RCCD1-201ENST00000394258 GJB2P29033 226 aa23.43■■□□□ 1.34
RCCD1-201ENST00000394258 PDLIM2Q96JY6 352 aa23.43■■□□□ 1.34
RCCD1-201ENST00000394258 TOM1L2Q6ZVM7 507 aa23.43■■□□□ 1.34
RCCD1-201ENST00000394258 TNS3Q68CZ2 1445 aa23.43■■□□□ 1.34
RCCD1-201ENST00000394258 SLC27A2O14975 620 aa23.42■■□□□ 1.34
RCCD1-201ENST00000394258 RFX5P48382 616 aaPredicted RBP23.42■■□□□ 1.34
RCCD1-201ENST00000394258 ME3Q16798 604 aa23.42■■□□□ 1.34
RCCD1-201ENST00000394258 HIP1O00291 1037 aa23.42■■□□□ 1.34
RCCD1-201ENST00000394258 DNAJC2Q99543 621 aaKnown RBP23.42■■□□□ 1.34
RCCD1-201ENST00000394258 COPRSQ9NQ92 184 aa23.42■■□□□ 1.34
RCCD1-201ENST00000394258 PRDM11Q9NQV5 511 aa23.42■■□□□ 1.34
RCCD1-201ENST00000394258 TNNI3KQ59H18 835 aa23.41■■□□□ 1.34
RCCD1-201ENST00000394258 LMBR1LQ6UX01 489 aa23.41■■□□□ 1.34
RCCD1-201ENST00000394258 FPGT-TNNI3KV9GXZ4 949 aa23.41■■□□□ 1.34
RCCD1-201ENST00000394258 COL18A1P39060 1754 aa23.41■■□□□ 1.34
RCCD1-201ENST00000394258 NBPF26B4DH59 902 aa23.41■■□□□ 1.34
RCCD1-201ENST00000394258 NBPF14Q5TI25 921 aa23.41■■□□□ 1.34
RCCD1-201ENST00000394258 NBPF10Q6P3W6 841 aaKnown RBP23.41■■□□□ 1.34
RCCD1-201ENST00000394258 NBPF15Q8N660 670 aa23.41■■□□□ 1.34
RCCD1-201ENST00000394258 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.41■■□□□ 1.34
RCCD1-201ENST00000394258 STRCP1A6NGW2 1772 aa23.4■■□□□ 1.34
RCCD1-201ENST00000394258 FIBPO43427 364 aa23.4■■□□□ 1.34
RCCD1-201ENST00000394258 MSNP26038 577 aaKnown RBP23.4■■□□□ 1.34
RCCD1-201ENST00000394258 TTLL7Q6ZT98 887 aa23.4■■□□□ 1.34
RCCD1-201ENST00000394258 DBNDD2Q9BQY9 259 aa23.4■■□□□ 1.34
RCCD1-201ENST00000394258 TPCN1Q9ULQ1 816 aa23.4■■□□□ 1.34
RCCD1-201ENST00000394258 A1BGP04217 495 aa23.4■■□□□ 1.34
RCCD1-201ENST00000394258 TM6SF1Q9BZW5 370 aa23.4■■□□□ 1.34
RCCD1-201ENST00000394258 ST3GAL1Q11201 340 aa23.39■■□□□ 1.34
RCCD1-201ENST00000394258 KCNB2Q92953 911 aa23.39■■□□□ 1.34
RCCD1-201ENST00000394258 TSPY26PQ9H489 355 aa23.39■■□□□ 1.34
RCCD1-201ENST00000394258 PLBD2Q8NHP8 589 aa23.39■■□□□ 1.33
RCCD1-201ENST00000394258 VPS37CA5D8V6 355 aaPredicted RBP23.38■■□□□ 1.33
RCCD1-201ENST00000394258 F13A1P00488 732 aa23.38■■□□□ 1.33
RCCD1-201ENST00000394258 LMTK3Q96Q04 1460 aa23.38■■□□□ 1.33
RCCD1-201ENST00000394258 ZBTB3Q9H5J0 574 aa23.38■■□□□ 1.33
RCCD1-201ENST00000394258 CCDC129Q6ZRS4 1044 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms