RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 CASC1Q6TDU7 716 aa21.97■■□□□ 1.11
CLDND1-204ENST00000394185 USP26Q9BXU7 913 aa21.97■■□□□ 1.11
CLDND1-204ENST00000394185 USP21Q9UK80 565 aa21.97■■□□□ 1.11
CLDND1-204ENST00000394185 MAP3K15Q6ZN16 1313 aa21.96■■□□□ 1.11
CLDND1-204ENST00000394185 HSPA1LP34931 641 aa21.96■■□□□ 1.11
CLDND1-204ENST00000394185 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
CLDND1-204ENST00000394185 CCDC8Q9H0W5 538 aaPredicted RBP21.96■■□□□ 1.11
CLDND1-204ENST00000394185 COPRSQ9NQ92 184 aa21.96■■□□□ 1.11
CLDND1-204ENST00000394185 CHMP3Q9Y3E7 222 aa21.96■■□□□ 1.11
CLDND1-204ENST00000394185 MYT1Q01538 1121 aa21.95■■□□□ 1.1
CLDND1-204ENST00000394185 USP42Q9H9J4 1324 aaKnown RBP21.95■■□□□ 1.1
CLDND1-204ENST00000394185 IFIT2P09913 472 aaKnown RBP21.95■■□□□ 1.1
CLDND1-204ENST00000394185 CHMLP26374 656 aa21.95■■□□□ 1.1
CLDND1-204ENST00000394185 ATP6V1AP38606 617 aa21.95■■□□□ 1.1
CLDND1-204ENST00000394185 PTF1AQ7RTS3 328 aa21.95■■□□□ 1.1
CLDND1-204ENST00000394185 SPATA31A6Q5VVP1 1343 aa21.94■■□□□ 1.1
CLDND1-204ENST00000394185 LOC102724428A0A0B4J2F2 783 aa21.94■■□□□ 1.1
CLDND1-204ENST00000394185 GPTP24298 496 aa21.94■■□□□ 1.1
CLDND1-204ENST00000394185 SIK1P57059 783 aa21.94■■□□□ 1.1
CLDND1-204ENST00000394185 ITPK1Q13572 414 aa21.94■■□□□ 1.1
CLDND1-204ENST00000394185 IL25Q9H293 177 aa21.94■■□□□ 1.1
CLDND1-204ENST00000394185 TBC1D2BQ9UPU7 963 aa21.94■■□□□ 1.1
CLDND1-204ENST00000394185 SYNE4Q8N205 404 aa21.94■■□□□ 1.1
CLDND1-204ENST00000394185 FAM89AQ96GI7 184 aa21.94■■□□□ 1.1
CLDND1-204ENST00000394185 ERC2O15083 957 aa21.93■■□□□ 1.1
CLDND1-204ENST00000394185 INTS5Q6P9B9 1019 aaKnown RBP21.93■■□□□ 1.1
CLDND1-204ENST00000394185 GIGYF2Q6Y7W6 1299 aaKnown RBP21.93■■□□□ 1.1
CLDND1-204ENST00000394185 PALLDQ8WX93 1383 aa21.93■■□□□ 1.1
CLDND1-204ENST00000394185 FAM182BQ5T319 152 aa21.92■■□□□ 1.1
CLDND1-204ENST00000394185 SPRYD3Q8NCJ5 442 aa21.92■■□□□ 1.1
CLDND1-204ENST00000394185 ESYT1Q9BSJ8 1104 aa21.92■■□□□ 1.1
CLDND1-204ENST00000394185 TTC41PQ6P2S7 1318 aa21.92■■□□□ 1.1
CLDND1-204ENST00000394185 CD2BP2O95400 341 aaKnown RBP21.92■■□□□ 1.1
CLDND1-204ENST00000394185 ECHDC1Q9NTX5 307 aa21.92■■□□□ 1.1
CLDND1-204ENST00000394185 CRKLP46109 303 aaKnown RBP21.91■■□□□ 1.1
CLDND1-204ENST00000394185 TFCP2Q12800 502 aa21.91■■□□□ 1.1
CLDND1-204ENST00000394185 SLKQ9H2G2 1235 aaPredicted RBP21.91■■□□□ 1.1
CLDND1-204ENST00000394185 IL6STP40189 918 aaPredicted RBP21.91■■□□□ 1.1
CLDND1-204ENST00000394185 TRIM28Q13263 835 aaKnown RBP21.91■■□□□ 1.1
CLDND1-204ENST00000394185 KCNQ4P56696 695 aa21.9■■□□□ 1.1
CLDND1-204ENST00000394185 DZIP3Q86Y13 1208 aaKnown RBP21.9■■□□□ 1.1
CLDND1-204ENST00000394185 ZNF594Q96JF6 807 aaPredicted RBP21.9■■□□□ 1.1
CLDND1-204ENST00000394185 GLRX3O76003 335 aaKnown RBP21.89■■□□□ 1.1
CLDND1-204ENST00000394185 CCDC85AQ96PX6 553 aaPredicted RBP21.89■■□□□ 1.1
CLDND1-204ENST00000394185 REC8O95072 547 aa21.89■■□□□ 1.09
CLDND1-204ENST00000394185 NLRP10Q86W26 655 aa21.89■■□□□ 1.09
CLDND1-204ENST00000394185 EIF5P55010 431 aaKnown RBP21.88■■□□□ 1.09
CLDND1-204ENST00000394185 MEX3CQ5U5Q3 659 aaKnown RBP21.88■■□□□ 1.09
CLDND1-204ENST00000394185 CCDC87Q9NVE4 849 aa21.88■■□□□ 1.09
CLDND1-204ENST00000394185 PCCAP05165 728 aaPredicted RBP21.87■■□□□ 1.09
CLDND1-204ENST00000394185 ATG9AQ7Z3C6 839 aa21.87■■□□□ 1.09
CLDND1-204ENST00000394185 CNTROBQ8N137 903 aa21.87■■□□□ 1.09
CLDND1-204ENST00000394185 ZBTB38Q8NAP3 1195 aaPredicted RBP21.87■■□□□ 1.09
CLDND1-204ENST00000394185 LRRC24Q50LG9 513 aa21.87■■□□□ 1.09
CLDND1-204ENST00000394185 TNNI3KQ59H18 835 aa21.87■■□□□ 1.09
CLDND1-204ENST00000394185 GPATCH3Q96I76 525 aa21.87■■□□□ 1.09
CLDND1-204ENST00000394185 DBNLQ9UJU6 430 aaKnown RBP21.87■■□□□ 1.09
CLDND1-204ENST00000394185 FPGT-TNNI3KV9GXZ4 949 aa21.87■■□□□ 1.09
CLDND1-204ENST00000394185 UBN2Q6ZU65 1347 aa21.86■■□□□ 1.09
CLDND1-204ENST00000394185 MYH14Q7Z406 1995 aaKnown RBP21.86■■□□□ 1.09
CLDND1-204ENST00000394185 AK9Q5TCS8 1911 aa21.86■■□□□ 1.09
CLDND1-204ENST00000394185 HSCBQ8IWL3 235 aa21.85■■□□□ 1.09
CLDND1-204ENST00000394185 ANO2Q9NQ90 1003 aa21.85■■□□□ 1.09
CLDND1-204ENST00000394185 PUS3Q9BZE2 481 aaKnown RBP21.85■■□□□ 1.09
CLDND1-204ENST00000394185 BOLA2Q9H3K6 86 aa21.85■■□□□ 1.09
CLDND1-204ENST00000394185 SNX21Q969T3 373 aa21.84■■□□□ 1.09
CLDND1-204ENST00000394185 ANTXR1Q9H6X2 564 aa21.84■■□□□ 1.09
CLDND1-204ENST00000394185 AFF2P51816 1311 aa21.84■■□□□ 1.09
CLDND1-204ENST00000394185 NUP98P52948 1817 aa21.84■■□□□ 1.09
CLDND1-204ENST00000394185 EIF5BO60841 1220 aaKnown RBP21.84■■□□□ 1.09
CLDND1-204ENST00000394185 THSD7AQ9UPZ6 1657 aa21.83■■□□□ 1.09
CLDND1-204ENST00000394185 ERVV-1B6SEH8 477 aa21.83■■□□□ 1.09
CLDND1-204ENST00000394185 HSP90AB3PQ58FF7 597 aa21.83■■□□□ 1.09
CLDND1-204ENST00000394185 CWC27Q6UX04 472 aaKnown RBP21.82■■□□□ 1.08
CLDND1-204ENST00000394185 LINC00116Q8NCU8 138 aa21.82■■□□□ 1.08
CLDND1-204ENST00000394185 GJD4Q96KN9 370 aaPredicted RBP21.82■■□□□ 1.08
CLDND1-204ENST00000394185 DBNDD2Q9BQY9 259 aa21.82■■□□□ 1.08
CLDND1-204ENST00000394185 NDUFB9Q9Y6M9 179 aa21.82■■□□□ 1.08
CLDND1-204ENST00000394185 SMIM5Q71RC9 77 aa21.82■■□□□ 1.08
CLDND1-204ENST00000394185 SMARCC1Q92922 1105 aaPredicted RBP21.82■■□□□ 1.08
CLDND1-204ENST00000394185 EDC3Q96F86 508 aaKnown RBP21.82■■□□□ 1.08
CLDND1-204ENST00000394185 TRMT112Q9UI30 125 aaKnown RBP21.82■■□□□ 1.08
CLDND1-204ENST00000394185 PALD1Q9ULE6 856 aa21.82■■□□□ 1.08
CLDND1-204ENST00000394185 ANKRD36CQ5JPF3 1778 aa21.82■■□□□ 1.08
CLDND1-204ENST00000394185 ZNF34Q8IZ26 560 aa21.81■■□□□ 1.08
CLDND1-204ENST00000394185 PLA2G12BQ9BX93 195 aa21.81■■□□□ 1.08
CLDND1-204ENST00000394185 EYA2O00167 538 aa21.8■■□□□ 1.08
CLDND1-204ENST00000394185 SGSM2O43147 1006 aa21.8■■□□□ 1.08
CLDND1-204ENST00000394185 CAMTA2O94983 1202 aa21.8■■□□□ 1.08
CLDND1-204ENST00000394185 CSF1RP07333 972 aa21.8■■□□□ 1.08
CLDND1-204ENST00000394185 CCDC57Q2TAC2 916 aa21.8■■□□□ 1.08
CLDND1-204ENST00000394185 RREB1Q92766 1687 aa21.8■■□□□ 1.08
CLDND1-204ENST00000394185 FAM177BA6PVY3 158 aa21.8■■□□□ 1.08
CLDND1-204ENST00000394185 CDHR2Q9BYE9 1310 aa21.79■■□□□ 1.08
CLDND1-204ENST00000394185 IRS4O14654 1257 aaPredicted RBP21.79■■□□□ 1.08
CLDND1-204ENST00000394185 TIMM10P62072 90 aa21.79■■□□□ 1.08
CLDND1-204ENST00000394185 EVI5LQ96CN4 794 aa21.79■■□□□ 1.08
CLDND1-204ENST00000394185 GREM2Q9H772 168 aa21.79■■□□□ 1.08
CLDND1-204ENST00000394185 CICQ96RK0 1608 aaPredicted RBP21.79■■□□□ 1.08
CLDND1-204ENST00000394185 IL15P40933 162 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms