RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 BAG4O95429 457 aaKnown RBP10.96□□□□□ -0.66
TDP1-202ENST00000393452 SKOR2Q2VWA4 1001 aaPredicted RBP10.96□□□□□ -0.66
TDP1-202ENST00000393452 TTLL7Q6ZT98 887 aa10.96□□□□□ -0.66
TDP1-202ENST00000393452 KIAA1211Q6ZU35 1233 aa10.96□□□□□ -0.66
TDP1-202ENST00000393452 ILDR2Q71H61 639 aa10.96□□□□□ -0.66
TDP1-202ENST00000393452 TLR7Q9NYK1 1049 aaKnown RBP10.96□□□□□ -0.66
TDP1-202ENST00000393452 COL14A1Q05707 1796 aaKnown RBP10.96□□□□□ -0.66
TDP1-202ENST00000393452 DISP2A7MBM2 1401 aa10.95□□□□□ -0.66
TDP1-202ENST00000393452 A1BGP04217 495 aa10.95□□□□□ -0.66
TDP1-202ENST00000393452 ITGB4P16144 1822 aa10.95□□□□□ -0.66
TDP1-202ENST00000393452 CCDC8Q9H0W5 538 aaPredicted RBP10.95□□□□□ -0.66
TDP1-202ENST00000393452 SNX14Q9Y5W7 946 aa10.95□□□□□ -0.66
TDP1-202ENST00000393452 HIP1O00291 1037 aa10.95□□□□□ -0.66
TDP1-202ENST00000393452 FOXO4P98177 505 aa10.95□□□□□ -0.66
TDP1-202ENST00000393452 PKP1Q13835 747 aa10.95□□□□□ -0.66
TDP1-202ENST00000393452 JARID2Q92833 1246 aaPredicted RBP10.95□□□□□ -0.66
TDP1-202ENST00000393452 KCNB2Q92953 911 aa10.95□□□□□ -0.66
TDP1-202ENST00000393452 UPF3BQ9BZI7 483 aaKnown RBP10.95□□□□□ -0.66
TDP1-202ENST00000393452 ZDHHC9Q9Y397 364 aa10.95□□□□□ -0.66
TDP1-202ENST00000393452 COL22A1Q8NFW1 1626 aaPredicted RBP10.94□□□□□ -0.66
TDP1-202ENST00000393452 CCDC191Q8NCU4 936 aa10.94□□□□□ -0.66
TDP1-202ENST00000393452 TTC14Q96N46 770 aa10.94□□□□□ -0.66
TDP1-202ENST00000393452 CWC25Q9NXE8 425 aaPredicted RBP10.94□□□□□ -0.66
TDP1-202ENST00000393452 GOLGA6L22H0YM25 854 aa10.94□□□□□ -0.66
TDP1-202ENST00000393452 TNNI3KQ59H18 835 aa10.94□□□□□ -0.66
TDP1-202ENST00000393452 RASEFQ8IZ41 740 aa10.94□□□□□ -0.66
TDP1-202ENST00000393452 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
TDP1-202ENST00000393452 BTG4Q9NY30 223 aa10.94□□□□□ -0.66
TDP1-202ENST00000393452 TMOD3Q9NYL9 352 aa10.94□□□□□ -0.66
TDP1-202ENST00000393452 FPGT-TNNI3KV9GXZ4 949 aa10.94□□□□□ -0.66
TDP1-202ENST00000393452 PLCH1Q4KWH8 1693 aa10.94□□□□□ -0.66
TDP1-202ENST00000393452 AHDC1Q5TGY3 1603 aaPredicted RBP10.93□□□□□ -0.66
TDP1-202ENST00000393452 LRP6O75581 1613 aa10.93□□□□□ -0.66
TDP1-202ENST00000393452 L1TD1Q5T7N2 865 aaKnown RBP10.93□□□□□ -0.66
TDP1-202ENST00000393452 LMBR1LQ6UX01 489 aa10.93□□□□□ -0.66
TDP1-202ENST00000393452 DBNLQ9UJU6 430 aaKnown RBP10.93□□□□□ -0.66
TDP1-202ENST00000393452 ROBO1Q9Y6N7 1651 aa10.93□□□□□ -0.66
TDP1-202ENST00000393452 ATP5JP18859 108 aa10.92□□□□□ -0.66
TDP1-202ENST00000393452 PTH1RQ03431 593 aa10.92□□□□□ -0.66
TDP1-202ENST00000393452 TFCP2Q12800 502 aa10.92□□□□□ -0.66
TDP1-202ENST00000393452 PIGBQ92521 554 aa10.92□□□□□ -0.66
TDP1-202ENST00000393452 TEX13AQ9BXU3 409 aaPredicted RBP10.92□□□□□ -0.66
TDP1-202ENST00000393452 GZF1Q9H116 711 aaPredicted RBP10.92□□□□□ -0.66
TDP1-202ENST00000393452 BOLA2Q9H3K6 86 aa10.92□□□□□ -0.66
TDP1-202ENST00000393452 COL16A1Q07092 1604 aaPredicted RBP10.92□□□□□ -0.66
TDP1-202ENST00000393452 CCDC171Q6TFL3 1326 aa10.92□□□□□ -0.66
TDP1-202ENST00000393452 NECTIN1Q15223 517 aa10.92□□□□□ -0.66
TDP1-202ENST00000393452 ISY1Q9ULR0 285 aaKnown RBP10.92□□□□□ -0.66
TDP1-202ENST00000393452 NMIQ13287 307 aaPredicted RBP10.91□□□□□ -0.66
TDP1-202ENST00000393452 MAP4K1Q92918 833 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 FAM227BQ96M60 508 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 ISCA1Q9BUE6 129 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 TM6SF1Q9BZW5 370 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 ZBTB3Q9H5J0 574 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 ASAP1Q9ULH1 1129 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 RFX7Q2KHR2 1363 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 JCADQ9P266 1359 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 MED23Q9ULK4 1368 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 GOLGA6L3A6NEY3 463 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 TRIM28Q13263 835 aaKnown RBP10.91□□□□□ -0.66
TDP1-202ENST00000393452 KLHL40Q2TBA0 621 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 ATG9AQ7Z3C6 839 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 ATG3Q9NT62 314 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 BRPF3Q9ULD4 1205 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 WNK3Q9BYP7 1800 aa10.91□□□□□ -0.66
TDP1-202ENST00000393452 BCL9O00512 1426 aa10.9□□□□□ -0.66
TDP1-202ENST00000393452 BRD1O95696 1058 aa10.9□□□□□ -0.66
TDP1-202ENST00000393452 TCIRG1Q13488 830 aa10.9□□□□□ -0.66
TDP1-202ENST00000393452 GPR108Q9NPR9 543 aa10.9□□□□□ -0.66
TDP1-202ENST00000393452 A0A0D9SFI3 127 aa10.9□□□□□ -0.66
TDP1-202ENST00000393452 DNAJC10Q8IXB1 793 aa10.9□□□□□ -0.66
TDP1-202ENST00000393452 FSD1Q9BTV5 496 aa10.9□□□□□ -0.66
TDP1-202ENST00000393452 ZSWIM6Q9HCJ5 1215 aa10.9□□□□□ -0.66
TDP1-202ENST00000393452 LMBRD1Q9NUN5 540 aa10.9□□□□□ -0.66
TDP1-202ENST00000393452 KAT6BQ8WYB5 2073 aa10.9□□□□□ -0.67
TDP1-202ENST00000393452 LTBP4Q8N2S1 1624 aa10.89□□□□□ -0.67
TDP1-202ENST00000393452 AK2P54819 239 aa10.89□□□□□ -0.67
TDP1-202ENST00000393452 DBNDD2Q9BQY9 259 aa10.89□□□□□ -0.67
TDP1-202ENST00000393452 RBM8AQ9Y5S9 174 aaKnown RBP10.89□□□□□ -0.67
TDP1-202ENST00000393452 IL15P40933 162 aaPredicted RBP10.89□□□□□ -0.67
TDP1-202ENST00000393452 ADCK5Q3MIX3 580 aa10.89□□□□□ -0.67
TDP1-202ENST00000393452 VPS53Q5VIR6 699 aa10.89□□□□□ -0.67
TDP1-202ENST00000393452 MCTP1Q6DN14 999 aa10.89□□□□□ -0.67
TDP1-202ENST00000393452 PRPF40BQ6NWY9 871 aaKnown RBP10.89□□□□□ -0.67
TDP1-202ENST00000393452 NOL8Q76FK4 1167 aaKnown RBP10.89□□□□□ -0.67
TDP1-202ENST00000393452 RUFY3Q7L099 469 aa10.89□□□□□ -0.67
TDP1-202ENST00000393452 HAUS7Q99871 368 aa10.89□□□□□ -0.67
TDP1-202ENST00000393452 LIMCH1Q9UPQ0 1083 aa10.89□□□□□ -0.67
TDP1-202ENST00000393452 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.88□□□□□ -0.67
TDP1-202ENST00000393452 RPAP1Q9BWH6 1393 aaPredicted RBP10.88□□□□□ -0.67
TDP1-202ENST00000393452 CIAO1O76071 339 aa10.88□□□□□ -0.67
TDP1-202ENST00000393452 STARD3NLO95772 234 aa10.88□□□□□ -0.67
TDP1-202ENST00000393452 XRCC6P12956 609 aaKnown RBP eCLIP10.88□□□□□ -0.67
TDP1-202ENST00000393452 CASTP20810 708 aaKnown RBP10.88□□□□□ -0.67
TDP1-202ENST00000393452 CREB3L3Q68CJ9 461 aa10.88□□□□□ -0.67
TDP1-202ENST00000393452 TICAM2Q86XR7 235 aa10.88□□□□□ -0.67
TDP1-202ENST00000393452 EYA2O00167 538 aa10.88□□□□□ -0.67
TDP1-202ENST00000393452 ZKSCAN1P17029 563 aaPredicted RBP10.88□□□□□ -0.67
TDP1-202ENST00000393452 EDC3Q96F86 508 aaKnown RBP10.88□□□□□ -0.67
TDP1-202ENST00000393452 PLA2G12BQ9BX93 195 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms