RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 GUCY1B3Q02153 619 aa14.7□□□□□ -0.06
CLTC-202ENST00000393043 CCDC152Q4G0S7 254 aa14.7□□□□□ -0.06
CLTC-202ENST00000393043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.7□□□□□ -0.06
CLTC-202ENST00000393043 HOXB7P09629 217 aa14.69□□□□□ -0.06
CLTC-202ENST00000393043 ZSCAN22P10073 491 aaPredicted RBP14.69□□□□□ -0.06
CLTC-202ENST00000393043 MCM5P33992 734 aa14.69□□□□□ -0.06
CLTC-202ENST00000393043 LMBR1LQ6UX01 489 aa14.69□□□□□ -0.06
CLTC-202ENST00000393043 RPGRQ92834 1020 aaKnown RBP14.69□□□□□ -0.06
CLTC-202ENST00000393043 SFPQP23246 707 aaKnown RBP eCLIP14.69□□□□□ -0.06
CLTC-202ENST00000393043 RDXP35241 583 aaKnown RBP14.69□□□□□ -0.06
CLTC-202ENST00000393043 RBM8AQ9Y5S9 174 aaKnown RBP14.69□□□□□ -0.06
CLTC-202ENST00000393043 RNF123Q5XPI4 1314 aa14.69□□□□□ -0.06
CLTC-202ENST00000393043 MCMDC2Q4G0Z9 681 aa14.69□□□□□ -0.06
CLTC-202ENST00000393043 DDX46Q7L014 1031 aaKnown RBP14.69□□□□□ -0.06
CLTC-202ENST00000393043 PIBF1Q8WXW3 757 aa14.69□□□□□ -0.06
CLTC-202ENST00000393043 TMEM67Q5HYA8 995 aa14.69□□□□□ -0.06
CLTC-202ENST00000393043 PLEKHM2Q8IWE5 1019 aa14.69□□□□□ -0.06
CLTC-202ENST00000393043 FSIP1Q8NA03 581 aa14.69□□□□□ -0.06
CLTC-202ENST00000393043 LARP6Q9BRS8 491 aaKnown RBP14.69□□□□□ -0.06
CLTC-202ENST00000393043 ORC3Q9UBD5 711 aaPredicted RBP14.69□□□□□ -0.06
CLTC-202ENST00000393043 SSBP05455 408 aaKnown RBP eCLIP14.68□□□□□ -0.06
CLTC-202ENST00000393043 UVSSAQ2YD98 709 aa14.68□□□□□ -0.06
CLTC-202ENST00000393043 C16orf71Q8IYS4 520 aaPredicted RBP14.68□□□□□ -0.06
CLTC-202ENST00000393043 BCL11BQ9C0K0 894 aaPredicted RBP14.68□□□□□ -0.06
CLTC-202ENST00000393043 SPTY2D1Q68D10 685 aaPredicted RBP14.68□□□□□ -0.06
CLTC-202ENST00000393043 MFSD6Q6ZSS7 791 aa14.68□□□□□ -0.06
CLTC-202ENST00000393043 SIRT1Q96EB6 747 aa14.68□□□□□ -0.06
CLTC-202ENST00000393043 MYO5CQ9NQX4 1742 aa14.68□□□□□ -0.06
CLTC-202ENST00000393043 RNMTO43148 476 aaKnown RBP14.68□□□□□ -0.06
CLTC-202ENST00000393043 IL2RBP14784 551 aa14.68□□□□□ -0.06
CLTC-202ENST00000393043 ATP2B3Q16720 1220 aa14.68□□□□□ -0.06
CLTC-202ENST00000393043 KRT24Q2M2I5 525 aa14.68□□□□□ -0.06
CLTC-202ENST00000393043 TRIM35Q9UPQ4 493 aa14.68□□□□□ -0.06
CLTC-202ENST00000393043 NCKAP5LQ9HCH0 1330 aa14.68□□□□□ -0.06
CLTC-202ENST00000393043 ZNF76P36508 570 aa14.67□□□□□ -0.06
CLTC-202ENST00000393043 PHF23Q9BUL5 403 aaPredicted RBP14.67□□□□□ -0.06
CLTC-202ENST00000393043 UQCRHLA0A096LP55 91 aa14.67□□□□□ -0.06
CLTC-202ENST00000393043 UQCRHP07919 91 aa14.67□□□□□ -0.06
CLTC-202ENST00000393043 METAP2P50579 478 aaKnown RBP eCLIP14.67□□□□□ -0.061e-8■■□□□ 11.5
CLTC-202ENST00000393043 JARID2Q92833 1246 aaPredicted RBP14.67□□□□□ -0.06
CLTC-202ENST00000393043 RAB34Q9BZG1 259 aa14.67□□□□□ -0.06
CLTC-202ENST00000393043 CHL1O00533 1208 aa14.67□□□□□ -0.06
CLTC-202ENST00000393043 EPB41L2O43491 1005 aaKnown RBP14.67□□□□□ -0.06
CLTC-202ENST00000393043 KIF5BP33176 963 aa14.67□□□□□ -0.06
CLTC-202ENST00000393043 ZFYVE27Q5T4F4 411 aa14.67□□□□□ -0.06
CLTC-202ENST00000393043 NFATC2IPQ8NCF5 419 aa14.67□□□□□ -0.06
CLTC-202ENST00000393043 GDPD2Q9HCC8 539 aa14.67□□□□□ -0.06
CLTC-202ENST00000393043 NEMFO60524 1076 aa14.67□□□□□ -0.06
CLTC-202ENST00000393043 CRACR2BQ8N4Y2 399 aaPredicted RBP14.67□□□□□ -0.06
CLTC-202ENST00000393043 TFIP11Q9UBB9 837 aaKnown RBP14.67□□□□□ -0.06
CLTC-202ENST00000393043 CFAP74Q9C0B2 1584 aa14.67□□□□□ -0.06
CLTC-202ENST00000393043 ERLIN1O75477 346 aa14.66□□□□□ -0.06
CLTC-202ENST00000393043 PDE4BQ07343 736 aa14.66□□□□□ -0.06
CLTC-202ENST00000393043 BRF1Q92994 677 aa14.66□□□□□ -0.06
CLTC-202ENST00000393043 PRM3Q9NNZ6 103 aa14.66□□□□□ -0.06
CLTC-202ENST00000393043 BAG3O95817 575 aa14.66□□□□□ -0.06
CLTC-202ENST00000393043 EIF5P55010 431 aaKnown RBP14.66□□□□□ -0.06
CLTC-202ENST00000393043 NOM1Q5C9Z4 860 aaKnown RBP14.66□□□□□ -0.06
CLTC-202ENST00000393043 CNNM3Q8NE01 707 aa14.66□□□□□ -0.06
CLTC-202ENST00000393043 SMARCC1Q92922 1105 aaPredicted RBP14.66□□□□□ -0.06
CLTC-202ENST00000393043 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.068e-7■□□□□ 9.7
CLTC-202ENST00000393043 RAD50Q92878 1312 aa14.66□□□□□ -0.06
CLTC-202ENST00000393043 STX1AQ16623 288 aa14.66□□□□□ -0.06
CLTC-202ENST00000393043 CCDC194A0A1B0GVG4 234 aa14.66□□□□□ -0.06
CLTC-202ENST00000393043 HAND2P61296 217 aa14.66□□□□□ -0.06
CLTC-202ENST00000393043 PYM1Q9BRP8 204 aaKnown RBP14.66□□□□□ -0.06
CLTC-202ENST00000393043 MPHOSPH10O00566 681 aaKnown RBP14.65□□□□□ -0.06
CLTC-202ENST00000393043 ZSCAN12O43309 604 aa14.65□□□□□ -0.06
CLTC-202ENST00000393043 CKAP2LQ8IYA6 745 aa14.65□□□□□ -0.06
CLTC-202ENST00000393043 NLRP5P59047 1200 aa14.65□□□□□ -0.06
CLTC-202ENST00000393043 IQCEQ6IPM2 695 aa14.65□□□□□ -0.06
CLTC-202ENST00000393043 CCDC12Q8WUD4 166 aaPredicted RBP14.65□□□□□ -0.06
CLTC-202ENST00000393043 KRT23Q9C075 422 aa14.65□□□□□ -0.06
CLTC-202ENST00000393043 KDM5AP29375 1690 aaKnown RBP14.65□□□□□ -0.06
CLTC-202ENST00000393043 TMTC2Q8N394 836 aa14.65□□□□□ -0.06
CLTC-202ENST00000393043 CCDC82Q8N4S0 544 aa14.65□□□□□ -0.06
CLTC-202ENST00000393043 TMEM132AQ24JP5 1023 aa14.65□□□□□ -0.06
CLTC-202ENST00000393043 CCDC181Q5TID7 509 aa14.65□□□□□ -0.06
CLTC-202ENST00000393043 CNNM2Q9H8M5 875 aa14.65□□□□□ -0.06
CLTC-202ENST00000393043 USP25Q9UHP3 1055 aa14.65□□□□□ -0.07
CLTC-202ENST00000393043 KDM2BQ8NHM5 1336 aa14.64□□□□□ -0.07
CLTC-202ENST00000393043 ARHGAP29Q52LW3 1261 aa14.64□□□□□ -0.07
CLTC-202ENST00000393043 ZNF397Q8NF99 534 aaPredicted RBP14.64□□□□□ -0.07
CLTC-202ENST00000393043 CLIP2Q9UDT6 1046 aa14.64□□□□□ -0.07
CLTC-202ENST00000393043 PLEKHG3A1L390 1219 aa14.64□□□□□ -0.07
CLTC-202ENST00000393043 MICU3Q86XE3 530 aa14.64□□□□□ -0.07
CLTC-202ENST00000393043 FAM177A1Q8N128 213 aaPredicted RBP14.64□□□□□ -0.07
CLTC-202ENST00000393043 PA2G4Q9UQ80 394 aaKnown RBP14.64□□□□□ -0.07
CLTC-202ENST00000393043 PTPN14Q15678 1187 aa14.64□□□□□ -0.07
CLTC-202ENST00000393043 TMEM266Q2M3C6 531 aa14.64□□□□□ -0.07
CLTC-202ENST00000393043 ZSCAN23Q3MJ62 389 aa14.64□□□□□ -0.07
CLTC-202ENST00000393043 KANK3Q6NY19 840 aa14.64□□□□□ -0.07
CLTC-202ENST00000393043 INTS4Q96HW7 963 aaKnown RBP14.64□□□□□ -0.07
CLTC-202ENST00000393043 CWC15Q9P013 229 aaKnown RBP14.64□□□□□ -0.07
CLTC-202ENST00000393043 LRSAM1Q6UWE0 723 aa14.63□□□□□ -0.07
CLTC-202ENST00000393043 PCDH11XQ9BZA7 1347 aa14.63□□□□□ -0.07
CLTC-202ENST00000393043 PCDH11YQ9BZA8 1340 aa14.63□□□□□ -0.07
CLTC-202ENST00000393043 KLF18A0A0U1RQI7 1052 aa14.63□□□□□ -0.07
CLTC-202ENST00000393043 TOP1P11387 765 aaKnown RBP14.63□□□□□ -0.07
CLTC-202ENST00000393043 CHMLP26374 656 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms