RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 CMTR1Q8N1G2 835 aaKnown RBP7.81□□□□□ -1.16
SNORA40.2-201ENST00000390847 TTC16Q8NEE8 873 aa7.81□□□□□ -1.16
SNORA40.2-201ENST00000390847 SLC16A10Q8TF71 515 aa7.81□□□□□ -1.16
SNORA40.2-201ENST00000390847 PIK3R5Q8WYR1 880 aa7.81□□□□□ -1.16
SNORA40.2-201ENST00000390847 EDEM1Q92611 657 aa7.81□□□□□ -1.16
SNORA40.2-201ENST00000390847 ATXN7L1Q9ULK2 861 aaPredicted RBP7.81□□□□□ -1.16
SNORA40.2-201ENST00000390847 USP20Q9Y2K6 914 aa7.81□□□□□ -1.16
SNORA40.2-201ENST00000390847 RTCBQ9Y3I0 505 aaKnown RBP7.81□□□□□ -1.16
SNORA40.2-201ENST00000390847 TERTO14746 1132 aaKnown RBP7.8□□□□□ -1.16
SNORA40.2-201ENST00000390847 MAPK1P28482 360 aa7.8□□□□□ -1.16
SNORA40.2-201ENST00000390847 MARSP56192 900 aaKnown RBP7.8□□□□□ -1.16
SNORA40.2-201ENST00000390847 TNP2Q05952 138 aa7.8□□□□□ -1.16
SNORA40.2-201ENST00000390847 CCDC27Q2M243 656 aa7.8□□□□□ -1.16
SNORA40.2-201ENST00000390847 TMC1Q8TDI8 760 aa7.8□□□□□ -1.16
SNORA40.2-201ENST00000390847 NANOS1Q8WY41 292 aaKnown RBP7.8□□□□□ -1.16
SNORA40.2-201ENST00000390847 CCDC87Q9NVE4 849 aa7.8□□□□□ -1.16
SNORA40.2-201ENST00000390847 KCNH4Q9UQ05 1017 aa7.8□□□□□ -1.16
SNORA40.2-201ENST00000390847 EFSO43281 561 aa7.79□□□□□ -1.16
SNORA40.2-201ENST00000390847 FZD6O60353 706 aa7.79□□□□□ -1.16
SNORA40.2-201ENST00000390847 CD33P20138 364 aa7.79□□□□□ -1.16
SNORA40.2-201ENST00000390847 MZF1P28698 734 aaPredicted RBP7.79□□□□□ -1.16
SNORA40.2-201ENST00000390847 SFSWAPQ12872 951 aaKnown RBP7.79□□□□□ -1.16
SNORA40.2-201ENST00000390847 NUDT16Q96DE0 195 aaKnown RBP7.79□□□□□ -1.16
SNORA40.2-201ENST00000390847 NDFIP2Q9NV92 336 aa7.79□□□□□ -1.16
SNORA40.2-201ENST00000390847 POLIQ9UNA4 740 aa7.79□□□□□ -1.16
SNORA40.2-201ENST00000390847 PDGFAP04085 211 aa7.78□□□□□ -1.16
SNORA40.2-201ENST00000390847 FGFR3P22607 806 aa7.78□□□□□ -1.16
SNORA40.2-201ENST00000390847 CFHR5Q9BXR6 569 aa7.78□□□□□ -1.16
SNORA40.2-201ENST00000390847 STRN4Q9NRL3 753 aa7.78□□□□□ -1.16
SNORA40.2-201ENST00000390847 MARK1Q9P0L2 795 aa7.78□□□□□ -1.16
SNORA40.2-201ENST00000390847 DCTN4Q9UJW0 460 aa7.78□□□□□ -1.16
SNORA40.2-201ENST00000390847 USP5P45974 858 aa7.77□□□□□ -1.17
SNORA40.2-201ENST00000390847 LAMC2Q13753 1193 aa7.77□□□□□ -1.17
SNORA40.2-201ENST00000390847 C8orf34Q49A92 452 aa7.77□□□□□ -1.17
SNORA40.2-201ENST00000390847 FNDC3AQ9Y2H6 1198 aaKnown RBP7.77□□□□□ -1.17
SNORA40.2-201ENST00000390847 UBAP1LF5GYI3 381 aa7.76□□□□□ -1.17
SNORA40.2-201ENST00000390847 XYLBO75191 536 aa7.76□□□□□ -1.17
SNORA40.2-201ENST00000390847 RPLP1P05386 114 aaKnown RBP7.76□□□□□ -1.17
SNORA40.2-201ENST00000390847 KCNQ4P56696 695 aa7.76□□□□□ -1.17
SNORA40.2-201ENST00000390847 IRF7Q92985 503 aa7.76□□□□□ -1.17
SNORA40.2-201ENST00000390847 BMP4P12644 408 aa7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 MX2P20592 715 aa7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 GRNP28799 593 aaKnown RBP7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 MFAP1P55081 439 aaKnown RBP7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 CTBSQ01459 385 aa7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 SPEM2Q0P670 501 aa7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 KRT25Q7Z3Z0 450 aa7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 GPR161Q8N6U8 529 aaKnown RBP7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 PNMA5Q96PV4 448 aa7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 PRR12Q9ULL5 1215 aa7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 CCDC9Q9Y3X0 531 aaKnown RBP7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 ERBB4Q15303 1308 aa7.75□□□□□ -1.17
SNORA40.2-201ENST00000390847 PDE3BQ13370 1112 aa7.74□□□□□ -1.17
SNORA40.2-201ENST00000390847 CCINQ13939 588 aa7.74□□□□□ -1.17
SNORA40.2-201ENST00000390847 GRIN2CQ14957 1233 aa7.74□□□□□ -1.17
SNORA40.2-201ENST00000390847 TRIP4Q15650 581 aaPredicted RBP7.74□□□□□ -1.17
SNORA40.2-201ENST00000390847 RAB44Q7Z6P3 723 aaPredicted RBP7.74□□□□□ -1.17
SNORA40.2-201ENST00000390847 ZSCAN29Q8IWY8 852 aaPredicted RBP7.74□□□□□ -1.17
SNORA40.2-201ENST00000390847 CITED4Q96RK1 184 aa7.74□□□□□ -1.17
SNORA40.2-201ENST00000390847 KCNMB2Q9Y691 235 aa7.74□□□□□ -1.17
SNORA40.2-201ENST00000390847 A6NHS1 94 aa7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 VSIG8P0DPA2 414 aa7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 NFX1Q12986 1120 aaKnown RBP7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 NEUROD1Q13562 356 aa7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 GAS6Q14393 721 aa7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 ZNF438Q7Z4V0 828 aa7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 GJD3Q8N144 294 aa7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 SLC30A3Q99726 388 aa7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 COL25A1Q9BXS0 654 aaPredicted RBP7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 RBCK1Q9BYM8 510 aa7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 GGNBP2Q9H3C7 697 aa7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 HCN2Q9UL51 889 aa7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 NSFL1CQ9UNZ2 370 aaKnown RBP7.73□□□□□ -1.17
SNORA40.2-201ENST00000390847 SASH3O75995 380 aa7.72□□□□□ -1.17
SNORA40.2-201ENST00000390847 EHHADHQ08426 723 aa7.72□□□□□ -1.17
SNORA40.2-201ENST00000390847 FAM182BQ5T319 152 aa7.72□□□□□ -1.17
SNORA40.2-201ENST00000390847 TMC7Q7Z402 723 aa7.72□□□□□ -1.17
SNORA40.2-201ENST00000390847 BHMTQ93088 406 aa7.72□□□□□ -1.17
SNORA40.2-201ENST00000390847 GSX2Q9BZM3 304 aa7.72□□□□□ -1.17
SNORA40.2-201ENST00000390847 MBIPQ9NS73 344 aa7.72□□□□□ -1.17
SNORA40.2-201ENST00000390847 EGFRP00533 1210 aa7.71□□□□□ -1.18
SNORA40.2-201ENST00000390847 RARAP10276 462 aa7.71□□□□□ -1.18
SNORA40.2-201ENST00000390847 NFKB1P19838 968 aa7.71□□□□□ -1.18
SNORA40.2-201ENST00000390847 RNFT1Q5M7Z0 435 aa7.71□□□□□ -1.18
SNORA40.2-201ENST00000390847 PDE12Q6L8Q7 609 aaKnown RBP7.71□□□□□ -1.18
SNORA40.2-201ENST00000390847 ZNF775Q96BV0 537 aaPredicted RBP7.71□□□□□ -1.18
SNORA40.2-201ENST00000390847 DMRTB1Q96MA1 342 aa7.71□□□□□ -1.18
SNORA40.2-201ENST00000390847 ASB16Q96NS5 453 aa7.71□□□□□ -1.18
SNORA40.2-201ENST00000390847 C11orf16Q9NQ32 467 aa7.71□□□□□ -1.18
SNORA40.2-201ENST00000390847 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.71□□□□□ -1.18
SNORA40.2-201ENST00000390847 ANKRD33BA6NCL7 494 aa7.7□□□□□ -1.18
SNORA40.2-201ENST00000390847 WFS1O76024 890 aa7.7□□□□□ -1.18
SNORA40.2-201ENST00000390847 TARSP26639 723 aaKnown RBP7.7□□□□□ -1.18
SNORA40.2-201ENST00000390847 TTC39BQ5VTQ0 682 aaPredicted RBP7.7□□□□□ -1.18
SNORA40.2-201ENST00000390847 NLRP13Q86W25 1043 aa7.7□□□□□ -1.18
SNORA40.2-201ENST00000390847 CNTNAP3BQ96NU0 1288 aa7.7□□□□□ -1.18
SNORA40.2-201ENST00000390847 CNTNAP3Q9BZ76 1288 aa7.7□□□□□ -1.18
SNORA40.2-201ENST00000390847 ELP3Q9H9T3 547 aa7.7□□□□□ -1.18
SNORA40.2-201ENST00000390847 C2CD2LO14523 706 aa7.69□□□□□ -1.18
SNORA40.2-201ENST00000390847 MAP2K3P46734 347 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms