RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 BOLA2Q9H3K6 86 aa20.84■□□□□ 0.93
PDX1-201ENST00000381033 TTC41PQ6P2S7 1318 aa20.84■□□□□ 0.93
PDX1-201ENST00000381033 USP42Q9H9J4 1324 aaKnown RBP20.84■□□□□ 0.93
PDX1-201ENST00000381033 TRAK2O60296 914 aa20.84■□□□□ 0.93
PDX1-201ENST00000381033 PTPN12Q05209 780 aaKnown RBP20.84■□□□□ 0.93
PDX1-201ENST00000381033 LARP6Q9BRS8 491 aaKnown RBP20.84■□□□□ 0.93
PDX1-201ENST00000381033 ARFGEF2Q9Y6D5 1785 aa20.84■□□□□ 0.93
PDX1-201ENST00000381033 AFDNP55196 1824 aaKnown RBP20.83■□□□□ 0.93
PDX1-201ENST00000381033 RFX5P48382 616 aaPredicted RBP20.83■□□□□ 0.93
PDX1-201ENST00000381033 RASEFQ8IZ41 740 aa20.83■□□□□ 0.93
PDX1-201ENST00000381033 CIZ1Q9ULV3 898 aaPredicted RBP20.83■□□□□ 0.93
PDX1-201ENST00000381033 CCDC9Q9Y3X0 531 aaKnown RBP20.83■□□□□ 0.93
PDX1-201ENST00000381033 KCPQ6ZWJ8 1503 aa20.83■□□□□ 0.93
PDX1-201ENST00000381033 CASP7P55210 303 aa20.83■□□□□ 0.92
PDX1-201ENST00000381033 ERC1Q8IUD2 1116 aa20.83■□□□□ 0.92
PDX1-201ENST00000381033 PIGBQ92521 554 aa20.82■□□□□ 0.92
PDX1-201ENST00000381033 LSG1Q9H089 658 aaKnown RBP20.82■□□□□ 0.92
PDX1-201ENST00000381033 HDAC5Q9UQL6 1122 aa20.82■□□□□ 0.92
PDX1-201ENST00000381033 CHMP3Q9Y3E7 222 aa20.82■□□□□ 0.92
PDX1-201ENST00000381033 PTH1RQ03431 593 aa20.82■□□□□ 0.92
PDX1-201ENST00000381033 LMBR1LQ6UX01 489 aa20.82■□□□□ 0.92
PDX1-201ENST00000381033 TMX3Q96JJ7 454 aa20.82■□□□□ 0.92
PDX1-201ENST00000381033 DTNBO60941 627 aa20.81■□□□□ 0.92
PDX1-201ENST00000381033 CHGBP05060 677 aa20.81■□□□□ 0.92
PDX1-201ENST00000381033 TFCP2Q12800 502 aa20.81■□□□□ 0.92
PDX1-201ENST00000381033 TMOD3Q9NYL9 352 aa20.81■□□□□ 0.92
PDX1-201ENST00000381033 NHSL1Q5SYE7 1610 aa20.81■□□□□ 0.92
PDX1-201ENST00000381033 CPA1P15085 419 aa20.81■□□□□ 0.92
PDX1-201ENST00000381033 HSPA4P34932 840 aa20.81■□□□□ 0.92
PDX1-201ENST00000381033 FOXD4L5Q5VV16 416 aaPredicted RBP20.81■□□□□ 0.92
PDX1-201ENST00000381033 FOXD4L4Q8WXT5 416 aaPredicted RBP20.81■□□□□ 0.92
PDX1-201ENST00000381033 FAM227BQ96M60 508 aa20.81■□□□□ 0.92
PDX1-201ENST00000381033 TOGARAM1Q9Y4F4 1720 aa20.8■□□□□ 0.92
PDX1-201ENST00000381033 MCCP23508 829 aa20.8■□□□□ 0.92
PDX1-201ENST00000381033 DNAJC10Q8IXB1 793 aa20.8■□□□□ 0.92
PDX1-201ENST00000381033 PLEKHG2Q9H7P9 1386 aa20.8■□□□□ 0.92
PDX1-201ENST00000381033 DIAPH3Q9NSV4 1193 aa20.79■□□□□ 0.92
PDX1-201ENST00000381033 FAM43AQ8N2R8 423 aa20.79■□□□□ 0.92
PDX1-201ENST00000381033 RAD50Q92878 1312 aa20.79■□□□□ 0.92
PDX1-201ENST00000381033 FOXO4P98177 505 aa20.78■□□□□ 0.92
PDX1-201ENST00000381033 COL9A3Q14050 684 aaPredicted RBP20.78■□□□□ 0.92
PDX1-201ENST00000381033 RABL6Q3YEC7 729 aaPredicted RBP20.78■□□□□ 0.92
PDX1-201ENST00000381033 DBNLQ9UJU6 430 aaKnown RBP20.78■□□□□ 0.92
PDX1-201ENST00000381033 LAMB4A4D0S4 1761 aa20.78■□□□□ 0.92
PDX1-201ENST00000381033 UBR2Q8IWV8 1755 aa20.78■□□□□ 0.92
PDX1-201ENST00000381033 SYTL4Q96C24 671 aaPredicted RBP20.78■□□□□ 0.92
PDX1-201ENST00000381033 ZNF594Q96JF6 807 aaPredicted RBP20.78■□□□□ 0.92
PDX1-201ENST00000381033 COPRSQ9NQ92 184 aa20.78■□□□□ 0.92
PDX1-201ENST00000381033 ZDHHC9Q9Y397 364 aa20.78■□□□□ 0.92
PDX1-201ENST00000381033 SNX14Q9Y5W7 946 aa20.78■□□□□ 0.92
PDX1-201ENST00000381033 GPATCH3Q96I76 525 aa20.77■□□□□ 0.92
PDX1-201ENST00000381033 CCDC85AQ96PX6 553 aaPredicted RBP20.77■□□□□ 0.92
PDX1-201ENST00000381033 ATG3Q9NT62 314 aa20.77■□□□□ 0.92
PDX1-201ENST00000381033 H7C1W4 665 aa20.76■□□□□ 0.91
PDX1-201ENST00000381033 ADAMTS2O95450 1211 aa20.76■□□□□ 0.91
PDX1-201ENST00000381033 FBXO3Q9UK99 471 aa20.76■□□□□ 0.91
PDX1-201ENST00000381033 ANAPC15P60006 121 aa20.76■□□□□ 0.91
PDX1-201ENST00000381033 SLC4A9Q96Q91 983 aa20.76■□□□□ 0.91
PDX1-201ENST00000381033 NMIQ13287 307 aaPredicted RBP20.75■□□□□ 0.91
PDX1-201ENST00000381033 SYNE4Q8N205 404 aa20.75■□□□□ 0.91
PDX1-201ENST00000381033 EVI5LQ96CN4 794 aa20.75■□□□□ 0.91
PDX1-201ENST00000381033 DBNDD2Q9BQY9 259 aa20.75■□□□□ 0.91
PDX1-201ENST00000381033 CWC25Q9NXE8 425 aaPredicted RBP20.75■□□□□ 0.91
PDX1-201ENST00000381033 A0A0D9SFI3 127 aa20.75■□□□□ 0.91
PDX1-201ENST00000381033 BAG4O95429 457 aaKnown RBP20.75■□□□□ 0.91
PDX1-201ENST00000381033 ADCK5Q3MIX3 580 aa20.75■□□□□ 0.91
PDX1-201ENST00000381033 TNNI3KQ59H18 835 aa20.75■□□□□ 0.91
PDX1-201ENST00000381033 KIAA1211Q6ZU35 1233 aa20.75■□□□□ 0.91
PDX1-201ENST00000381033 TEX2Q8IWB9 1127 aa20.75■□□□□ 0.91
PDX1-201ENST00000381033 GBP4Q96PP9 640 aa20.75■□□□□ 0.91
PDX1-201ENST00000381033 FPGT-TNNI3KV9GXZ4 949 aa20.75■□□□□ 0.91
PDX1-201ENST00000381033 DDX11L8A8MPP1 907 aa20.74■□□□□ 0.91
PDX1-201ENST00000381033 HSP90B1P14625 803 aaKnown RBP20.74■□□□□ 0.91
PDX1-201ENST00000381033 TNS2Q63HR2 1409 aa20.74■□□□□ 0.91
PDX1-201ENST00000381033 CYP2E1P05181 493 aaPredicted RBP20.74■□□□□ 0.91
PDX1-201ENST00000381033 CDK11BP21127 795 aaKnown RBP20.74■□□□□ 0.91
PDX1-201ENST00000381033 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.74■□□□□ 0.91
PDX1-201ENST00000381033 PRPF40BQ6NWY9 871 aaKnown RBP20.73■□□□□ 0.91
PDX1-201ENST00000381033 LRRC24Q50LG9 513 aa20.73■□□□□ 0.91
PDX1-201ENST00000381033 FSD1Q9BTV5 496 aa20.73■□□□□ 0.91
PDX1-201ENST00000381033 ROBO1Q9Y6N7 1651 aa20.73■□□□□ 0.91
PDX1-201ENST00000381033 PAPPAQ13219 1627 aa20.72■□□□□ 0.91
PDX1-201ENST00000381033 ERBB4Q15303 1308 aa20.72■□□□□ 0.91
PDX1-201ENST00000381033 A0A0G2JS52 829 aa20.72■□□□□ 0.91
PDX1-201ENST00000381033 TIMM10P62072 90 aa20.72■□□□□ 0.91
PDX1-201ENST00000381033 SLFNL1Q499Z3 407 aa20.72■□□□□ 0.91
PDX1-201ENST00000381033 MCTP1Q6DN14 999 aa20.72■□□□□ 0.91
PDX1-201ENST00000381033 PUS3Q9BZE2 481 aaKnown RBP20.72■□□□□ 0.91
PDX1-201ENST00000381033 TAF6LQ9Y6J9 622 aa20.72■□□□□ 0.91
PDX1-201ENST00000381033 ATG9AQ7Z3C6 839 aa20.71■□□□□ 0.91
PDX1-201ENST00000381033 ZNF589Q86UQ0 364 aaPredicted RBP20.71■□□□□ 0.91
PDX1-201ENST00000381033 SECISBP2LQ93073 1101 aaKnown RBP20.71■□□□□ 0.91
PDX1-201ENST00000381033 FAM89AQ96GI7 184 aa20.71■□□□□ 0.91
PDX1-201ENST00000381033 DNAJC2Q99543 621 aaKnown RBP20.71■□□□□ 0.91
PDX1-201ENST00000381033 NUP188Q5SRE5 1749 aa20.71■□□□□ 0.91
PDX1-201ENST00000381033 CHRM1P11229 460 aaPredicted RBP20.7■□□□□ 0.9
PDX1-201ENST00000381033 HLFQ16534 295 aa20.7■□□□□ 0.9
PDX1-201ENST00000381033 CASTP20810 708 aaKnown RBP20.7■□□□□ 0.9
PDX1-201ENST00000381033 FOXD4L6Q3SYB3 417 aaPredicted RBP20.7■□□□□ 0.9
PDX1-201ENST00000381033 FOXD4L3Q6VB84 417 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms