RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 CCDC146Q8IYE0 955 aa17.89■□□□□ 0.45
PRPF18-202ENST00000378572 SYNE4Q8N205 404 aa17.89■□□□□ 0.45
PRPF18-202ENST00000378572 NECTIN2Q92692 538 aa17.89■□□□□ 0.45
PRPF18-202ENST00000378572 SUSD4Q5VX71 490 aa17.88■□□□□ 0.45
PRPF18-202ENST00000378572 IBTKQ9P2D0 1353 aaPredicted RBP17.87■□□□□ 0.45
PRPF18-202ENST00000378572 PPP1R42Q7Z4L9 355 aa17.87■□□□□ 0.45
PRPF18-202ENST00000378572 JDP2Q8WYK2 163 aa17.87■□□□□ 0.45
PRPF18-202ENST00000378572 RBM17Q96I25 401 aaKnown RBP17.87■□□□□ 0.45
PRPF18-202ENST00000378572 CLEC11AQ9Y240 323 aa17.87■□□□□ 0.45
PRPF18-202ENST00000378572 LAS1LQ9Y4W2 734 aaKnown RBP17.87■□□□□ 0.45
PRPF18-202ENST00000378572 ANXA1P04083 346 aa17.86■□□□□ 0.45
PRPF18-202ENST00000378572 TMPOP42166 694 aaKnown RBP17.86■□□□□ 0.45
PRPF18-202ENST00000378572 TMX4Q9H1E5 349 aaPredicted RBP17.86■□□□□ 0.45
PRPF18-202ENST00000378572 ADAMTS8Q9UP79 889 aa17.86■□□□□ 0.45
PRPF18-202ENST00000378572 PPEF1O14829 653 aaPredicted RBP17.86■□□□□ 0.45
PRPF18-202ENST00000378572 CRY2Q49AN0 593 aa17.86■□□□□ 0.45
PRPF18-202ENST00000378572 GIGYF2Q6Y7W6 1299 aaKnown RBP17.86■□□□□ 0.45
PRPF18-202ENST00000378572 LDHDQ86WU2 507 aa17.86■□□□□ 0.45
PRPF18-202ENST00000378572 TAF1DQ9H5J8 278 aaPredicted RBP17.86■□□□□ 0.45
PRPF18-202ENST00000378572 HACL1Q9UJ83 578 aa17.86■□□□□ 0.45
PRPF18-202ENST00000378572 SCN4AP35499 1836 aa17.85■□□□□ 0.45
PRPF18-202ENST00000378572 AIMP1Q12904 312 aaKnown RBP17.85■□□□□ 0.45
PRPF18-202ENST00000378572 PARP10Q53GL7 1025 aa17.85■□□□□ 0.45
PRPF18-202ENST00000378572 L3MBTL3Q96JM7 780 aaPredicted RBP17.85■□□□□ 0.45
PRPF18-202ENST00000378572 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
PRPF18-202ENST00000378572 NTSR2O95665 410 aa17.84■□□□□ 0.45
PRPF18-202ENST00000378572 PROSER3Q2NL68 480 aa17.84■□□□□ 0.45
PRPF18-202ENST00000378572 CC2D2BQ6DHV5 1058 aa17.84■□□□□ 0.45
PRPF18-202ENST00000378572 ZNF34Q8IZ26 560 aa17.84■□□□□ 0.45
PRPF18-202ENST00000378572 MKRN1Q9UHC7 482 aaKnown RBP17.84■□□□□ 0.45
PRPF18-202ENST00000378572 GJA3Q9Y6H8 435 aa17.84■□□□□ 0.45
PRPF18-202ENST00000378572 RIC1Q4ADV7 1423 aa17.84■□□□□ 0.45
PRPF18-202ENST00000378572 HSPA1AP0DMV8 641 aaKnown RBP17.84■□□□□ 0.45
PRPF18-202ENST00000378572 HSPA1BP0DMV9 641 aaKnown RBP17.84■□□□□ 0.45
PRPF18-202ENST00000378572 EIF6P56537 245 aaKnown RBP17.84■□□□□ 0.45
PRPF18-202ENST00000378572 HNRNPUQ00839 825 aaKnown RBP eCLIP17.84■□□□□ 0.45
PRPF18-202ENST00000378572 PSMD1Q99460 953 aa17.84■□□□□ 0.45
PRPF18-202ENST00000378572 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
PRPF18-202ENST00000378572 EPHX2P34913 555 aa17.83■□□□□ 0.44
PRPF18-202ENST00000378572 LARGE2Q8N3Y3 721 aa17.83■□□□□ 0.44
PRPF18-202ENST00000378572 NLRP3Q96P20 1036 aa17.83■□□□□ 0.44
PRPF18-202ENST00000378572 CREBZFQ9NS37 354 aa17.83■□□□□ 0.44
PRPF18-202ENST00000378572 BABAM1Q9NWV8 329 aa17.82■□□□□ 0.44
PRPF18-202ENST00000378572 LMOD1P29536 600 aaPredicted RBP17.81■□□□□ 0.44
PRPF18-202ENST00000378572 HOXA10P31260 410 aaPredicted RBP17.81■□□□□ 0.44
PRPF18-202ENST00000378572 COL13A1Q5TAT6 717 aaPredicted RBP17.81■□□□□ 0.44
PRPF18-202ENST00000378572 C3orf67Q6ZVT6 689 aa17.81■□□□□ 0.44
PRPF18-202ENST00000378572 XAGE3Q8WTP9 111 aa17.81■□□□□ 0.44
PRPF18-202ENST00000378572 FZD9O00144 591 aa17.81■□□□□ 0.44
PRPF18-202ENST00000378572 HSP90AB3PQ58FF7 597 aa17.81■□□□□ 0.44
PRPF18-202ENST00000378572 COPS6Q7L5N1 327 aa17.81■□□□□ 0.44
PRPF18-202ENST00000378572 GPC2Q8N158 579 aa17.81■□□□□ 0.44
PRPF18-202ENST00000378572 CRAMP1Q96RY5 1269 aa17.81■□□□□ 0.44
PRPF18-202ENST00000378572 ZBED9Q6R2W3 1325 aa17.8■□□□□ 0.44
PRPF18-202ENST00000378572 ANKRD36CQ5JPF3 1778 aa17.8■□□□□ 0.44
PRPF18-202ENST00000378572 PDIA6Q15084 440 aa17.8■□□□□ 0.44
PRPF18-202ENST00000378572 SLC51AQ86UW1 340 aa17.8■□□□□ 0.44
PRPF18-202ENST00000378572 PNMA8AQ86V59 439 aaPredicted RBP17.8■□□□□ 0.44
PRPF18-202ENST00000378572 NIM1KQ8IY84 436 aa17.8■□□□□ 0.44
PRPF18-202ENST00000378572 RUNDC1Q96C34 613 aa17.8■□□□□ 0.44
PRPF18-202ENST00000378572 PPIP5K2O43314 1243 aa17.79■□□□□ 0.44
PRPF18-202ENST00000378572 CAPN15O75808 1086 aa17.79■□□□□ 0.44
PRPF18-202ENST00000378572 CENPBP07199 599 aaPredicted RBP17.79■□□□□ 0.44
PRPF18-202ENST00000378572 KRT24Q2M2I5 525 aa17.79■□□□□ 0.44
PRPF18-202ENST00000378572 GRIPAP1Q4V328 841 aa17.79■□□□□ 0.44
PRPF18-202ENST00000378572 TNS4Q8IZW8 715 aa17.79■□□□□ 0.44
PRPF18-202ENST00000378572 ZNF428Q96B54 188 aa17.79■□□□□ 0.44
PRPF18-202ENST00000378572 SNED1Q8TER0 1413 aa17.78■□□□□ 0.44
PRPF18-202ENST00000378572 HCLS1P14317 486 aaPredicted RBP17.78■□□□□ 0.44
PRPF18-202ENST00000378572 HDGFL1Q5TGJ6 251 aa17.78■□□□□ 0.44
PRPF18-202ENST00000378572 MAP1SQ66K74 1059 aaPredicted RBP17.78■□□□□ 0.44
PRPF18-202ENST00000378572 LRP10Q7Z4F1 713 aa17.78■□□□□ 0.44
PRPF18-202ENST00000378572 CHPF2Q9P2E5 772 aa17.78■□□□□ 0.44
PRPF18-202ENST00000378572 TRMT112Q9UI30 125 aaKnown RBP17.78■□□□□ 0.44
PRPF18-202ENST00000378572 ABCC4O15439 1325 aa17.77■□□□□ 0.44
PRPF18-202ENST00000378572 DDX21Q9NR30 783 aaKnown RBP eCLIP17.77■□□□□ 0.44
PRPF18-202ENST00000378572 COL4A5P29400 1685 aa17.77■□□□□ 0.43
PRPF18-202ENST00000378572 PASKQ96RG2 1323 aa17.77■□□□□ 0.43
PRPF18-202ENST00000378572 TMEM88BA6NKF7 163 aa17.76■□□□□ 0.43
PRPF18-202ENST00000378572 AOC3Q16853 763 aa17.76■□□□□ 0.43
PRPF18-202ENST00000378572 NLRP10Q86W26 655 aa17.76■□□□□ 0.43
PRPF18-202ENST00000378572 PCNTO95613 3336 aa17.76■□□□□ 0.43
PRPF18-202ENST00000378572 DDX46Q7L014 1031 aaKnown RBP17.75■□□□□ 0.43
PRPF18-202ENST00000378572 ATP6V0A2Q9Y487 856 aa17.75■□□□□ 0.43
PRPF18-202ENST00000378572 SH3TC1Q8TE82 1336 aa17.75■□□□□ 0.43
PRPF18-202ENST00000378572 CNTNAP1P78357 1384 aa17.75■□□□□ 0.43
PRPF18-202ENST00000378572 CHL1O00533 1208 aa17.75■□□□□ 0.43
PRPF18-202ENST00000378572 TCIRG1Q13488 830 aa17.75■□□□□ 0.43
PRPF18-202ENST00000378572 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
PRPF18-202ENST00000378572 DPP8Q6V1X1 898 aaPredicted RBP17.75■□□□□ 0.43
PRPF18-202ENST00000378572 CNTROBQ8N137 903 aa17.75■□□□□ 0.43
PRPF18-202ENST00000378572 SUPT20HQ8NEM7 779 aa17.75■□□□□ 0.43
PRPF18-202ENST00000378572 TRIM35Q9UPQ4 493 aa17.75■□□□□ 0.43
PRPF18-202ENST00000378572 LAMB2P55268 1798 aa17.74■□□□□ 0.43
PRPF18-202ENST00000378572 SLC10A5Q5PT55 438 aa17.74■□□□□ 0.43
PRPF18-202ENST00000378572 ADAMTSL1Q8N6G6 1762 aa17.73■□□□□ 0.43
PRPF18-202ENST00000378572 AIDAQ96BJ3 306 aa17.73■□□□□ 0.43
PRPF18-202ENST00000378572 ABT1Q9ULW3 272 aaKnown RBP17.73■□□□□ 0.43
PRPF18-202ENST00000378572 ITGBL1O95965 494 aaPredicted RBP17.72■□□□□ 0.43
PRPF18-202ENST00000378572 EPS15P42566 896 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms