RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 DDX21Q9NR30 783 aaKnown RBP eCLIP23.32■■□□□ 1.32
COMMD6-202ENST00000377612 GTF2E1P29083 439 aaPredicted RBP23.31■■□□□ 1.32
COMMD6-202ENST00000377612 CCDC93Q567U6 631 aa23.31■■□□□ 1.32
COMMD6-202ENST00000377612 RBM46Q8TBY0 533 aaKnown RBP23.31■■□□□ 1.32
COMMD6-202ENST00000377612 ADAMTSL1Q8N6G6 1762 aa23.3■■□□□ 1.32
COMMD6-202ENST00000377612 POTECB2RU33 542 aa23.3■■□□□ 1.32
COMMD6-202ENST00000377612 AIMP1Q12904 312 aaKnown RBP23.3■■□□□ 1.32
COMMD6-202ENST00000377612 SOGA3Q5TF21 947 aa23.3■■□□□ 1.32
COMMD6-202ENST00000377612 HDGFL1Q5TGJ6 251 aa23.3■■□□□ 1.32
COMMD6-202ENST00000377612 CACNA1FO60840 1977 aa23.3■■□□□ 1.32
COMMD6-202ENST00000377612 HOXB7P09629 217 aa23.29■■□□□ 1.32
COMMD6-202ENST00000377612 MYH3P11055 1940 aa23.29■■□□□ 1.32
COMMD6-202ENST00000377612 LTBP1Q14766 1721 aa23.28■■□□□ 1.32
COMMD6-202ENST00000377612 PARP10Q53GL7 1025 aa23.28■■□□□ 1.32
COMMD6-202ENST00000377612 SPEF2Q9C093 1822 aa23.27■■□□□ 1.32
COMMD6-202ENST00000377612 HOXA10P31260 410 aaPredicted RBP23.27■■□□□ 1.32
COMMD6-202ENST00000377612 FKBP4Q02790 459 aaKnown RBP eCLIP23.27■■□□□ 1.32
COMMD6-202ENST00000377612 DUSP27Q5VZP5 1158 aa23.27■■□□□ 1.32
COMMD6-202ENST00000377612 IFT57Q9NWB7 429 aa23.27■■□□□ 1.32
COMMD6-202ENST00000377612 ZNF316A6NFI3 1004 aaPredicted RBP23.26■■□□□ 1.31
COMMD6-202ENST00000377612 PPP1R42Q7Z4L9 355 aa23.26■■□□□ 1.31
COMMD6-202ENST00000377612 NLRP10Q86W26 655 aa23.26■■□□□ 1.31
COMMD6-202ENST00000377612 ZNF277Q9NRM2 450 aaPredicted RBP23.26■■□□□ 1.31
COMMD6-202ENST00000377612 DUOX1Q9NRD9 1551 aa23.26■■□□□ 1.31
COMMD6-202ENST00000377612 C16orf71Q8IYS4 520 aaPredicted RBP23.25■■□□□ 1.31
COMMD6-202ENST00000377612 SYNE4Q8N205 404 aa23.25■■□□□ 1.31
COMMD6-202ENST00000377612 ALDH1B1P30837 517 aa23.24■■□□□ 1.31
COMMD6-202ENST00000377612 ZNF428Q96B54 188 aa23.24■■□□□ 1.31
COMMD6-202ENST00000377612 UTP14AQ9BVJ6 771 aaKnown RBP23.24■■□□□ 1.31
COMMD6-202ENST00000377612 ZNF541Q9H0D2 1346 aa23.24■■□□□ 1.31
COMMD6-202ENST00000377612 TCIRG1Q13488 830 aa23.23■■□□□ 1.31
COMMD6-202ENST00000377612 RPGRQ92834 1020 aaKnown RBP23.23■■□□□ 1.31
COMMD6-202ENST00000377612 DDNO94850 711 aaPredicted RBP23.22■■□□□ 1.31
COMMD6-202ENST00000377612 GNAI1P63096 354 aa23.22■■□□□ 1.31
COMMD6-202ENST00000377612 HSP90AB3PQ58FF7 597 aa23.22■■□□□ 1.31
COMMD6-202ENST00000377612 SLC10A5Q5PT55 438 aa23.22■■□□□ 1.31
COMMD6-202ENST00000377612 DBF4Q9UBU7 674 aaPredicted RBP23.22■■□□□ 1.31
COMMD6-202ENST00000377612 ABCC4O15439 1325 aa23.22■■□□□ 1.31
COMMD6-202ENST00000377612 RNF123Q5XPI4 1314 aa23.22■■□□□ 1.31
COMMD6-202ENST00000377612 VEGFAP15692 232 aaPredicted RBP23.21■■□□□ 1.31
COMMD6-202ENST00000377612 HTRA3P83110 453 aa23.21■■□□□ 1.31
COMMD6-202ENST00000377612 FSTL1Q12841 308 aa23.21■■□□□ 1.31
COMMD6-202ENST00000377612 C8orf58Q8NAV2 365 aa23.21■■□□□ 1.31
COMMD6-202ENST00000377612 PLBD2Q8NHP8 589 aa23.21■■□□□ 1.31
COMMD6-202ENST00000377612 CRAMP1Q96RY5 1269 aa23.21■■□□□ 1.31
COMMD6-202ENST00000377612 ELL2O00472 640 aaPredicted RBP23.2■■□□□ 1.3
COMMD6-202ENST00000377612 HCLS1P14317 486 aaPredicted RBP23.2■■□□□ 1.3
COMMD6-202ENST00000377612 APLP1P51693 650 aa23.2■■□□□ 1.3
COMMD6-202ENST00000377612 RTKN2Q8IZC4 609 aa23.2■■□□□ 1.3
COMMD6-202ENST00000377612 ISCA1Q9BUE6 129 aa23.2■■□□□ 1.3
COMMD6-202ENST00000377612 PPEF1O14829 653 aaPredicted RBP23.19■■□□□ 1.3
COMMD6-202ENST00000377612 IARSP41252 1262 aaKnown RBP23.19■■□□□ 1.3
COMMD6-202ENST00000377612 RBM17Q96I25 401 aaKnown RBP23.19■■□□□ 1.3
COMMD6-202ENST00000377612 CALD1Q05682 793 aaKnown RBP23.18■■□□□ 1.3
COMMD6-202ENST00000377612 TSPYL6Q8N831 410 aa23.18■■□□□ 1.3
COMMD6-202ENST00000377612 SMC1BQ8NDV3 1235 aa23.18■■□□□ 1.3
COMMD6-202ENST00000377612 TSR2Q969E8 191 aaKnown RBP23.18■■□□□ 1.3
COMMD6-202ENST00000377612 NLRP3Q96P20 1036 aa23.18■■□□□ 1.3
COMMD6-202ENST00000377612 PSMD1Q99460 953 aa23.18■■□□□ 1.3
COMMD6-202ENST00000377612 PHAXQ9H814 394 aaKnown RBP23.18■■□□□ 1.3
COMMD6-202ENST00000377612 MRS2Q9HD23 443 aa23.18■■□□□ 1.3
COMMD6-202ENST00000377612 SH3TC1Q8TE82 1336 aa23.17■■□□□ 1.3
COMMD6-202ENST00000377612 ATP5J2-PTCD1G3V325 749 aa23.17■■□□□ 1.3
COMMD6-202ENST00000377612 TCERG1O14776 1098 aaKnown RBP23.17■■□□□ 1.3
COMMD6-202ENST00000377612 POTEIP0CG38 1075 aa23.17■■□□□ 1.3
COMMD6-202ENST00000377612 POTEJP0CG39 1038 aa23.17■■□□□ 1.3
COMMD6-202ENST00000377612 DPY19L2Q6NUT2 758 aa23.17■■□□□ 1.3
COMMD6-202ENST00000377612 ANKRD13DQ6ZTN6 518 aa23.17■■□□□ 1.3
COMMD6-202ENST00000377612 HYPKQ9NX55 129 aa23.17■■□□□ 1.3
COMMD6-202ENST00000377612 TRMT112Q9UI30 125 aaKnown RBP23.17■■□□□ 1.3
COMMD6-202ENST00000377612 CCDC27Q2M243 656 aa23.15■■□□□ 1.3
COMMD6-202ENST00000377612 WWC1Q8IX03 1113 aa23.15■■□□□ 1.3
COMMD6-202ENST00000377612 DNAJC5GQ8N7S2 189 aa23.15■■□□□ 1.3
COMMD6-202ENST00000377612 L3MBTL3Q96JM7 780 aaPredicted RBP23.15■■□□□ 1.3
COMMD6-202ENST00000377612 PSME4Q14997 1843 aa23.15■■□□□ 1.3
COMMD6-202ENST00000377612 FZD9O00144 591 aa23.14■■□□□ 1.29
COMMD6-202ENST00000377612 CC2D2BQ6DHV5 1058 aa23.14■■□□□ 1.29
COMMD6-202ENST00000377612 SCN9AQ15858 1988 aa23.13■■□□□ 1.29
COMMD6-202ENST00000377612 ANP32CO43423 234 aa23.13■■□□□ 1.29
COMMD6-202ENST00000377612 ATP6V0A2Q9Y487 856 aa23.13■■□□□ 1.29
COMMD6-202ENST00000377612 A0A1B0GUL6 1792 aa23.12■■□□□ 1.29
COMMD6-202ENST00000377612 FAM89AQ96GI7 184 aa23.12■■□□□ 1.29
COMMD6-202ENST00000377612 TRPM7Q96QT4 1865 aa23.12■■□□□ 1.29
COMMD6-202ENST00000377612 ZNF646O15015 1829 aaPredicted RBP23.1■■□□□ 1.29
COMMD6-202ENST00000377612 RTL5Q5HYW3 569 aaPredicted RBP23.1■■□□□ 1.29
COMMD6-202ENST00000377612 PCNTO95613 3336 aa23.09■■□□□ 1.29
COMMD6-202ENST00000377612 GOLGA2Q08379 1002 aa23.09■■□□□ 1.29
COMMD6-202ENST00000377612 TRIM28Q13263 835 aaKnown RBP23.09■■□□□ 1.29
COMMD6-202ENST00000377612 GRAPQ13588 217 aa23.09■■□□□ 1.29
COMMD6-202ENST00000377612 GRAPLQ8TC17 118 aaPredicted RBP23.09■■□□□ 1.29
COMMD6-202ENST00000377612 TAF1DQ9H5J8 278 aaPredicted RBP23.09■■□□□ 1.29
COMMD6-202ENST00000377612 RIC3Q7Z5B4 369 aa23.08■■□□□ 1.29
COMMD6-202ENST00000377612 MYD88Q99836 296 aa23.08■■□□□ 1.29
COMMD6-202ENST00000377612 IL16Q14005 1332 aa23.08■■□□□ 1.28
COMMD6-202ENST00000377612 FANCIQ9NVI1 1328 aa23.08■■□□□ 1.28
COMMD6-202ENST00000377612 AOC3Q16853 763 aa23.07■■□□□ 1.28
COMMD6-202ENST00000377612 DDX46Q7L014 1031 aaKnown RBP23.07■■□□□ 1.28
COMMD6-202ENST00000377612 LARGE2Q8N3Y3 721 aa23.07■■□□□ 1.28
COMMD6-202ENST00000377612 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
COMMD6-202ENST00000377612 NCBP3Q53F19 620 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms