RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 F13A1P00488 732 aa19.47■□□□□ 0.71
TRIM27-202ENST00000377199 TCHHQ07283 1943 aa19.47■□□□□ 0.71
TRIM27-202ENST00000377199 ERBB3P21860 1342 aa19.47■□□□□ 0.71
TRIM27-202ENST00000377199 UBE3BQ7Z3V4 1068 aa19.47■□□□□ 0.71
TRIM27-202ENST00000377199 DNAJC2Q99543 621 aaKnown RBP19.46■□□□□ 0.71
TRIM27-202ENST00000377199 R3HCC1Q9Y3T6 440 aaKnown RBP19.46■□□□□ 0.71
TRIM27-202ENST00000377199 HCLS1P14317 486 aaPredicted RBP19.46■□□□□ 0.71
TRIM27-202ENST00000377199 TTC5Q8N0Z6 440 aa19.46■□□□□ 0.71
TRIM27-202ENST00000377199 ZNF589Q86UQ0 364 aaPredicted RBP19.45■□□□□ 0.7
TRIM27-202ENST00000377199 PDLIM2Q96JY6 352 aa19.45■□□□□ 0.7
TRIM27-202ENST00000377199 USP25Q9UHP3 1055 aa19.45■□□□□ 0.7
TRIM27-202ENST00000377199 TPCN1Q9ULQ1 816 aa19.45■□□□□ 0.7
TRIM27-202ENST00000377199 MED1Q15648 1581 aaPredicted RBP19.45■□□□□ 0.7
TRIM27-202ENST00000377199 NEURL1BA8MQ27 555 aa19.45■□□□□ 0.7
TRIM27-202ENST00000377199 GIMAP6Q6P9H5 292 aa19.45■□□□□ 0.7
TRIM27-202ENST00000377199 ZNF830Q96NB3 372 aaPredicted RBP19.45■□□□□ 0.7
TRIM27-202ENST00000377199 LARP1Q6PKG0 1096 aaKnown RBP19.44■□□□□ 0.7
TRIM27-202ENST00000377199 SLC52A2Q9HAB3 445 aa19.44■□□□□ 0.7
TRIM27-202ENST00000377199 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.44■□□□□ 0.7
TRIM27-202ENST00000377199 USP42Q9H9J4 1324 aaKnown RBP19.44■□□□□ 0.7
TRIM27-202ENST00000377199 TATP17735 454 aaPredicted RBP19.44■□□□□ 0.7
TRIM27-202ENST00000377199 NECTIN1Q15223 517 aa19.44■□□□□ 0.7
TRIM27-202ENST00000377199 HDAC5Q9UQL6 1122 aa19.44■□□□□ 0.7
TRIM27-202ENST00000377199 KDM3BQ7LBC6 1761 aa19.44■□□□□ 0.7
TRIM27-202ENST00000377199 GCKRQ14397 625 aa19.44■□□□□ 0.7
TRIM27-202ENST00000377199 NPHP3Q7Z494 1330 aa19.43■□□□□ 0.7
TRIM27-202ENST00000377199 SLC27A2O14975 620 aa19.43■□□□□ 0.7
TRIM27-202ENST00000377199 PHF14O94880 888 aa19.43■□□□□ 0.7
TRIM27-202ENST00000377199 VPS53Q5VIR6 699 aa19.43■□□□□ 0.7
TRIM27-202ENST00000377199 CCDC129Q6ZRS4 1044 aa19.43■□□□□ 0.7
TRIM27-202ENST00000377199 NOL7Q9UMY1 257 aaKnown RBP19.43■□□□□ 0.7
TRIM27-202ENST00000377199 ST3GAL1Q11201 340 aa19.43■□□□□ 0.7
TRIM27-202ENST00000377199 ANKRD13DQ6ZTN6 518 aa19.43■□□□□ 0.7
TRIM27-202ENST00000377199 ZSWIM6Q9HCJ5 1215 aa19.43■□□□□ 0.7
TRIM27-202ENST00000377199 EPB41L2O43491 1005 aaKnown RBP19.42■□□□□ 0.7
TRIM27-202ENST00000377199 LARP1BQ659C4 914 aaKnown RBP19.42■□□□□ 0.7
TRIM27-202ENST00000377199 IL17RAQ96F46 866 aa19.42■□□□□ 0.7
TRIM27-202ENST00000377199 TFCP2Q12800 502 aa19.42■□□□□ 0.7
TRIM27-202ENST00000377199 MTMR6Q9Y217 621 aa19.42■□□□□ 0.7
TRIM27-202ENST00000377199 CHD2O14647 1828 aaKnown RBP19.42■□□□□ 0.7
TRIM27-202ENST00000377199 PHKG2P15735 406 aa19.41■□□□□ 0.7
TRIM27-202ENST00000377199 BLOC1S2Q6QNY1 142 aa19.41■□□□□ 0.7
TRIM27-202ENST00000377199 SEC62Q99442 399 aaKnown RBP19.41■□□□□ 0.7
TRIM27-202ENST00000377199 PPFIA3O75145 1194 aa19.41■□□□□ 0.7
TRIM27-202ENST00000377199 CCDC183Q5T5S1 534 aa19.41■□□□□ 0.7
TRIM27-202ENST00000377199 FOSBP53539 338 aa19.41■□□□□ 0.7
TRIM27-202ENST00000377199 SLFNL1Q499Z3 407 aa19.41■□□□□ 0.7
TRIM27-202ENST00000377199 LRRC2Q9BYS8 371 aa19.41■□□□□ 0.7
TRIM27-202ENST00000377199 A0A087WZG4 1122 aa19.4■□□□□ 0.7
TRIM27-202ENST00000377199 UBE2HP62256 183 aa19.4■□□□□ 0.7
TRIM27-202ENST00000377199 DDX46Q7L014 1031 aaKnown RBP19.4■□□□□ 0.7
TRIM27-202ENST00000377199 CDC37L1Q7L3B6 337 aa19.4■□□□□ 0.7
TRIM27-202ENST00000377199 MAP4K1Q92918 833 aa19.4■□□□□ 0.7
TRIM27-202ENST00000377199 ZKSCAN5Q9Y2L8 839 aa19.4■□□□□ 0.7
TRIM27-202ENST00000377199 ZNF330Q9Y3S2 320 aaPredicted RBP19.4■□□□□ 0.7
TRIM27-202ENST00000377199 ATP6V1DQ9Y5K8 247 aa19.4■□□□□ 0.7
TRIM27-202ENST00000377199 HSP90AA2PQ14568 343 aaPredicted RBP19.39■□□□□ 0.7
TRIM27-202ENST00000377199 CAMK4Q16566 473 aa19.39■□□□□ 0.7
TRIM27-202ENST00000377199 METTL22Q9BUU2 404 aaPredicted RBP19.39■□□□□ 0.7
TRIM27-202ENST00000377199 CCDC39Q9UFE4 941 aa19.39■□□□□ 0.7
TRIM27-202ENST00000377199 DBNLQ9UJU6 430 aaKnown RBP19.39■□□□□ 0.7
TRIM27-202ENST00000377199 NPHP4O75161 1426 aaPredicted RBP19.39■□□□□ 0.69
TRIM27-202ENST00000377199 HEG1Q9ULI3 1381 aa19.39■□□□□ 0.69
TRIM27-202ENST00000377199 RBM10P98175 930 aaKnown RBP19.39■□□□□ 0.69
TRIM27-202ENST00000377199 NEUROD6Q96NK8 337 aa19.39■□□□□ 0.69
TRIM27-202ENST00000377199 TFIP11Q9UBB9 837 aaKnown RBP19.39■□□□□ 0.69
TRIM27-202ENST00000377199 N4BP2Q86UW6 1770 aaPredicted RBP19.39■□□□□ 0.69
TRIM27-202ENST00000377199 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.38■□□□□ 0.69
TRIM27-202ENST00000377199 NCAPD2Q15021 1401 aa19.38■□□□□ 0.69
TRIM27-202ENST00000377199 LMO7Q8WWI1 1683 aa19.38■□□□□ 0.69
TRIM27-202ENST00000377199 OFD1O75665 1012 aa19.38■□□□□ 0.69
TRIM27-202ENST00000377199 ATF3P18847 181 aa19.38■□□□□ 0.69
TRIM27-202ENST00000377199 DBNDD2Q9BQY9 259 aa19.38■□□□□ 0.69
TRIM27-202ENST00000377199 IFNL2Q8IZJ0 200 aa19.38■□□□□ 0.69
TRIM27-202ENST00000377199 ZSCAN31Q96LW9 406 aaPredicted RBP19.38■□□□□ 0.69
TRIM27-202ENST00000377199 SH2B1Q9NRF2 756 aaPredicted RBP19.38■□□□□ 0.69
TRIM27-202ENST00000377199 KDM6AO15550 1401 aaPredicted RBP19.37■□□□□ 0.69
TRIM27-202ENST00000377199 CYP27B1O15528 508 aa19.37■□□□□ 0.69
TRIM27-202ENST00000377199 HSP90B1P14625 803 aaKnown RBP19.37■□□□□ 0.69
TRIM27-202ENST00000377199 CABP4P57796 275 aa19.37■□□□□ 0.69
TRIM27-202ENST00000377199 RNF20Q5VTR2 975 aa19.37■□□□□ 0.69
TRIM27-202ENST00000377199 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.37■□□□□ 0.69
TRIM27-202ENST00000377199 HIP1O00291 1037 aa19.37■□□□□ 0.69
TRIM27-202ENST00000377199 FGD1P98174 961 aa19.37■□□□□ 0.69
TRIM27-202ENST00000377199 NAP1L2Q9ULW6 460 aaPredicted RBP19.37■□□□□ 0.69
TRIM27-202ENST00000377199 SNRPA1P09661 255 aaKnown RBP19.36■□□□□ 0.69
TRIM27-202ENST00000377199 PSMA5P28066 241 aa19.36■□□□□ 0.69
TRIM27-202ENST00000377199 DNTTIP2Q5QJE6 756 aaKnown RBP19.36■□□□□ 0.69
TRIM27-202ENST00000377199 ARID3AQ99856 593 aa19.36■□□□□ 0.69
TRIM27-202ENST00000377199 C17orf53Q8N3J3 647 aaPredicted RBP19.36■□□□□ 0.69
TRIM27-202ENST00000377199 DDX11Q96FC9 970 aa19.36■□□□□ 0.69
TRIM27-202ENST00000377199 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.36■□□□□ 0.69
TRIM27-202ENST00000377199 USP54Q70EL1 1684 aa19.36■□□□□ 0.69
TRIM27-202ENST00000377199 ADCY5O95622 1261 aa19.35■□□□□ 0.69
TRIM27-202ENST00000377199 PTPN12Q05209 780 aaKnown RBP19.35■□□□□ 0.69
TRIM27-202ENST00000377199 TNNI3KQ59H18 835 aa19.35■□□□□ 0.69
TRIM27-202ENST00000377199 LMBR1LQ6UX01 489 aa19.35■□□□□ 0.69
TRIM27-202ENST00000377199 TM6SF1Q9BZW5 370 aa19.35■□□□□ 0.69
TRIM27-202ENST00000377199 C19orf44Q9H6X5 657 aa19.35■□□□□ 0.69
TRIM27-202ENST00000377199 TTC12Q9H892 705 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms