RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ARHGEF25Q86VW2 580 aa15.44■□□□□ 0.06
USP11-204ENST00000377107 TAF6LQ9Y6J9 622 aa15.44■□□□□ 0.06
USP11-204ENST00000377107 AKAP12Q02952 1782 aa15.44■□□□□ 0.06
USP11-204ENST00000377107 UBR1Q8IWV7 1749 aa15.44■□□□□ 0.06
USP11-204ENST00000377107 EPHA10Q5JZY3 1008 aa15.44■□□□□ 0.06
USP11-204ENST00000377107 ZNF790Q6PG37 636 aa15.44■□□□□ 0.06
USP11-204ENST00000377107 CKAP2LQ8IYA6 745 aa15.44■□□□□ 0.06
USP11-204ENST00000377107 TTC12Q9H892 705 aaPredicted RBP15.44■□□□□ 0.06
USP11-204ENST00000377107 BABAM1Q9NWV8 329 aa15.44■□□□□ 0.06
USP11-204ENST00000377107 SLFNL1Q499Z3 407 aa15.43■□□□□ 0.06
USP11-204ENST00000377107 LARP1Q6PKG0 1096 aaKnown RBP15.43■□□□□ 0.06
USP11-204ENST00000377107 SEC62Q99442 399 aaKnown RBP15.43■□□□□ 0.06
USP11-204ENST00000377107 CCDC39Q9UFE4 941 aa15.43■□□□□ 0.06
USP11-204ENST00000377107 CCDC171Q6TFL3 1326 aa15.43■□□□□ 0.06
USP11-204ENST00000377107 ALDH1L1O75891 902 aa15.43■□□□□ 0.06
USP11-204ENST00000377107 ANKRD13DQ6ZTN6 518 aa15.43■□□□□ 0.06
USP11-204ENST00000377107 DRC7Q8IY82 874 aa15.43■□□□□ 0.06
USP11-204ENST00000377107 DDX21Q9NR30 783 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP11-204ENST00000377107 KIAA2012Q0VF49 1180 aa15.43■□□□□ 0.06
USP11-204ENST00000377107 RNF20Q5VTR2 975 aa15.43■□□□□ 0.06
USP11-204ENST00000377107 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
USP11-204ENST00000377107 TTC41PQ6P2S7 1318 aa15.43■□□□□ 0.06
USP11-204ENST00000377107 KDM4AO75164 1064 aa15.42■□□□□ 0.06
USP11-204ENST00000377107 ATF3P18847 181 aa15.42■□□□□ 0.06
USP11-204ENST00000377107 CABP4P57796 275 aa15.42■□□□□ 0.06
USP11-204ENST00000377107 TFCP2Q12800 502 aa15.42■□□□□ 0.06
USP11-204ENST00000377107 H3BQV1 296 aa15.42■□□□□ 0.06
USP11-204ENST00000377107 IFFO2Q5TF58 517 aa15.42■□□□□ 0.06
USP11-204ENST00000377107 TPCN1Q9ULQ1 816 aa15.42■□□□□ 0.06
USP11-204ENST00000377107 CCDC183Q5T5S1 534 aa15.42■□□□□ 0.06
USP11-204ENST00000377107 ZNF589Q86UQ0 364 aaPredicted RBP15.42■□□□□ 0.06
USP11-204ENST00000377107 BICD2Q8TD16 824 aa15.42■□□□□ 0.06
USP11-204ENST00000377107 AOX1Q06278 1338 aa15.42■□□□□ 0.06
USP11-204ENST00000377107 REREQ9P2R6 1566 aa15.41■□□□□ 0.06
USP11-204ENST00000377107 IGKV5-2P06315 115 aa15.41■□□□□ 0.06
USP11-204ENST00000377107 ZBTB3Q9H5J0 574 aa15.41■□□□□ 0.06
USP11-204ENST00000377107 ADCY5O95622 1261 aa15.41■□□□□ 0.06
USP11-204ENST00000377107 VSIG10Q8N0Z9 540 aa15.4■□□□□ 0.06
USP11-204ENST00000377107 SLC27A2O14975 620 aa15.4■□□□□ 0.06
USP11-204ENST00000377107 HOXB7P09629 217 aa15.4■□□□□ 0.06
USP11-204ENST00000377107 PSMA5P28066 241 aa15.4■□□□□ 0.06
USP11-204ENST00000377107 TTC14Q96N46 770 aa15.4■□□□□ 0.06
USP11-204ENST00000377107 GORABQ5T7V8 394 aa15.4■□□□□ 0.06
USP11-204ENST00000377107 CDC37L1Q7L3B6 337 aa15.4■□□□□ 0.06
USP11-204ENST00000377107 CHST3Q7LGC8 479 aa15.4■□□□□ 0.06
USP11-204ENST00000377107 FAM184AQ8NB25 1140 aa15.4■□□□□ 0.06
USP11-204ENST00000377107 DBNDD2Q9BQY9 259 aa15.4■□□□□ 0.06
USP11-204ENST00000377107 ZKSCAN5Q9Y2L8 839 aa15.4■□□□□ 0.06
USP11-204ENST00000377107 UBE2HP62256 183 aa15.39■□□□□ 0.05
USP11-204ENST00000377107 GUCY1B3Q02153 619 aa15.39■□□□□ 0.05
USP11-204ENST00000377107 LMBR1LQ6UX01 489 aa15.39■□□□□ 0.05
USP11-204ENST00000377107 KAZALD1Q96I82 304 aa15.39■□□□□ 0.05
USP11-204ENST00000377107 CEMIPQ8WUJ3 1361 aa15.39■□□□□ 0.05
USP11-204ENST00000377107 GCKRQ14397 625 aa15.39■□□□□ 0.05
USP11-204ENST00000377107 SNRKQ9NRH2 765 aa15.39■□□□□ 0.05
USP11-204ENST00000377107 NOL7Q9UMY1 257 aaKnown RBP15.39■□□□□ 0.05
USP11-204ENST00000377107 UQCRHLA0A096LP55 91 aa15.39■□□□□ 0.05
USP11-204ENST00000377107 UQCRHP07919 91 aa15.39■□□□□ 0.05
USP11-204ENST00000377107 TIMM10P62072 90 aa15.39■□□□□ 0.05
USP11-204ENST00000377107 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.39■□□□□ 0.05
USP11-204ENST00000377107 NEURL1BA8MQ27 555 aa15.38■□□□□ 0.05
USP11-204ENST00000377107 GOLIM4O00461 696 aa15.38■□□□□ 0.05
USP11-204ENST00000377107 CCT2P78371 535 aaKnown RBP15.38■□□□□ 0.05
USP11-204ENST00000377107 STRN4Q9NRL3 753 aa15.38■□□□□ 0.05
USP11-204ENST00000377107 MTMR6Q9Y217 621 aa15.38■□□□□ 0.05
USP11-204ENST00000377107 FAM177BA6PVY3 158 aa15.38■□□□□ 0.05
USP11-204ENST00000377107 VPS53Q5VIR6 699 aa15.38■□□□□ 0.05
USP11-204ENST00000377107 RAB11FIP4Q86YS3 637 aa15.38■□□□□ 0.05
USP11-204ENST00000377107 JAK2O60674 1132 aa15.38■□□□□ 0.05
USP11-204ENST00000377107 OFD1O75665 1012 aa15.38■□□□□ 0.05
USP11-204ENST00000377107 KRT85P78386 507 aa15.38■□□□□ 0.05
USP11-204ENST00000377107 ZSCAN31Q96LW9 406 aaPredicted RBP15.38■□□□□ 0.05
USP11-204ENST00000377107 RPAP1Q9BWH6 1393 aaPredicted RBP15.37■□□□□ 0.05
USP11-204ENST00000377107 GLIPR1L2Q4G1C9 344 aa15.37■□□□□ 0.05
USP11-204ENST00000377107 FKBP4Q02790 459 aaKnown RBP eCLIP15.37■□□□□ 0.05
USP11-204ENST00000377107 CSPP1Q1MSJ5 1256 aa15.37■□□□□ 0.05
USP11-204ENST00000377107 ZNF594Q96JF6 807 aaPredicted RBP15.37■□□□□ 0.05
USP11-204ENST00000377107 SPATA32Q96LK8 384 aa15.37■□□□□ 0.05
USP11-204ENST00000377107 SLC52A2Q9HAB3 445 aa15.37■□□□□ 0.05
USP11-204ENST00000377107 PXDNQ92626 1479 aa15.37■□□□□ 0.05
USP11-204ENST00000377107 PIK3C2AO00443 1686 aa15.37■□□□□ 0.05
USP11-204ENST00000377107 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
USP11-204ENST00000377107 TSC1Q92574 1164 aa15.37■□□□□ 0.05
USP11-204ENST00000377107 SH2B1Q9NRF2 756 aaPredicted RBP15.37■□□□□ 0.05
USP11-204ENST00000377107 HIP1O00291 1037 aa15.36■□□□□ 0.05
USP11-204ENST00000377107 IFNL2Q8IZJ0 200 aa15.36■□□□□ 0.05
USP11-204ENST00000377107 BRF1Q92994 677 aa15.36■□□□□ 0.05
USP11-204ENST00000377107 ZSWIM6Q9HCJ5 1215 aa15.36■□□□□ 0.05
USP11-204ENST00000377107 DBNLQ9UJU6 430 aaKnown RBP15.36■□□□□ 0.05
USP11-204ENST00000377107 SNRPA1P09661 255 aaKnown RBP15.35■□□□□ 0.05
USP11-204ENST00000377107 NECTIN1Q15223 517 aa15.35■□□□□ 0.05
USP11-204ENST00000377107 TOM1L2Q6ZVM7 507 aa15.35■□□□□ 0.05
USP11-204ENST00000377107 ANKARQ7Z5J8 1434 aa15.35■□□□□ 0.05
USP11-204ENST00000377107 TAF7LQ5H9L4 462 aa15.35■□□□□ 0.05
USP11-204ENST00000377107 NPHP3Q7Z494 1330 aa15.35■□□□□ 0.05
USP11-204ENST00000377107 A1BGP04217 495 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 LIG1P18858 919 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 WASHC4Q2M389 1173 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 Q6ZUG5 572 aa15.34■□□□□ 0.05
USP11-204ENST00000377107 METTL22Q9BUU2 404 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms