RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 HIP1O00291 1037 aa28.8■■■□□ 2.2
SNX21-204ENST00000372542 MCM2P49736 904 aa28.8■■■□□ 2.2
SNX21-204ENST00000372542 TRIM28Q13263 835 aaKnown RBP28.8■■■□□ 2.2
SNX21-204ENST00000372542 TCIRG1Q13488 830 aa28.8■■■□□ 2.2
SNX21-204ENST00000372542 LMBR1LQ6UX01 489 aa28.8■■■□□ 2.2
SNX21-204ENST00000372542 DIAPH3Q9NSV4 1193 aa28.8■■■□□ 2.2
SNX21-204ENST00000372542 NWD2Q9ULI1 1742 aa28.79■■■□□ 2.2
SNX21-204ENST00000372542 TOM1O60784 492 aa28.79■■■□□ 2.2
SNX21-204ENST00000372542 CCDC8Q9H0W5 538 aaPredicted RBP28.79■■■□□ 2.2
SNX21-204ENST00000372542 RAD50Q92878 1312 aa28.79■■■□□ 2.2
SNX21-204ENST00000372542 ADAMTS2O95450 1211 aa28.78■■■□□ 2.2
SNX21-204ENST00000372542 HSPA4P34932 840 aa28.78■■■□□ 2.2
SNX21-204ENST00000372542 KIAA1211Q6ZU35 1233 aa28.78■■■□□ 2.2
SNX21-204ENST00000372542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.78■■■□□ 2.2
SNX21-204ENST00000372542 DOT1LQ8TEK3 1739 aa28.77■■■□□ 2.2
SNX21-204ENST00000372542 MCM4P33991 863 aa28.76■■■□□ 2.19
SNX21-204ENST00000372542 RAB3GAP1Q15042 981 aa28.76■■■□□ 2.19
SNX21-204ENST00000372542 TNNI3KQ59H18 835 aa28.76■■■□□ 2.19
SNX21-204ENST00000372542 IL25Q9H293 177 aa28.76■■■□□ 2.19
SNX21-204ENST00000372542 FPGT-TNNI3KV9GXZ4 949 aa28.76■■■□□ 2.19
SNX21-204ENST00000372542 TFCP2Q12800 502 aa28.74■■■□□ 2.19
SNX21-204ENST00000372542 CWC27Q6UX04 472 aaKnown RBP28.74■■■□□ 2.19
SNX21-204ENST00000372542 LSG1Q9H089 658 aaKnown RBP28.74■■■□□ 2.19
SNX21-204ENST00000372542 TLR7Q9NYK1 1049 aaKnown RBP28.74■■■□□ 2.19
SNX21-204ENST00000372542 MAP3K15Q6ZN16 1313 aa28.74■■■□□ 2.19
SNX21-204ENST00000372542 CYP19A1P11511 503 aaPredicted RBP28.73■■■□□ 2.19
SNX21-204ENST00000372542 NEK4P51957 841 aa28.73■■■□□ 2.19
SNX21-204ENST00000372542 GSE1Q14687 1217 aa28.73■■■□□ 2.19
SNX21-204ENST00000372542 DDB1Q16531 1140 aa28.73■■■□□ 2.19
SNX21-204ENST00000372542 CWC22Q9HCG8 908 aaKnown RBP28.73■■■□□ 2.19
SNX21-204ENST00000372542 PALD1Q9ULE6 856 aa28.73■■■□□ 2.19
SNX21-204ENST00000372542 CHMP3Q9Y3E7 222 aa28.73■■■□□ 2.19
SNX21-204ENST00000372542 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.73■■■□□ 2.19
SNX21-204ENST00000372542 HSP90AB3PQ58FF7 597 aa28.72■■■□□ 2.19
SNX21-204ENST00000372542 ZNF330Q9Y3S2 320 aaPredicted RBP28.72■■■□□ 2.19
SNX21-204ENST00000372542 SPATA31A5Q5VU36 1347 aa28.72■■■□□ 2.19
SNX21-204ENST00000372542 SPATA31A7Q8IWB4 1347 aa28.72■■■□□ 2.19
SNX21-204ENST00000372542 ATP5JP18859 108 aa28.71■■■□□ 2.19
SNX21-204ENST00000372542 GPR108Q9NPR9 543 aa28.71■■■□□ 2.19
SNX21-204ENST00000372542 SLIT2O94813 1529 aa28.71■■■□□ 2.19
SNX21-204ENST00000372542 PCCAP05165 728 aaPredicted RBP28.71■■■□□ 2.19
SNX21-204ENST00000372542 GIGYF2Q6Y7W6 1299 aaKnown RBP28.71■■■□□ 2.19
SNX21-204ENST00000372542 SYTL4Q96C24 671 aaPredicted RBP28.71■■■□□ 2.19
SNX21-204ENST00000372542 FOXD4L1Q9NU39 408 aa28.71■■■□□ 2.19
SNX21-204ENST00000372542 KAT6BQ8WYB5 2073 aa28.7■■■□□ 2.19
SNX21-204ENST00000372542 IL15P40933 162 aaPredicted RBP28.7■■■□□ 2.18
SNX21-204ENST00000372542 PRIM1P49642 420 aaKnown RBP28.7■■■□□ 2.18
SNX21-204ENST00000372542 BARGINQ6ZT62 677 aa28.7■■■□□ 2.18
SNX21-204ENST00000372542 DDX11L8A8MPP1 907 aa28.69■■■□□ 2.18
SNX21-204ENST00000372542 CIAO1O76071 339 aa28.69■■■□□ 2.18
SNX21-204ENST00000372542 GBP4Q96PP9 640 aa28.69■■■□□ 2.18
SNX21-204ENST00000372542 SLC4A9Q96Q91 983 aa28.69■■■□□ 2.18
SNX21-204ENST00000372542 PLA2G12BQ9BX93 195 aa28.69■■■□□ 2.18
SNX21-204ENST00000372542 BOLA2Q9H3K6 86 aa28.69■■■□□ 2.18
SNX21-204ENST00000372542 DBNLQ9UJU6 430 aaKnown RBP28.69■■■□□ 2.18
SNX21-204ENST00000372542 ANKRD36CQ5JPF3 1778 aa28.68■■■□□ 2.18
SNX21-204ENST00000372542 RFX7Q2KHR2 1363 aa28.68■■■□□ 2.18
SNX21-204ENST00000372542 TNPO1Q92973 898 aaKnown RBP28.68■■■□□ 2.18
SNX21-204ENST00000372542 SNRKQ9NRH2 765 aa28.68■■■□□ 2.18
SNX21-204ENST00000372542 FBXO3Q9UK99 471 aa28.68■■■□□ 2.18
SNX21-204ENST00000372542 NUTM2BA6NNL0 878 aaPredicted RBP28.67■■■□□ 2.18
SNX21-204ENST00000372542 NUTM2EB1AL46 878 aaPredicted RBP28.67■■■□□ 2.18
SNX21-204ENST00000372542 NUTM2AQ8IVF1 878 aaPredicted RBP28.67■■■□□ 2.18
SNX21-204ENST00000372542 ZBTB38Q8NAP3 1195 aaPredicted RBP28.67■■■□□ 2.18
SNX21-204ENST00000372542 NUCB2P80303 420 aa28.66■■■□□ 2.18
SNX21-204ENST00000372542 ATG9AQ7Z3C6 839 aa28.66■■■□□ 2.18
SNX21-204ENST00000372542 FSD1Q9BTV5 496 aa28.66■■■□□ 2.18
SNX21-204ENST00000372542 EYA2O00167 538 aa28.66■■■□□ 2.18
SNX21-204ENST00000372542 IL6STP40189 918 aaPredicted RBP28.66■■■□□ 2.18
SNX21-204ENST00000372542 PIP4K2BP78356 416 aa28.66■■■□□ 2.18
SNX21-204ENST00000372542 CDHR2Q9BYE9 1310 aa28.65■■■□□ 2.18
SNX21-204ENST00000372542 PTMSP20962 102 aa28.65■■■□□ 2.18
SNX21-204ENST00000372542 ERVV-1B6SEH8 477 aa28.64■■■□□ 2.18
SNX21-204ENST00000372542 SNX14Q9Y5W7 946 aa28.64■■■□□ 2.18
SNX21-204ENST00000372542 ZBTB1Q9Y2K1 713 aa28.64■■■□□ 2.17
SNX21-204ENST00000372542 CICQ96RK0 1608 aaPredicted RBP28.63■■■□□ 2.17
SNX21-204ENST00000372542 TMX3Q96JJ7 454 aa28.63■■■□□ 2.17
SNX21-204ENST00000372542 CCDC171Q6TFL3 1326 aa28.63■■■□□ 2.17
SNX21-204ENST00000372542 NMIQ13287 307 aaPredicted RBP28.62■■■□□ 2.17
SNX21-204ENST00000372542 CCDC57Q2TAC2 916 aa28.62■■■□□ 2.17
SNX21-204ENST00000372542 CLEC17AQ6ZS10 378 aa28.62■■■□□ 2.17
SNX21-204ENST00000372542 TICAM2Q86XR7 235 aa28.62■■■□□ 2.17
SNX21-204ENST00000372542 KCNB2Q92953 911 aa28.62■■■□□ 2.17
SNX21-204ENST00000372542 DBNDD2Q9BQY9 259 aa28.62■■■□□ 2.17
SNX21-204ENST00000372542 CUL4AQ13619 759 aa28.62■■■□□ 2.17
SNX21-204ENST00000372542 MARCH10Q8NA82 808 aaPredicted RBP28.62■■■□□ 2.17
SNX21-204ENST00000372542 ARXQ96QS3 562 aa28.62■■■□□ 2.17
SNX21-204ENST00000372542 HAUS7Q99871 368 aa28.62■■■□□ 2.17
SNX21-204ENST00000372542 NLRP10Q86W26 655 aa28.61■■■□□ 2.17
SNX21-204ENST00000372542 CSF1RP07333 972 aa28.6■■■□□ 2.17
SNX21-204ENST00000372542 INTS4Q96HW7 963 aaKnown RBP28.6■■■□□ 2.17
SNX21-204ENST00000372542 CCDC9Q9Y3X0 531 aaKnown RBP28.6■■■□□ 2.17
SNX21-204ENST00000372542 NUP98P52948 1817 aa28.6■■■□□ 2.17
SNX21-204ENST00000372542 ZNF609O15014 1411 aa28.6■■■□□ 2.17
SNX21-204ENST00000372542 HLFQ16534 295 aa28.59■■■□□ 2.17
SNX21-204ENST00000372542 PTH1RQ03431 593 aa28.59■■■□□ 2.17
SNX21-204ENST00000372542 FAM227BQ96M60 508 aa28.59■■■□□ 2.17
SNX21-204ENST00000372542 MED23Q9ULK4 1368 aa28.58■■■□□ 2.17
SNX21-204ENST00000372542 FAM89AQ96GI7 184 aa28.58■■■□□ 2.17
SNX21-204ENST00000372542 UPF3BQ9BZI7 483 aaKnown RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms