RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 BRCA1P38398 1863 aaKnown RBP5.52□□□□□ -1.53
CDR1-201ENST00000370532 NBPF6Q5VWK0 638 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 ZNF771Q7L3S4 317 aaPredicted RBP5.52□□□□□ -1.53
CDR1-201ENST00000370532 IFNL2Q8IZJ0 200 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 ZNF622Q969S3 477 aaKnown RBP eCLIP5.52□□□□□ -1.53
CDR1-201ENST00000370532 NBPF4Q96M43 638 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 SLC24A3Q9HC58 644 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 NRXN2Q9P2S2 1712 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 CCNL1Q9UK58 526 aaPredicted RBP5.52□□□□□ -1.53
CDR1-201ENST00000370532 PDZRN3Q9UPQ7 1066 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 DLEC1Q9Y238 1755 aa5.52□□□□□ -1.53
CDR1-201ENST00000370532 ZNF827Q17R98 1081 aa5.51□□□□□ -1.53
CDR1-201ENST00000370532 MORC1Q86VD1 984 aa5.51□□□□□ -1.53
CDR1-201ENST00000370532 ZC3H15Q8WU90 426 aaKnown RBP5.51□□□□□ -1.53
CDR1-201ENST00000370532 PPP1R9BQ96SB3 815 aa5.51□□□□□ -1.53
CDR1-201ENST00000370532 RYDENQ9NUL5 291 aaKnown RBP5.51□□□□□ -1.53
CDR1-201ENST00000370532 TJP1Q07157 1748 aa5.51□□□□□ -1.53
CDR1-201ENST00000370532 ZC3H4Q9UPT8 1303 aaKnown RBP5.51□□□□□ -1.53
CDR1-201ENST00000370532 FAM177BA6PVY3 158 aa5.51□□□□□ -1.53
CDR1-201ENST00000370532 DPYSL4O14531 572 aa5.51□□□□□ -1.53
CDR1-201ENST00000370532 SASS6Q6UVJ0 657 aa5.51□□□□□ -1.53
CDR1-201ENST00000370532 FHDC1Q9C0D6 1143 aaPredicted RBP5.51□□□□□ -1.53
CDR1-201ENST00000370532 GGNBP2Q9H3C7 697 aa5.51□□□□□ -1.53
CDR1-201ENST00000370532 LRRC4BQ9NT99 713 aa5.51□□□□□ -1.53
CDR1-201ENST00000370532 GEMIN8Q9NWZ8 242 aaKnown RBP5.51□□□□□ -1.53
CDR1-201ENST00000370532 TESPA1A2RU30 521 aaPredicted RBP5.5□□□□□ -1.53
CDR1-201ENST00000370532 ZNF500O60304 480 aaPredicted RBP5.5□□□□□ -1.53
CDR1-201ENST00000370532 PPP2R1AP30153 589 aa5.5□□□□□ -1.53
CDR1-201ENST00000370532 PRIM1P49642 420 aaKnown RBP5.5□□□□□ -1.53
CDR1-201ENST00000370532 CCDC173Q0VFZ6 552 aa5.5□□□□□ -1.53
CDR1-201ENST00000370532 PLEKHO1Q53GL0 409 aaPredicted RBP5.5□□□□□ -1.53
CDR1-201ENST00000370532 C20orf194Q5TEA3 1177 aa5.5□□□□□ -1.53
CDR1-201ENST00000370532 DDX27Q96GQ7 796 aaKnown RBP5.5□□□□□ -1.53
CDR1-201ENST00000370532 DCAF5Q96JK2 942 aa5.5□□□□□ -1.53
CDR1-201ENST00000370532 SIPA1L3O60292 1781 aaPredicted RBP5.5□□□□□ -1.53
CDR1-201ENST00000370532 ARFGEF2Q9Y6D5 1785 aa5.5□□□□□ -1.53
CDR1-201ENST00000370532 TULP2O00295 520 aa5.5□□□□□ -1.53
CDR1-201ENST00000370532 PLIN1O60240 522 aa5.5□□□□□ -1.53
CDR1-201ENST00000370532 SEC24BO95487 1268 aa5.5□□□□□ -1.53
CDR1-201ENST00000370532 TGFB2P61812 414 aa5.5□□□□□ -1.53
CDR1-201ENST00000370532 MKRN3Q13064 507 aaKnown RBP5.5□□□□□ -1.53
CDR1-201ENST00000370532 BECN1Q14457 450 aa5.5□□□□□ -1.53
CDR1-201ENST00000370532 YY1AP1Q9H869 796 aa5.5□□□□□ -1.53
CDR1-201ENST00000370532 KDM2BQ8NHM5 1336 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 PHKG2P15735 406 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 BRPF1P55201 1214 aaPredicted RBP5.49□□□□□ -1.53
CDR1-201ENST00000370532 GOLGA2Q08379 1002 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 MFSD10Q14728 455 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 AXDND1Q5T1B0 1012 aaPredicted RBP5.49□□□□□ -1.53
CDR1-201ENST00000370532 MICALL2Q8IY33 904 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 TFCP2L1Q9NZI6 479 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 TNRC6CQ9HCJ0 1690 aaKnown RBP5.49□□□□□ -1.53
CDR1-201ENST00000370532 IRF6O14896 467 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 CYP27B1O15528 508 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 ZBTB7AO95365 584 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 PTF1AQ7RTS3 328 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 EGFL6Q8IUX8 553 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 PNISRQ8TF01 805 aaKnown RBP5.49□□□□□ -1.53
CDR1-201ENST00000370532 ACSBG1Q96GR2 724 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 TRERF1Q96PN7 1200 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 CRBNQ96SW2 442 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 POLKQ9UBT6 870 aa5.49□□□□□ -1.53
CDR1-201ENST00000370532 C2orf72A6NCS6 295 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 ATMINO43313 823 aaPredicted RBP5.48□□□□□ -1.53
CDR1-201ENST00000370532 PTMAP06454 111 aaKnown RBP5.48□□□□□ -1.53
CDR1-201ENST00000370532 POTEIP0CG38 1075 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 CT47A1Q5JQC4 288 aaPredicted RBP5.48□□□□□ -1.53
CDR1-201ENST00000370532 TICAM2Q86XR7 235 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 NLGN1Q8N2Q7 840 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 MPNDQ8N594 471 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 DDX54Q8TDD1 881 aaKnown RBP5.48□□□□□ -1.53
CDR1-201ENST00000370532 ARHGEF1Q92888 912 aaKnown RBP5.48□□□□□ -1.53
CDR1-201ENST00000370532 AK7Q96M32 723 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 TMOD3Q9NYL9 352 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 ISY1Q9ULR0 285 aaKnown RBP5.48□□□□□ -1.53
CDR1-201ENST00000370532 NOL7Q9UMY1 257 aaKnown RBP5.48□□□□□ -1.53
CDR1-201ENST00000370532 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.48□□□□□ -1.53
CDR1-201ENST00000370532 SCN7AQ01118 1682 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 U2AF2P26368 475 aaKnown RBP eCLIP5.48□□□□□ -1.53
CDR1-201ENST00000370532 MTHFSP49914 203 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 HSP90AB2PQ58FF8 381 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 COL23A1Q86Y22 540 aaPredicted RBP5.48□□□□□ -1.53
CDR1-201ENST00000370532 EYA1Q99502 592 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 RCAN3Q9UKA8 241 aa5.48□□□□□ -1.53
CDR1-201ENST00000370532 PXDNLA1KZ92 1463 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 LOC102724428A0A0B4J2F2 783 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 RPS6KA4O75676 772 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 TIE1P35590 1138 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 NASPP49321 788 aaPredicted RBP5.47□□□□□ -1.53
CDR1-201ENST00000370532 SIK1P57059 783 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 ZNF784Q8NCA9 323 aaPredicted RBP5.47□□□□□ -1.53
CDR1-201ENST00000370532 MYRIPQ8NFW9 859 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 TIGD1Q96MW7 591 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 TBC1D2Q9BYX2 928 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 GPBP1L1Q9HC44 474 aaPredicted RBP5.47□□□□□ -1.53
CDR1-201ENST00000370532 COL3A1P02461 1466 aaPredicted RBP5.47□□□□□ -1.53
CDR1-201ENST00000370532 SLFN14P0C7P3 912 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 FBLN1P23142 703 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 EIF4A2Q14240 407 aaKnown RBP5.47□□□□□ -1.53
CDR1-201ENST00000370532 RRS1Q15050 365 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms