RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 DRC7Q8IY82 874 aa15.37■□□□□ 0.05
CHD1L-202ENST00000369258 HDGFP51858 240 aaKnown RBP15.37■□□□□ 0.05
CHD1L-202ENST00000369258 NAP1L2Q9ULW6 460 aaPredicted RBP15.37■□□□□ 0.05
CHD1L-202ENST00000369258 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
CHD1L-202ENST00000369258 CYP46A1Q9Y6A2 500 aa15.37■□□□□ 0.05
CHD1L-202ENST00000369258 SASH1O94885 1247 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 PPP4R3BQ5MIZ7 849 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 CREB3L3Q68CJ9 461 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 BICC1Q9H694 974 aaKnown RBP15.36■□□□□ 0.05
CHD1L-202ENST00000369258 KIF3AQ9Y496 699 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 KDRP35968 1356 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 RIOK3O14730 519 aaKnown RBP15.36■□□□□ 0.05
CHD1L-202ENST00000369258 ZNF530Q6P9A1 599 aaPredicted RBP15.36■□□□□ 0.05
CHD1L-202ENST00000369258 SUCLG2Q96I99 432 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 USP16Q9Y5T5 823 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 ADCY9O60503 1353 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 TNRQ92752 1358 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 GUCY1B3Q02153 619 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 CHST3Q7LGC8 479 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 FUCA2Q9BTY2 467 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 BCL2L12Q9HB09 334 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHD1L-202ENST00000369258 V9GYY5 206 aaPredicted RBP15.36■□□□□ 0.05
CHD1L-202ENST00000369258 USP31Q70CQ4 1352 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 AKAP12Q02952 1782 aa15.36■□□□□ 0.05
CHD1L-202ENST00000369258 U2AF2P26368 475 aaKnown RBP eCLIP15.35■□□□□ 0.053e-7■■■□□ 14.6
CHD1L-202ENST00000369258 ANO6Q4KMQ2 910 aa15.35■□□□□ 0.05
CHD1L-202ENST00000369258 CCDC186Q7Z3E2 898 aa15.35■□□□□ 0.05
CHD1L-202ENST00000369258 KAZALD1Q96I82 304 aa15.35■□□□□ 0.05
CHD1L-202ENST00000369258 FSD1Q9BTV5 496 aa15.35■□□□□ 0.05
CHD1L-202ENST00000369258 SPTLC3Q9NUV7 552 aa15.35■□□□□ 0.05
CHD1L-202ENST00000369258 SRCAPQ6ZRS2 3230 aa15.35■□□□□ 0.05
CHD1L-202ENST00000369258 NR1I2O75469 434 aa15.35■□□□□ 0.05
CHD1L-202ENST00000369258 EPHA10Q5JZY3 1008 aa15.34■□□□□ 0.05
CHD1L-202ENST00000369258 ZNF592Q92610 1267 aa15.34■□□□□ 0.05
CHD1L-202ENST00000369258 DNAJC25Q9H1X3 360 aa15.34■□□□□ 0.05
CHD1L-202ENST00000369258 ECHDC1Q9NTX5 307 aa15.34■□□□□ 0.05
CHD1L-202ENST00000369258 HTATSF1O43719 755 aaKnown RBP15.33■□□□□ 0.05
CHD1L-202ENST00000369258 GLRX3O76003 335 aaKnown RBP15.33■□□□□ 0.05
CHD1L-202ENST00000369258 GTF2F1P35269 517 aaKnown RBP eCLIP15.33■□□□□ 0.05
CHD1L-202ENST00000369258 RAB11FIP4Q86YS3 637 aa15.33■□□□□ 0.05
CHD1L-202ENST00000369258 TUBGCP6Q96RT7 1819 aa15.33■□□□□ 0.05
CHD1L-202ENST00000369258 SLC27A2O14975 620 aa15.33■□□□□ 0.04
CHD1L-202ENST00000369258 CHAF1AQ13111 956 aaPredicted RBP15.33■□□□□ 0.04
CHD1L-202ENST00000369258 NECTIN1Q15223 517 aa15.33■□□□□ 0.04
CHD1L-202ENST00000369258 DNAJC2Q99543 621 aaKnown RBP15.33■□□□□ 0.04
CHD1L-202ENST00000369258 MRVI1Q9Y6F6 885 aa15.33■□□□□ 0.04
CHD1L-202ENST00000369258 CCDC171Q6TFL3 1326 aa15.33■□□□□ 0.04
CHD1L-202ENST00000369258 XRN1Q8IZH2 1706 aaKnown RBP15.33■□□□□ 0.04
CHD1L-202ENST00000369258 NPHP1O15259 732 aa15.33■□□□□ 0.04
CHD1L-202ENST00000369258 TECPR2O15040 1411 aa15.32■□□□□ 0.04
CHD1L-202ENST00000369258 GOLGA6L6A8MZA4 724 aa15.32■□□□□ 0.04
CHD1L-202ENST00000369258 CCDC192P0DO97 292 aa15.32■□□□□ 0.04
CHD1L-202ENST00000369258 TYRO3Q06418 890 aa15.32■□□□□ 0.04
CHD1L-202ENST00000369258 SPATA31D1Q6ZQQ2 1576 aa15.32■□□□□ 0.04
CHD1L-202ENST00000369258 TPM3P06753 285 aa15.32■□□□□ 0.04
CHD1L-202ENST00000369258 RUFY2Q8WXA3 655 aa15.32■□□□□ 0.04
CHD1L-202ENST00000369258 ZSWIM6Q9HCJ5 1215 aa15.32■□□□□ 0.04
CHD1L-202ENST00000369258 RGPD1P0DJD0 1748 aa15.32■□□□□ 0.04
CHD1L-202ENST00000369258 GOLGA6L4A6NEF3 574 aa15.31■□□□□ 0.04
CHD1L-202ENST00000369258 KIAA1524Q8TCG1 905 aa15.31■□□□□ 0.04
CHD1L-202ENST00000369258 BICD2Q8TD16 824 aa15.31■□□□□ 0.04
CHD1L-202ENST00000369258 TRIM5Q9C035 493 aa15.31■□□□□ 0.04
CHD1L-202ENST00000369258 ATP5J2-PTCD1G3V325 749 aa15.31■□□□□ 0.04
CHD1L-202ENST00000369258 PTCD1O75127 700 aaKnown RBP15.31■□□□□ 0.04
CHD1L-202ENST00000369258 ZSCAN31Q96LW9 406 aaPredicted RBP15.31■□□□□ 0.04
CHD1L-202ENST00000369258 CBX8Q9HC52 389 aa15.31■□□□□ 0.04
CHD1L-202ENST00000369258 ZKSCAN1P17029 563 aaPredicted RBP15.3■□□□□ 0.04
CHD1L-202ENST00000369258 PTPN21Q16825 1174 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 ESCO1Q5FWF5 840 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
CHD1L-202ENST00000369258 ZBTB9Q96C00 473 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 PGBD1Q96JS3 809 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 NUP62CLQ9H1M0 184 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 TNMDQ9H2S6 317 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 HSP90B1P14625 803 aaKnown RBP15.3■□□□□ 0.04
CHD1L-202ENST00000369258 CCT2P78371 535 aaKnown RBP15.3■□□□□ 0.04
CHD1L-202ENST00000369258 TOB2Q14106 344 aaPredicted RBP15.3■□□□□ 0.04
CHD1L-202ENST00000369258 CCDC144BQ3MJ40 725 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 CCDC144CPQ8IYA2 1237 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 SPATA32Q96LK8 384 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 SH2B1Q9NRF2 756 aaPredicted RBP15.3■□□□□ 0.04
CHD1L-202ENST00000369258 HSP90AB4PQ58FF6 505 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 VPS53Q5VIR6 699 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 NCOA5Q9HCD5 579 aaKnown RBP15.3■□□□□ 0.04
CHD1L-202ENST00000369258 EID1Q9Y6B2 187 aa15.3■□□□□ 0.04
CHD1L-202ENST00000369258 USP27XA6NNY8 438 aa15.29■□□□□ 0.04
CHD1L-202ENST00000369258 MAP3K11Q16584 847 aa15.29■□□□□ 0.04
CHD1L-202ENST00000369258 BLOC1S2Q6QNY1 142 aa15.29■□□□□ 0.04
CHD1L-202ENST00000369258 COL15A1P39059 1388 aa15.28■□□□□ 0.04
CHD1L-202ENST00000369258 FAM208AQ9UK61 1670 aaKnown RBP15.28■□□□□ 0.04
CHD1L-202ENST00000369258 G3BP1Q13283 466 aaKnown RBP eCLIP15.28■□□□□ 0.042e-7■□□□□ 8.3
CHD1L-202ENST00000369258 TRMT1Q9NXH9 659 aaKnown RBP15.28■□□□□ 0.04
CHD1L-202ENST00000369258 AXIN2Q9Y2T1 843 aa15.28■□□□□ 0.04
CHD1L-202ENST00000369258 TTC21AQ8NDW8 1320 aa15.28■□□□□ 0.04
CHD1L-202ENST00000369258 KRT85P78386 507 aa15.28■□□□□ 0.04
CHD1L-202ENST00000369258 OTUD7BQ6GQQ9 843 aa15.28■□□□□ 0.04
CHD1L-202ENST00000369258 GJB4Q9NTQ9 266 aa15.28■□□□□ 0.04
CHD1L-202ENST00000369258 KLHL34Q8N239 644 aa15.27■□□□□ 0.04
CHD1L-202ENST00000369258 PDCL2Q8N4E4 241 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms