RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 FAM114A1Q8IWE2 563 aa18.08■□□□□ 0.48
PRDM1-203ENST00000369096 TTC21AQ8NDW8 1320 aa18.08■□□□□ 0.48
PRDM1-203ENST00000369096 A0A087WZG4 1122 aa18.08■□□□□ 0.48
PRDM1-203ENST00000369096 N4BP3O15049 544 aa18.08■□□□□ 0.48
PRDM1-203ENST00000369096 TTLL12Q14166 644 aaPredicted RBP18.08■□□□□ 0.48
PRDM1-203ENST00000369096 APBB1IPQ7Z5R6 666 aaPredicted RBP18.08■□□□□ 0.48
PRDM1-203ENST00000369096 PAIP2Q9BPZ3 127 aaKnown RBP18.08■□□□□ 0.48
PRDM1-203ENST00000369096 IFIT5Q13325 482 aaKnown RBP18.07■□□□□ 0.48
PRDM1-203ENST00000369096 NFE2L2Q16236 605 aa18.07■□□□□ 0.48
PRDM1-203ENST00000369096 CCDC174Q6PII3 467 aa18.07■□□□□ 0.48
PRDM1-203ENST00000369096 THUMPD2Q9BTF0 503 aaKnown RBP18.07■□□□□ 0.48
PRDM1-203ENST00000369096 VAT1LQ9HCJ6 419 aa18.07■□□□□ 0.48
PRDM1-203ENST00000369096 SAMM50Q9Y512 469 aa18.07■□□□□ 0.48
PRDM1-203ENST00000369096 GNAT3A8MTJ3 354 aa18.07■□□□□ 0.48
PRDM1-203ENST00000369096 IARSP41252 1262 aaKnown RBP18.07■□□□□ 0.48
PRDM1-203ENST00000369096 DAAM2Q86T65 1068 aa18.07■□□□□ 0.48
PRDM1-203ENST00000369096 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
PRDM1-203ENST00000369096 AFAP1Q8N556 730 aa18.07■□□□□ 0.48
PRDM1-203ENST00000369096 MYD88Q99836 296 aa18.07■□□□□ 0.48
PRDM1-203ENST00000369096 TARBP1Q13395 1621 aaKnown RBP18.06■□□□□ 0.48
PRDM1-203ENST00000369096 SPAG5Q96R06 1193 aa18.06■□□□□ 0.48
PRDM1-203ENST00000369096 SREK1Q8WXA9 508 aaKnown RBP18.06■□□□□ 0.48
PRDM1-203ENST00000369096 ATRIPQ8WXE1 791 aa18.06■□□□□ 0.48
PRDM1-203ENST00000369096 TNPO1Q92973 898 aaKnown RBP18.06■□□□□ 0.48
PRDM1-203ENST00000369096 PLVAPQ9BX97 442 aa18.06■□□□□ 0.48
PRDM1-203ENST00000369096 MMRN2Q9H8L6 949 aa18.06■□□□□ 0.48
PRDM1-203ENST00000369096 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
PRDM1-203ENST00000369096 EHBP1Q8NDI1 1231 aa18.06■□□□□ 0.48
PRDM1-203ENST00000369096 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
PRDM1-203ENST00000369096 CEP135Q66GS9 1140 aa18.05■□□□□ 0.48
PRDM1-203ENST00000369096 CCDC102BQ68D86 513 aa18.05■□□□□ 0.48
PRDM1-203ENST00000369096 CCDC144CPQ8IYA2 1237 aa18.05■□□□□ 0.48
PRDM1-203ENST00000369096 TRIM47Q96LD4 638 aa18.05■□□□□ 0.48
PRDM1-203ENST00000369096 STX6O43752 255 aa18.05■□□□□ 0.48
PRDM1-203ENST00000369096 ZPR1O75312 459 aa18.05■□□□□ 0.48
PRDM1-203ENST00000369096 TMPOP42166 694 aaKnown RBP18.05■□□□□ 0.48
PRDM1-203ENST00000369096 IFI16Q16666 785 aaKnown RBP18.05■□□□□ 0.48
PRDM1-203ENST00000369096 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
PRDM1-203ENST00000369096 PPFIA3O75145 1194 aa18.04■□□□□ 0.48
PRDM1-203ENST00000369096 KIF4AO95239 1232 aa18.04■□□□□ 0.48
PRDM1-203ENST00000369096 MCM10Q7L590 875 aa18.04■□□□□ 0.48
PRDM1-203ENST00000369096 PLEKHH1Q9ULM0 1364 aa18.04■□□□□ 0.48
PRDM1-203ENST00000369096 PAXIP1Q6ZW49 1069 aaPredicted RBP18.04■□□□□ 0.48
PRDM1-203ENST00000369096 DDX12PQ92771 950 aa18.04■□□□□ 0.48
PRDM1-203ENST00000369096 SYNCQ9H7C4 482 aa18.04■□□□□ 0.48
PRDM1-203ENST00000369096 SLC5A1P13866 664 aa18.04■□□□□ 0.48
PRDM1-203ENST00000369096 TAF7Q15545 349 aaPredicted RBP18.04■□□□□ 0.48
PRDM1-203ENST00000369096 ORC3Q9UBD5 711 aaPredicted RBP18.04■□□□□ 0.48
PRDM1-203ENST00000369096 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
PRDM1-203ENST00000369096 PRG4Q92954 1404 aaPredicted RBP18.04■□□□□ 0.48
PRDM1-203ENST00000369096 MICU3Q86XE3 530 aa18.03■□□□□ 0.48
PRDM1-203ENST00000369096 SRRTQ9BXP5 876 aaKnown RBP18.03■□□□□ 0.48
PRDM1-203ENST00000369096 RSPH14Q9UHP6 348 aa18.03■□□□□ 0.48
PRDM1-203ENST00000369096 NDC80O14777 642 aa18.03■□□□□ 0.48
PRDM1-203ENST00000369096 THEMISQ8N1K5 641 aaPredicted RBP18.03■□□□□ 0.48
PRDM1-203ENST00000369096 GJB2P29033 226 aa18.03■□□□□ 0.48
PRDM1-203ENST00000369096 NSRP1Q9H0G5 558 aaKnown RBP18.03■□□□□ 0.48
PRDM1-203ENST00000369096 TIGD1Q96MW7 591 aa18.03■□□□□ 0.48
PRDM1-203ENST00000369096 ZBTB16Q05516 673 aa18.02■□□□□ 0.48
PRDM1-203ENST00000369096 MCM6Q14566 821 aa18.02■□□□□ 0.48
PRDM1-203ENST00000369096 SMC6Q96SB8 1091 aa18.02■□□□□ 0.48
PRDM1-203ENST00000369096 HYPKQ9NX55 129 aa18.02■□□□□ 0.48
PRDM1-203ENST00000369096 TRMT112Q9UI30 125 aaKnown RBP18.02■□□□□ 0.48
PRDM1-203ENST00000369096 TBCAO75347 108 aaKnown RBP18.02■□□□□ 0.48
PRDM1-203ENST00000369096 KIF5BP33176 963 aa18.02■□□□□ 0.48
PRDM1-203ENST00000369096 BICD1Q96G01 975 aa18.02■□□□□ 0.48
PRDM1-203ENST00000369096 TMEM67Q5HYA8 995 aa18.02■□□□□ 0.48
PRDM1-203ENST00000369096 ZNF354CQ86Y25 554 aa18.02■□□□□ 0.48
PRDM1-203ENST00000369096 RGS22Q8NE09 1264 aa18.02■□□□□ 0.48
PRDM1-203ENST00000369096 RTEL1-TNFRSF6BF6WH68 1400 aa18.02■□□□□ 0.48
PRDM1-203ENST00000369096 CCDC172P0C7W6 258 aa18.02■□□□□ 0.47
PRDM1-203ENST00000369096 PSMC4P43686 418 aa18.02■□□□□ 0.47
PRDM1-203ENST00000369096 KANK3Q6NY19 840 aa18.02■□□□□ 0.47
PRDM1-203ENST00000369096 CCDC77Q9BR77 488 aa18.02■□□□□ 0.47
PRDM1-203ENST00000369096 WDR62O43379 1518 aa18.02■□□□□ 0.47
PRDM1-203ENST00000369096 ARFGAP3Q9NP61 516 aa18.02■□□□□ 0.47
PRDM1-203ENST00000369096 RAB11FIP4Q86YS3 637 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 PYM1Q9BRP8 204 aaKnown RBP18.01■□□□□ 0.47
PRDM1-203ENST00000369096 CTAGE15A4D2H0 777 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 CTAGE8P0CG41 777 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 MCM5P33992 734 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 MRPS9P82933 396 aaKnown RBP18.01■□□□□ 0.47
PRDM1-203ENST00000369096 CTAGE6Q86UF2 777 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 CTAGE4Q8IX94 777 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 TSPY2A6NKD2 308 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 SLF2Q8IX21 1173 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 KRT222Q8N1A0 295 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 PAXBP1Q9Y5B6 917 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 GOLIM4O00461 696 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
PRDM1-203ENST00000369096 F6X3S4 739 aa18■□□□□ 0.47
PRDM1-203ENST00000369096 SLFN5Q08AF3 891 aa18■□□□□ 0.47
PRDM1-203ENST00000369096 OTUD6BQ8N6M0 293 aa18■□□□□ 0.47
PRDM1-203ENST00000369096 ZNF219Q9P2Y4 722 aaPredicted RBP18■□□□□ 0.47
PRDM1-203ENST00000369096 TBC1D2Q9BYX2 928 aa18■□□□□ 0.47
PRDM1-203ENST00000369096 HAND2P61296 217 aa18■□□□□ 0.47
PRDM1-203ENST00000369096 HCLS1P14317 486 aaPredicted RBP18■□□□□ 0.47
PRDM1-203ENST00000369096 CYLC1P35663 651 aaPredicted RBP18■□□□□ 0.47
PRDM1-203ENST00000369096 SSH1Q8WYL5 1049 aa18■□□□□ 0.47
PRDM1-203ENST00000369096 EXOC1Q9NV70 894 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms