RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TAF1DQ9H5J8 278 aaPredicted RBP12.93□□□□□ -0.34
TPM3-210ENST00000368530 MIS18AQ9NYP9 233 aa12.93□□□□□ -0.34
TPM3-210ENST00000368530 NIP7Q9Y221 180 aaKnown RBP eCLIP12.93□□□□□ -0.34
TPM3-210ENST00000368530 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
TPM3-210ENST00000368530 NPHP1O15259 732 aa12.93□□□□□ -0.34
TPM3-210ENST00000368530 ITGBL1O95965 494 aaPredicted RBP12.93□□□□□ -0.34
TPM3-210ENST00000368530 RUNDC1Q96C34 613 aa12.93□□□□□ -0.34
TPM3-210ENST00000368530 ZNF277Q9NRM2 450 aaPredicted RBP12.93□□□□□ -0.34
TPM3-210ENST00000368530 ZNF541Q9H0D2 1346 aa12.92□□□□□ -0.34
TPM3-210ENST00000368530 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
TPM3-210ENST00000368530 RRP7AQ9Y3A4 280 aaKnown RBP12.92□□□□□ -0.34
TPM3-210ENST00000368530 FZD9O00144 591 aa12.91□□□□□ -0.34
TPM3-210ENST00000368530 CRY2Q49AN0 593 aa12.91□□□□□ -0.34
TPM3-210ENST00000368530 LDHDQ86WU2 507 aa12.91□□□□□ -0.34
TPM3-210ENST00000368530 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
TPM3-210ENST00000368530 MKRN1Q9UHC7 482 aaKnown RBP12.91□□□□□ -0.34
TPM3-210ENST00000368530 IQCA1LA6NCM1 817 aa12.9□□□□□ -0.34
TPM3-210ENST00000368530 FAM177BA6PVY3 158 aa12.9□□□□□ -0.34
TPM3-210ENST00000368530 RTKN2Q8IZC4 609 aa12.9□□□□□ -0.34
TPM3-210ENST00000368530 ZNF521Q96K83 1311 aa12.9□□□□□ -0.34
TPM3-210ENST00000368530 CACNA1SQ13698 1873 aa12.89□□□□□ -0.35
TPM3-210ENST00000368530 CNTNAP1P78357 1384 aa12.89□□□□□ -0.35
TPM3-210ENST00000368530 ABCC12Q96J65 1359 aa12.89□□□□□ -0.35
TPM3-210ENST00000368530 ERVV-1B6SEH8 477 aa12.89□□□□□ -0.35
TPM3-210ENST00000368530 ALDH1B1P30837 517 aa12.89□□□□□ -0.35
TPM3-210ENST00000368530 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
TPM3-210ENST00000368530 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
TPM3-210ENST00000368530 SYNE4Q8N205 404 aa12.89□□□□□ -0.35
TPM3-210ENST00000368530 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
TPM3-210ENST00000368530 HOXA10P31260 410 aaPredicted RBP12.88□□□□□ -0.35
TPM3-210ENST00000368530 IARSP41252 1262 aaKnown RBP12.88□□□□□ -0.35
TPM3-210ENST00000368530 TTLL7Q6ZT98 887 aa12.88□□□□□ -0.35
TPM3-210ENST00000368530 ADAMTSL1Q8N6G6 1762 aa12.88□□□□□ -0.35
TPM3-210ENST00000368530 SCN4AP35499 1836 aa12.88□□□□□ -0.35
TPM3-210ENST00000368530 SLC51AQ86UW1 340 aa12.88□□□□□ -0.35
TPM3-210ENST00000368530 NUTM1Q86Y26 1132 aa12.88□□□□□ -0.35
TPM3-210ENST00000368530 PSMD1Q99460 953 aa12.88□□□□□ -0.35
TPM3-210ENST00000368530 HACL1Q9UJ83 578 aa12.88□□□□□ -0.35
TPM3-210ENST00000368530 RCAN3Q9UKA8 241 aa12.88□□□□□ -0.35
TPM3-210ENST00000368530 COL4A5P29400 1685 aa12.87□□□□□ -0.35
TPM3-210ENST00000368530 MAP3K15Q6ZN16 1313 aa12.87□□□□□ -0.35
TPM3-210ENST00000368530 UBN2Q6ZU65 1347 aa12.87□□□□□ -0.35
TPM3-210ENST00000368530 FOXN1O15353 648 aa12.87□□□□□ -0.35
TPM3-210ENST00000368530 EPHX2P34913 555 aa12.87□□□□□ -0.35
TPM3-210ENST00000368530 LRP10Q7Z4F1 713 aa12.87□□□□□ -0.35
TPM3-210ENST00000368530 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
TPM3-210ENST00000368530 THUMPD2Q9BTF0 503 aaKnown RBP12.87□□□□□ -0.35
TPM3-210ENST00000368530 MAPK8IP3Q9UPT6 1336 aa12.86□□□□□ -0.35
TPM3-210ENST00000368530 RIC1Q4ADV7 1423 aa12.86□□□□□ -0.35
TPM3-210ENST00000368530 TMEM88BA6NKF7 163 aa12.86□□□□□ -0.35
TPM3-210ENST00000368530 VEGFBP49765 207 aa12.86□□□□□ -0.35
TPM3-210ENST00000368530 SLFN5Q08AF3 891 aa12.86□□□□□ -0.35
TPM3-210ENST00000368530 SUSD4Q5VX71 490 aa12.86□□□□□ -0.35
TPM3-210ENST00000368530 ZNF34Q8IZ26 560 aa12.86□□□□□ -0.35
TPM3-210ENST00000368530 GPC2Q8N158 579 aa12.86□□□□□ -0.35
TPM3-210ENST00000368530 RNF123Q5XPI4 1314 aa12.86□□□□□ -0.35
TPM3-210ENST00000368530 KDM3BQ7LBC6 1761 aa12.85□□□□□ -0.35
TPM3-210ENST00000368530 EAPPQ56P03 285 aaPredicted RBP12.85□□□□□ -0.35
TPM3-210ENST00000368530 C3orf67Q6ZVT6 689 aa12.85□□□□□ -0.35
TPM3-210ENST00000368530 WWC1Q8IX03 1113 aa12.85□□□□□ -0.35
TPM3-210ENST00000368530 NYXQ9GZU5 481 aa12.85□□□□□ -0.35
TPM3-210ENST00000368530 IBTKQ9P2D0 1353 aaPredicted RBP12.85□□□□□ -0.35
TPM3-210ENST00000368530 NTSR2O95665 410 aa12.84□□□□□ -0.35
TPM3-210ENST00000368530 GPTP24298 496 aa12.84□□□□□ -0.35
TPM3-210ENST00000368530 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
TPM3-210ENST00000368530 PDIA6Q15084 440 aa12.84□□□□□ -0.35
TPM3-210ENST00000368530 NFE2L2Q16236 605 aa12.84□□□□□ -0.35
TPM3-210ENST00000368530 DUSP27Q5VZP5 1158 aa12.84□□□□□ -0.35
TPM3-210ENST00000368530 MAP1SQ66K74 1059 aaPredicted RBP12.84□□□□□ -0.35
TPM3-210ENST00000368530 CC2D2BQ6DHV5 1058 aa12.84□□□□□ -0.35
TPM3-210ENST00000368530 PNMA8AQ86V59 439 aaPredicted RBP12.84□□□□□ -0.35
TPM3-210ENST00000368530 CNTROBQ8N137 903 aa12.84□□□□□ -0.35
TPM3-210ENST00000368530 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
TPM3-210ENST00000368530 RASSF10A6NK89 507 aa12.83□□□□□ -0.35
TPM3-210ENST00000368530 MYL6BP14649 208 aa12.83□□□□□ -0.35
TPM3-210ENST00000368530 GIGYF2Q6Y7W6 1299 aaKnown RBP12.83□□□□□ -0.35
TPM3-210ENST00000368530 CRAMP1Q96RY5 1269 aa12.83□□□□□ -0.35
TPM3-210ENST00000368530 ZBTB3Q9H5J0 574 aa12.83□□□□□ -0.35
TPM3-210ENST00000368530 WBP1LQ9NX94 342 aa12.83□□□□□ -0.35
TPM3-210ENST00000368530 E9PSI1 815 aa12.83□□□□□ -0.36
TPM3-210ENST00000368530 SCNN1DP51172 638 aa12.83□□□□□ -0.36
TPM3-210ENST00000368530 PNNQ9H307 717 aaKnown RBP12.83□□□□□ -0.36
TPM3-210ENST00000368530 PRDM10Q9NQV6 1147 aa12.83□□□□□ -0.36
TPM3-210ENST00000368530 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
TPM3-210ENST00000368530 LTBP1Q14766 1721 aa12.82□□□□□ -0.36
TPM3-210ENST00000368530 NUP98P52948 1817 aa12.82□□□□□ -0.36
TPM3-210ENST00000368530 TMPOP42166 694 aaKnown RBP12.82□□□□□ -0.36
TPM3-210ENST00000368530 EPS15P42566 896 aa12.82□□□□□ -0.36
TPM3-210ENST00000368530 RRP1P56182 461 aaKnown RBP12.82□□□□□ -0.36
TPM3-210ENST00000368530 FMR1Q06787 632 aaKnown RBP eCLIP12.82□□□□□ -0.36
TPM3-210ENST00000368530 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
TPM3-210ENST00000368530 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
TPM3-210ENST00000368530 DLG5Q8TDM6 1919 aa12.81□□□□□ -0.36
TPM3-210ENST00000368530 GRIPAP1Q4V328 841 aa12.81□□□□□ -0.36
TPM3-210ENST00000368530 KIF6Q6ZMV9 814 aa12.81□□□□□ -0.36
TPM3-210ENST00000368530 TRMT2AQ8IZ69 625 aaKnown RBP12.81□□□□□ -0.36
TPM3-210ENST00000368530 RPGRQ92834 1020 aaKnown RBP12.81□□□□□ -0.36
TPM3-210ENST00000368530 ERBB4Q15303 1308 aa12.81□□□□□ -0.36
TPM3-210ENST00000368530 NEFMP07197 916 aa12.8□□□□□ -0.36
TPM3-210ENST00000368530 PROSER3Q2NL68 480 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms