RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 BAG4O95429 457 aaKnown RBP12.57□□□□□ -0.4
PTPRK-205ENST00000368213 HELBQ8NG08 1087 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-205ENST00000368213 MAST1Q9Y2H9 1570 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 PLCG2P16885 1265 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 SUPT20HQ8NEM7 779 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 SMC2O95347 1197 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 LIG1P18858 919 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 EAPPQ56P03 285 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-205ENST00000368213 SMARCE1Q969G3 411 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 SAMM50Q9Y512 469 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 ASXL1Q8IXJ9 1541 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 TRIM27P14373 513 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 KRT85P78386 507 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 SSRP1Q08945 709 aaKnown RBP12.56□□□□□ -0.4
PTPRK-205ENST00000368213 DPP8Q6V1X1 898 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-205ENST00000368213 SLC4A4Q9Y6R1 1079 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 TCOF1Q13428 1488 aaKnown RBP12.56□□□□□ -0.4
PTPRK-205ENST00000368213 TMEM67Q5HYA8 995 aa12.56□□□□□ -0.4
PTPRK-205ENST00000368213 SBNO1A3KN83 1393 aa12.55□□□□□ -0.4
PTPRK-205ENST00000368213 WDR33Q9C0J8 1336 aaKnown RBP12.55□□□□□ -0.4
PTPRK-205ENST00000368213 CA8P35219 290 aa12.55□□□□□ -0.4
PTPRK-205ENST00000368213 LDHBP07195 334 aaKnown RBP12.55□□□□□ -0.4
PTPRK-205ENST00000368213 HAND2P61296 217 aa12.55□□□□□ -0.4
PTPRK-205ENST00000368213 DHX8Q14562 1220 aaKnown RBP12.55□□□□□ -0.4
PTPRK-205ENST00000368213 JAG2Q9Y219 1238 aa12.55□□□□□ -0.4
PTPRK-205ENST00000368213 ZFYVE9O95405 1425 aa12.55□□□□□ -0.4
PTPRK-205ENST00000368213 ZNF335Q9H4Z2 1342 aaPredicted RBP12.55□□□□□ -0.4
PTPRK-205ENST00000368213 TRAF1Q13077 416 aa12.55□□□□□ -0.4
PTPRK-205ENST00000368213 GGA1Q9UJY5 639 aa12.55□□□□□ -0.4
PTPRK-205ENST00000368213 ZNF790Q6PG37 636 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 NIM1KQ8IY84 436 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 COL17A1Q9UMD9 1497 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-205ENST00000368213 PPP1R12BO60237 982 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-205ENST00000368213 NEBLO76041 1014 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 ARHGAP27Q6ZUM4 889 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 LINS1Q8NG48 757 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 SEPT11Q9NVA2 429 aaKnown RBP12.54□□□□□ -0.4
PTPRK-205ENST00000368213 PIK3C2GO75747 1445 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 B4DLN1 442 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 MRPL12P52815 198 aaKnown RBP12.54□□□□□ -0.4
PTPRK-205ENST00000368213 CCDC178Q5BJE1 867 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 TTLL5Q6EMB2 1281 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 UBA5Q9GZZ9 404 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 ZNHIT6Q9NWK9 470 aaKnown RBP12.54□□□□□ -0.4
PTPRK-205ENST00000368213 LETM1O95202 739 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-205ENST00000368213 PDE6BP35913 854 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 FAM196AQ6ZSG2 479 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 CFAP45Q9UL16 551 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 TRIM37O94972 964 aa12.54□□□□□ -0.4
PTPRK-205ENST00000368213 SH3TC1Q8TE82 1336 aa12.53□□□□□ -0.4
PTPRK-205ENST00000368213 CCDC39Q9UFE4 941 aa12.53□□□□□ -0.4
PTPRK-205ENST00000368213 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
PTPRK-205ENST00000368213 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
PTPRK-205ENST00000368213 EDC4Q6P2E9 1401 aaKnown RBP12.53□□□□□ -0.4
PTPRK-205ENST00000368213 PICK1Q9NRD5 415 aa12.53□□□□□ -0.4
PTPRK-205ENST00000368213 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-205ENST00000368213 HCLS1P14317 486 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-205ENST00000368213 SPATA32Q96LK8 384 aa12.53□□□□□ -0.4
PTPRK-205ENST00000368213 ALDH1B1P30837 517 aa12.52□□□□□ -0.4
PTPRK-205ENST00000368213 CCDC24Q8N4L8 307 aa12.52□□□□□ -0.4
PTPRK-205ENST00000368213 DRC1Q96MC2 740 aa12.52□□□□□ -0.4
PTPRK-205ENST00000368213 ARID3AQ99856 593 aa12.52□□□□□ -0.4
PTPRK-205ENST00000368213 CCDC144CPQ8IYA2 1237 aa12.52□□□□□ -0.4
PTPRK-205ENST00000368213 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.41
PTPRK-205ENST00000368213 PHAXQ9H814 394 aaKnown RBP12.52□□□□□ -0.41
PTPRK-205ENST00000368213 SLC52A2Q9HAB3 445 aa12.52□□□□□ -0.41
PTPRK-205ENST00000368213 MBD3O95983 291 aa12.52□□□□□ -0.41
PTPRK-205ENST00000368213 CWF19L2Q2TBE0 894 aaKnown RBP12.52□□□□□ -0.41
PTPRK-205ENST00000368213 CKAP2LQ8IYA6 745 aa12.52□□□□□ -0.41
PTPRK-205ENST00000368213 C8orf58Q8NAV2 365 aa12.52□□□□□ -0.41
PTPRK-205ENST00000368213 C8orf76Q96K31 380 aa12.52□□□□□ -0.41
PTPRK-205ENST00000368213 K7ELQ4 463 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-205ENST00000368213 SLC9C2Q5TAH2 1124 aa12.51□□□□□ -0.41
PTPRK-205ENST00000368213 NCOA7Q8NI08 942 aa12.51□□□□□ -0.41
PTPRK-205ENST00000368213 RHPN1Q8TCX5 695 aa12.51□□□□□ -0.41
PTPRK-205ENST00000368213 FAM89AQ96GI7 184 aa12.51□□□□□ -0.41
PTPRK-205ENST00000368213 DEF6Q9H4E7 631 aa12.51□□□□□ -0.41
PTPRK-205ENST00000368213 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
PTPRK-205ENST00000368213 DNAJC10Q8IXB1 793 aa12.51□□□□□ -0.41
PTPRK-205ENST00000368213 UGGT1Q9NYU2 1555 aa12.51□□□□□ -0.41
PTPRK-205ENST00000368213 SERPINC1P01008 464 aa12.51□□□□□ -0.41
PTPRK-205ENST00000368213 CAGE1Q8TC20 777 aa12.51□□□□□ -0.41
PTPRK-205ENST00000368213 MAPKBP1O60336 1514 aa12.51□□□□□ -0.41
PTPRK-205ENST00000368213 TCIRG1Q13488 830 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 TRIM5Q9C035 493 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 LUC7LQ9NQ29 371 aaKnown RBP12.5□□□□□ -0.41
PTPRK-205ENST00000368213 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPRK-205ENST00000368213 ESR2Q92731 530 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 KRT23Q9C075 422 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 MCM9Q9NXL9 1143 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 POTEJP0CG39 1038 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 MICU3Q86XE3 530 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 PLBD2Q8NHP8 589 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 TNMDQ9H2S6 317 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 TMOD4Q9NZQ9 345 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 H7C1D1 291 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
PTPRK-205ENST00000368213 PRKG1Q13976 671 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms