RNA–Protein interactions for RNA: ENST00000367094.6

TULP4-201, Transcript of tubby like protein 4, humanhuman

TSL 1 (best) BASIC

Gene TULP4, Length 5,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-201ENST00000367094 ATP2B2Q01814 1243 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 CCDC12Q8WUD4 166 aaPredicted RBP11.79□□□□□ -0.52
TULP4-201ENST00000367094 TMOD2Q9NZR1 351 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 KIF20AO95235 890 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 HOXB7P09629 217 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 NF2P35240 595 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 CCDC178Q5BJE1 867 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 CATIPQ7Z7H3 387 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 SKAP1Q86WV1 359 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 TMX3Q96JJ7 454 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 SBNO2Q9Y2G9 1366 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 GRM8O00222 908 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 LDHCP07864 332 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 FILIP1Q7Z7B0 1213 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 TANGO6Q9C0B7 1094 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 ZMYM3Q14202 1370 aa11.79□□□□□ -0.52
TULP4-201ENST00000367094 SHTN1A0MZ66 631 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 SPTY2D1Q68D10 685 aaPredicted RBP11.78□□□□□ -0.52
TULP4-201ENST00000367094 SAMD1Q6SPF0 538 aaPredicted RBP11.78□□□□□ -0.52
TULP4-201ENST00000367094 LINS1Q8NG48 757 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 TARBP1Q13395 1621 aaKnown RBP11.78□□□□□ -0.52
TULP4-201ENST00000367094 MYO5CQ9NQX4 1742 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 BMP15O95972 392 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 IL15P40933 162 aaPredicted RBP11.78□□□□□ -0.52
TULP4-201ENST00000367094 DZIP1Q86YF9 867 aaKnown RBP11.78□□□□□ -0.52
TULP4-201ENST00000367094 CHPF2Q9P2E5 772 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 TBX22Q9Y458 520 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 RNF123Q5XPI4 1314 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 IFIT3O14879 490 aaKnown RBP11.78□□□□□ -0.52
TULP4-201ENST00000367094 KIF5BP33176 963 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 PTPN14Q15678 1187 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 MICALCLQ6ZW33 695 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 CCDC148Q8NFR7 591 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 MKNK2Q9HBH9 465 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 AOX1Q06278 1338 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 GOLGA6L9A6NEM1 432 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 CEP85Q6P2H3 762 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 UBE3BQ7Z3V4 1068 aa11.78□□□□□ -0.52
TULP4-201ENST00000367094 GOLIM4O00461 696 aa11.77□□□□□ -0.52
TULP4-201ENST00000367094 POLR3DP05423 398 aaPredicted RBP11.77□□□□□ -0.52
TULP4-201ENST00000367094 ARHGAP29Q52LW3 1261 aa11.77□□□□□ -0.52
TULP4-201ENST00000367094 TSG101Q99816 390 aa11.77□□□□□ -0.52
TULP4-201ENST00000367094 PPP1R12BO60237 982 aaPredicted RBP11.77□□□□□ -0.52
TULP4-201ENST00000367094 EIF5P55010 431 aaKnown RBP11.77□□□□□ -0.52
TULP4-201ENST00000367094 CAMK4Q16566 473 aa11.77□□□□□ -0.52
TULP4-201ENST00000367094 LRSAM1Q6UWE0 723 aa11.77□□□□□ -0.52
TULP4-201ENST00000367094 TMTC2Q8N394 836 aa11.77□□□□□ -0.52
TULP4-201ENST00000367094 FSIP1Q8NA03 581 aa11.77□□□□□ -0.52
TULP4-201ENST00000367094 GIMAP7Q8NHV1 300 aa11.77□□□□□ -0.52
TULP4-201ENST00000367094 KIF18AQ8NI77 898 aa11.77□□□□□ -0.52
TULP4-201ENST00000367094 INTS4Q96HW7 963 aaKnown RBP11.77□□□□□ -0.52
TULP4-201ENST00000367094 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.52
TULP4-201ENST00000367094 SBNO1A3KN83 1393 aa11.77□□□□□ -0.53
TULP4-201ENST00000367094 LDHAL6AQ6ZMR3 332 aa11.77□□□□□ -0.53
TULP4-201ENST00000367094 IARSP41252 1262 aaKnown RBP11.77□□□□□ -0.53
TULP4-201ENST00000367094 MTHFSDQ2M296 383 aaKnown RBP11.77□□□□□ -0.53
TULP4-201ENST00000367094 TMEM266Q2M3C6 531 aa11.77□□□□□ -0.53
TULP4-201ENST00000367094 FKBP15Q5T1M5 1219 aa11.77□□□□□ -0.53
TULP4-201ENST00000367094 CNNM2Q9H8M5 875 aa11.77□□□□□ -0.53
TULP4-201ENST00000367094 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
TULP4-201ENST00000367094 MINDY4BA8MYZ0 360 aa11.76□□□□□ -0.53
TULP4-201ENST00000367094 POLR3GO15318 223 aaPredicted RBP11.76□□□□□ -0.53
TULP4-201ENST00000367094 KRT23Q9C075 422 aa11.76□□□□□ -0.53
TULP4-201ENST00000367094 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.76□□□□□ -0.537e-6■■■■□ 21.9
TULP4-201ENST00000367094 TOP1P11387 765 aaKnown RBP11.76□□□□□ -0.53
TULP4-201ENST00000367094 ZNF444Q8N0Y2 327 aaPredicted RBP11.76□□□□□ -0.53
TULP4-201ENST00000367094 CRACR2AQ9BSW2 395 aa11.76□□□□□ -0.53
TULP4-201ENST00000367094 USP16Q9Y5T5 823 aa11.76□□□□□ -0.53
TULP4-201ENST00000367094 SF3B2Q13435 895 aaKnown RBP11.76□□□□□ -0.53
TULP4-201ENST00000367094 TAX1BP1Q86VP1 789 aa11.76□□□□□ -0.53
TULP4-201ENST00000367094 UBXN4Q92575 508 aa11.76□□□□□ -0.53
TULP4-201ENST00000367094 SIRT1Q96EB6 747 aa11.76□□□□□ -0.53
TULP4-201ENST00000367094 MCMDC2Q4G0Z9 681 aa11.76□□□□□ -0.53
TULP4-201ENST00000367094 CNNM3Q8NE01 707 aa11.76□□□□□ -0.53
TULP4-201ENST00000367094 ZCRB1Q8TBF4 217 aaKnown RBP11.76□□□□□ -0.53
TULP4-201ENST00000367094 ZBTB3Q9H5J0 574 aa11.76□□□□□ -0.53
TULP4-201ENST00000367094 NEBLO76041 1014 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 TNIP1Q15025 636 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 SPATA24Q86W54 205 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 MAGI3Q5TCQ9 1506 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 KDM5DQ9BY66 1539 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 CCDC152Q4G0S7 254 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 PPP4R3BQ5MIZ7 849 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 KIAA1328Q86T90 577 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 ABCA8O94911 1581 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 ZNF76P36508 570 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 RBM5P52756 815 aaKnown RBP eCLIP11.75□□□□□ -0.53
TULP4-201ENST00000367094 PDE4BQ07343 736 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 SMC1AQ14683 1233 aaKnown RBP11.75□□□□□ -0.53
TULP4-201ENST00000367094 ORC3Q9UBD5 711 aaPredicted RBP11.75□□□□□ -0.53
TULP4-201ENST00000367094 PTPRTO14522 1441 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 SPATA31E1Q6ZUB1 1445 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 METAP2P50579 478 aaKnown RBP eCLIP11.75□□□□□ -0.53
TULP4-201ENST00000367094 GSTO1P78417 241 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 ZSCAN23Q3MJ62 389 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 TMEM67Q5HYA8 995 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 MFSD6Q6ZSS7 791 aa11.75□□□□□ -0.53
TULP4-201ENST00000367094 CCDC150Q8NCX0 1101 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms