RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 ALDH1L1O75891 902 aa25.6■■□□□ 1.69
CD55-203ENST00000367063 MMP10P09238 476 aa25.6■■□□□ 1.69
CD55-203ENST00000367063 ITPRIPQ8IWB1 547 aa25.6■■□□□ 1.69
CD55-203ENST00000367063 SUSD4Q5VX71 490 aa25.59■■□□□ 1.69
CD55-203ENST00000367063 GCKRQ14397 625 aa25.58■■□□□ 1.69
CD55-203ENST00000367063 PPP1R42Q7Z4L9 355 aa25.58■■□□□ 1.69
CD55-203ENST00000367063 ATF5Q9Y2D1 282 aaPredicted RBP25.58■■□□□ 1.69
CD55-203ENST00000367063 DDR1Q08345 913 aa25.58■■□□□ 1.68
CD55-203ENST00000367063 COG6Q9Y2V7 657 aa25.58■■□□□ 1.68
CD55-203ENST00000367063 COL24A1Q17RW2 1714 aa25.57■■□□□ 1.68
CD55-203ENST00000367063 POLRMTO00411 1230 aaKnown RBP25.57■■□□□ 1.68
CD55-203ENST00000367063 NBPF5PQ86XG9 351 aaPredicted RBP25.57■■□□□ 1.68
CD55-203ENST00000367063 UTP14AQ9BVJ6 771 aaKnown RBP25.57■■□□□ 1.68
CD55-203ENST00000367063 TRMT112Q9UI30 125 aaKnown RBP25.56■■□□□ 1.68
CD55-203ENST00000367063 PARP3Q9Y6F1 533 aa25.56■■□□□ 1.68
CD55-203ENST00000367063 NPHP1O15259 732 aa25.55■■□□□ 1.68
CD55-203ENST00000367063 SERPINB2P05120 415 aa25.55■■□□□ 1.68
CD55-203ENST00000367063 MVPQ14764 893 aaKnown RBP25.55■■□□□ 1.68
CD55-203ENST00000367063 C9orf78Q9NZ63 289 aaPredicted RBP25.55■■□□□ 1.68
CD55-203ENST00000367063 RTL5Q5HYW3 569 aaPredicted RBP25.55■■□□□ 1.68
CD55-203ENST00000367063 TPTE2Q6XPS3 522 aa25.55■■□□□ 1.68
CD55-203ENST00000367063 NYXQ9GZU5 481 aa25.55■■□□□ 1.68
CD55-203ENST00000367063 GRM8O00222 908 aa25.54■■□□□ 1.68
CD55-203ENST00000367063 NTSR2O95665 410 aa25.54■■□□□ 1.68
CD55-203ENST00000367063 GTF2E1P29083 439 aaPredicted RBP25.54■■□□□ 1.68
CD55-203ENST00000367063 ZBTB38Q8NAP3 1195 aaPredicted RBP25.54■■□□□ 1.68
CD55-203ENST00000367063 FAM89AQ96GI7 184 aa25.54■■□□□ 1.68
CD55-203ENST00000367063 JARID2Q92833 1246 aaPredicted RBP25.53■■□□□ 1.68
CD55-203ENST00000367063 IBTKQ9P2D0 1353 aaPredicted RBP25.52■■□□□ 1.68
CD55-203ENST00000367063 POLD1P28340 1107 aa25.52■■□□□ 1.68
CD55-203ENST00000367063 UBE3BQ7Z3V4 1068 aa25.52■■□□□ 1.68
CD55-203ENST00000367063 NUTM1Q86Y26 1132 aa25.52■■□□□ 1.68
CD55-203ENST00000367063 CNBD1Q8NA66 436 aa25.52■■□□□ 1.68
CD55-203ENST00000367063 USP44Q9H0E7 712 aa25.52■■□□□ 1.68
CD55-203ENST00000367063 PCCAP05165 728 aaPredicted RBP25.52■■□□□ 1.68
CD55-203ENST00000367063 IRX6P78412 446 aaPredicted RBP25.52■■□□□ 1.68
CD55-203ENST00000367063 DDX19BQ9UMR2 479 aa25.52■■□□□ 1.68
CD55-203ENST00000367063 SH3TC1Q8TE82 1336 aa25.51■■□□□ 1.67
CD55-203ENST00000367063 H7C1W4 665 aa25.51■■□□□ 1.67
CD55-203ENST00000367063 NBPF7P0C2Y1 421 aaPredicted RBP25.5■■□□□ 1.67
CD55-203ENST00000367063 SYNE4Q8N205 404 aa25.5■■□□□ 1.67
CD55-203ENST00000367063 CRBNQ96SW2 442 aa25.5■■□□□ 1.67
CD55-203ENST00000367063 MEIS3Q99687 375 aa25.5■■□□□ 1.67
CD55-203ENST00000367063 ERFEQ4G0M1 354 aa25.49■■□□□ 1.67
CD55-203ENST00000367063 PRR5LQ6MZQ0 368 aa25.49■■□□□ 1.67
CD55-203ENST00000367063 CCDC24Q8N4L8 307 aa25.49■■□□□ 1.67
CD55-203ENST00000367063 SPON1Q9HCB6 807 aa25.49■■□□□ 1.67
CD55-203ENST00000367063 ZBTB7BO15156 539 aaPredicted RBP25.48■■□□□ 1.67
CD55-203ENST00000367063 UTYO14607 1347 aa25.48■■□□□ 1.67
CD55-203ENST00000367063 NRXN2Q9P2S2 1712 aa25.48■■□□□ 1.67
CD55-203ENST00000367063 ST5P78524 1137 aa25.48■■□□□ 1.67
CD55-203ENST00000367063 GNAI3P08754 354 aa25.47■■□□□ 1.67
CD55-203ENST00000367063 UBTFL1P0CB47 393 aaPredicted RBP25.47■■□□□ 1.67
CD55-203ENST00000367063 SGIP1Q9BQI5 828 aa25.47■■□□□ 1.67
CD55-203ENST00000367063 IRS4O14654 1257 aaPredicted RBP25.46■■□□□ 1.67
CD55-203ENST00000367063 PTGER2P43116 358 aa25.46■■□□□ 1.67
CD55-203ENST00000367063 CASP7P55210 303 aa25.46■■□□□ 1.67
CD55-203ENST00000367063 ABCC12Q96J65 1359 aa25.46■■□□□ 1.67
CD55-203ENST00000367063 CHMP4BQ9H444 224 aaKnown RBP25.45■■□□□ 1.67
CD55-203ENST00000367063 CDHR2Q9BYE9 1310 aa25.45■■□□□ 1.67
CD55-203ENST00000367063 HCLS1P14317 486 aaPredicted RBP25.45■■□□□ 1.66
CD55-203ENST00000367063 GTF3C3Q9Y5Q9 886 aa25.45■■□□□ 1.66
CD55-203ENST00000367063 SUCLG2Q96I99 432 aa25.43■■□□□ 1.66
CD55-203ENST00000367063 HSP90B1P14625 803 aaKnown RBP25.42■■□□□ 1.66
CD55-203ENST00000367063 SLC10A5Q5PT55 438 aa25.42■■□□□ 1.66
CD55-203ENST00000367063 HDAC5Q9UQL6 1122 aa25.42■■□□□ 1.66
CD55-203ENST00000367063 DDX60Q8IY21 1712 aaKnown RBP25.42■■□□□ 1.66
CD55-203ENST00000367063 NEFLP07196 543 aa25.42■■□□□ 1.66
CD55-203ENST00000367063 PDE8AO60658 829 aa25.41■■□□□ 1.66
CD55-203ENST00000367063 GNAI2P04899 355 aa25.41■■□□□ 1.66
CD55-203ENST00000367063 EXOC6Q8TAG9 804 aa25.41■■□□□ 1.66
CD55-203ENST00000367063 ZBTB40Q9NUA8 1239 aa25.41■■□□□ 1.66
CD55-203ENST00000367063 LRRFIP2Q9Y608 721 aaKnown RBP25.41■■□□□ 1.66
CD55-203ENST00000367063 LAMB2P55268 1798 aa25.41■■□□□ 1.66
CD55-203ENST00000367063 BRIP1Q9BX63 1249 aa25.4■■□□□ 1.66
CD55-203ENST00000367063 C1orf115Q9H7X2 142 aa25.4■■□□□ 1.66
CD55-203ENST00000367063 KAZALD1Q96I82 304 aa25.39■■□□□ 1.66
CD55-203ENST00000367063 NLRP3Q96P20 1036 aa25.39■■□□□ 1.66
CD55-203ENST00000367063 PLA2G12BQ9BX93 195 aa25.39■■□□□ 1.66
CD55-203ENST00000367063 BICC1Q9H694 974 aaKnown RBP25.39■■□□□ 1.65
CD55-203ENST00000367063 TNRC6CQ9HCJ0 1690 aaKnown RBP25.38■■□□□ 1.65
CD55-203ENST00000367063 MYH3P11055 1940 aa25.38■■□□□ 1.65
CD55-203ENST00000367063 ANKRD31Q8N7Z5 1873 aa25.38■■□□□ 1.65
CD55-203ENST00000367063 FOXO4P98177 505 aa25.38■■□□□ 1.65
CD55-203ENST00000367063 EPHA10Q5JZY3 1008 aa25.38■■□□□ 1.65
CD55-203ENST00000367063 RIC1Q4ADV7 1423 aa25.38■■□□□ 1.65
CD55-203ENST00000367063 C10orf71Q711Q0 1435 aa25.38■■□□□ 1.65
CD55-203ENST00000367063 CTSWP56202 376 aa25.37■■□□□ 1.65
CD55-203ENST00000367063 C3orf67Q6ZVT6 689 aa25.37■■□□□ 1.65
CD55-203ENST00000367063 PPP1R1BQ9UD71 204 aaPredicted RBP25.37■■□□□ 1.65
CD55-203ENST00000367063 PDE6BP35913 854 aa25.36■■□□□ 1.65
CD55-203ENST00000367063 KLHL34Q8N239 644 aa25.36■■□□□ 1.65
CD55-203ENST00000367063 CCDC85AQ96PX6 553 aaPredicted RBP25.36■■□□□ 1.65
CD55-203ENST00000367063 LMBR1LQ6UX01 489 aa25.35■■□□□ 1.65
CD55-203ENST00000367063 CHMP3Q9Y3E7 222 aa25.35■■□□□ 1.65
CD55-203ENST00000367063 ANKRD44Q8N8A2 993 aa25.34■■□□□ 1.65
CD55-203ENST00000367063 TTLL11Q8NHH1 800 aa25.34■■□□□ 1.65
CD55-203ENST00000367063 KIF13BQ9NQT8 1826 aa25.33■■□□□ 1.65
CD55-203ENST00000367063 SF3B3Q15393 1217 aaKnown RBP25.33■■□□□ 1.65
CD55-203ENST00000367063 RABL6Q3YEC7 729 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms