RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 PLEKHF1Q96S99 279 aa10.77□□□□□ -0.69
MRPL55-211ENST00000366738 BEGAINQ9BUH8 593 aa10.77□□□□□ -0.69
MRPL55-211ENST00000366738 FZD9O00144 591 aa10.76□□□□□ -0.69
MRPL55-211ENST00000366738 AOC2O75106 756 aa10.76□□□□□ -0.69
MRPL55-211ENST00000366738 NPR1P16066 1061 aa10.76□□□□□ -0.69
MRPL55-211ENST00000366738 IARSP41252 1262 aaKnown RBP10.76□□□□□ -0.69
MRPL55-211ENST00000366738 NBPF5PQ86XG9 351 aaPredicted RBP10.76□□□□□ -0.69
MRPL55-211ENST00000366738 GPR101Q96P66 508 aaPredicted RBP10.76□□□□□ -0.69
MRPL55-211ENST00000366738 CASP8AP2Q9UKL3 1982 aa10.76□□□□□ -0.69
MRPL55-211ENST00000366738 TRPM7Q96QT4 1865 aa10.75□□□□□ -0.69
MRPL55-211ENST00000366738 NBPF26B4DH59 902 aa10.75□□□□□ -0.69
MRPL55-211ENST00000366738 TRAF5O00463 557 aa10.75□□□□□ -0.69
MRPL55-211ENST00000366738 NBPF10Q6P3W6 841 aaKnown RBP10.75□□□□□ -0.69
MRPL55-211ENST00000366738 DZIP3Q86Y13 1208 aaKnown RBP10.75□□□□□ -0.69
MRPL55-211ENST00000366738 GPC2Q8N158 579 aa10.75□□□□□ -0.69
MRPL55-211ENST00000366738 SYNE4Q8N205 404 aa10.75□□□□□ -0.69
MRPL55-211ENST00000366738 NBPF15Q8N660 670 aa10.75□□□□□ -0.69
MRPL55-211ENST00000366738 TEX13AQ9BXU3 409 aaPredicted RBP10.75□□□□□ -0.69
MRPL55-211ENST00000366738 MCOLN1Q9GZU1 580 aa10.75□□□□□ -0.69
MRPL55-211ENST00000366738 GJA3Q9Y6H8 435 aa10.75□□□□□ -0.69
MRPL55-211ENST00000366738 SNED1Q8TER0 1413 aa10.75□□□□□ -0.69
MRPL55-211ENST00000366738 ECE1P42892 770 aa10.74□□□□□ -0.69
MRPL55-211ENST00000366738 MIS18AQ9NYP9 233 aa10.74□□□□□ -0.69
MRPL55-211ENST00000366738 DLG5Q8TDM6 1919 aa10.74□□□□□ -0.69
MRPL55-211ENST00000366738 FAM177BA6PVY3 158 aa10.73□□□□□ -0.69
MRPL55-211ENST00000366738 EPS15P42566 896 aa10.73□□□□□ -0.69
MRPL55-211ENST00000366738 CST9Q5W186 159 aa10.73□□□□□ -0.69
MRPL55-211ENST00000366738 NPM2Q86SE8 214 aaKnown RBP10.73□□□□□ -0.69
MRPL55-211ENST00000366738 SLC51AQ86UW1 340 aa10.73□□□□□ -0.69
MRPL55-211ENST00000366738 RTKN2Q8IZC4 609 aa10.73□□□□□ -0.69
MRPL55-211ENST00000366738 RUNDC1Q96C34 613 aa10.73□□□□□ -0.69
MRPL55-211ENST00000366738 KLRG2A4D1S0 409 aaPredicted RBP10.72□□□□□ -0.69
MRPL55-211ENST00000366738 SNRPA1P09661 255 aaKnown RBP10.72□□□□□ -0.69
MRPL55-211ENST00000366738 LMOD1P29536 600 aaPredicted RBP10.72□□□□□ -0.69
MRPL55-211ENST00000366738 SCNN1DP51172 638 aa10.72□□□□□ -0.69
MRPL55-211ENST00000366738 JDP2Q8WYK2 163 aa10.72□□□□□ -0.69
MRPL55-211ENST00000366738 RRP7AQ9Y3A4 280 aaKnown RBP10.72□□□□□ -0.69
MRPL55-211ENST00000366738 TLL2Q9Y6L7 1015 aa10.72□□□□□ -0.69
MRPL55-211ENST00000366738 MAPK8IP3Q9UPT6 1336 aa10.72□□□□□ -0.69
MRPL55-211ENST00000366738 APAF1O14727 1248 aa10.71□□□□□ -0.69
MRPL55-211ENST00000366738 HTATSF1O43719 755 aaKnown RBP10.71□□□□□ -0.69
MRPL55-211ENST00000366738 EIF6P56537 245 aaKnown RBP10.71□□□□□ -0.69
MRPL55-211ENST00000366738 DGKZQ13574 1117 aa10.71□□□□□ -0.69
MRPL55-211ENST00000366738 HLFQ16534 295 aa10.71□□□□□ -0.69
MRPL55-211ENST00000366738 KDM3BQ7LBC6 1761 aa10.71□□□□□ -0.69
MRPL55-211ENST00000366738 RTF1Q92541 710 aaKnown RBP10.71□□□□□ -0.69
MRPL55-211ENST00000366738 THUMPD2Q9BTF0 503 aaKnown RBP10.71□□□□□ -0.69
MRPL55-211ENST00000366738 LAMB4A4D0S4 1761 aa10.7□□□□□ -0.7
MRPL55-211ENST00000366738 ABCC12Q96J65 1359 aa10.7□□□□□ -0.7
MRPL55-211ENST00000366738 TAF7Q15545 349 aaPredicted RBP10.7□□□□□ -0.7
MRPL55-211ENST00000366738 YTHDC1Q96MU7 727 aaKnown RBP10.7□□□□□ -0.7
MRPL55-211ENST00000366738 PSMD1Q99460 953 aa10.7□□□□□ -0.7
MRPL55-211ENST00000366738 NIP7Q9Y221 180 aaKnown RBP eCLIP10.7□□□□□ -0.7
MRPL55-211ENST00000366738 CELF2O95319 508 aaKnown RBP10.69□□□□□ -0.7
MRPL55-211ENST00000366738 MAP2K2P36507 400 aa10.69□□□□□ -0.7
MRPL55-211ENST00000366738 TMPOP42166 694 aaKnown RBP10.69□□□□□ -0.7
MRPL55-211ENST00000366738 NEUROD2Q15784 382 aa10.69□□□□□ -0.7
MRPL55-211ENST00000366738 NFE2L2Q16236 605 aa10.69□□□□□ -0.7
MRPL55-211ENST00000366738 CLEC4GQ6UXB4 293 aa10.69□□□□□ -0.7
MRPL55-211ENST00000366738 TPTE2Q6XPS3 522 aa10.69□□□□□ -0.7
MRPL55-211ENST00000366738 SAPCD2Q86UD0 394 aa10.69□□□□□ -0.7
MRPL55-211ENST00000366738 LARGE2Q8N3Y3 721 aa10.69□□□□□ -0.7
MRPL55-211ENST00000366738 ZNF652Q9Y2D9 606 aa10.69□□□□□ -0.7
MRPL55-211ENST00000366738 SALL2Q9Y467 1007 aaPredicted RBP10.69□□□□□ -0.7
MRPL55-211ENST00000366738 CA12O43570 354 aa10.68□□□□□ -0.7
MRPL55-211ENST00000366738 ALDH1B1P30837 517 aa10.68□□□□□ -0.7
MRPL55-211ENST00000366738 SOX10P56693 466 aa10.68□□□□□ -0.7
MRPL55-211ENST00000366738 HNRNPUQ00839 825 aaKnown RBP eCLIP10.68□□□□□ -0.7
MRPL55-211ENST00000366738 CIAPIN1Q6FI81 312 aa10.68□□□□□ -0.7
MRPL55-211ENST00000366738 USP50Q70EL3 339 aaPredicted RBP10.68□□□□□ -0.7
MRPL55-211ENST00000366738 ZIC5Q96T25 663 aa10.68□□□□□ -0.7
MRPL55-211ENST00000366738 GLIS2Q9BZE0 524 aaPredicted RBP10.68□□□□□ -0.7
MRPL55-211ENST00000366738 PNNQ9H307 717 aaKnown RBP10.68□□□□□ -0.7
MRPL55-211ENST00000366738 BRPF1P55201 1214 aaPredicted RBP10.67□□□□□ -0.7
MRPL55-211ENST00000366738 RIPK4P57078 832 aa10.67□□□□□ -0.7
MRPL55-211ENST00000366738 EIF4A1P60842 406 aaKnown RBP10.67□□□□□ -0.7
MRPL55-211ENST00000366738 TTLL7Q6ZT98 887 aa10.67□□□□□ -0.7
MRPL55-211ENST00000366738 NUTM1Q86Y26 1132 aa10.67□□□□□ -0.7
MRPL55-211ENST00000366738 ZNF408Q9H9D4 720 aa10.67□□□□□ -0.7
MRPL55-211ENST00000366738 TRIM35Q9UPQ4 493 aa10.67□□□□□ -0.7
MRPL55-211ENST00000366738 TCERG1O14776 1098 aaKnown RBP10.66□□□□□ -0.7
MRPL55-211ENST00000366738 NEFMP07197 916 aa10.66□□□□□ -0.7
MRPL55-211ENST00000366738 GTF2E1P29083 439 aaPredicted RBP10.66□□□□□ -0.7
MRPL55-211ENST00000366738 CRY2Q49AN0 593 aa10.66□□□□□ -0.7
MRPL55-211ENST00000366738 NGEFQ8N5V2 710 aa10.66□□□□□ -0.7
MRPL55-211ENST00000366738 GPRC5DQ9NZD1 345 aa10.66□□□□□ -0.7
MRPL55-211ENST00000366738 UBN2Q6ZU65 1347 aa10.65□□□□□ -0.7
MRPL55-211ENST00000366738 ZNF521Q96K83 1311 aa10.65□□□□□ -0.7
MRPL55-211ENST00000366738 RGL2O15211 777 aa10.65□□□□□ -0.7
MRPL55-211ENST00000366738 LRP10Q7Z4F1 713 aa10.65□□□□□ -0.7
MRPL55-211ENST00000366738 NIM1KQ8IY84 436 aa10.65□□□□□ -0.7
MRPL55-211ENST00000366738 ADARB2Q9NS39 739 aaKnown RBP10.65□□□□□ -0.7
MRPL55-211ENST00000366738 RIC1Q4ADV7 1423 aa10.65□□□□□ -0.7
MRPL55-211ENST00000366738 NUP98P52948 1817 aa10.65□□□□□ -0.71
MRPL55-211ENST00000366738 PPEF1O14829 653 aaPredicted RBP10.64□□□□□ -0.71
MRPL55-211ENST00000366738 PPIP5K2O43314 1243 aa10.64□□□□□ -0.71
MRPL55-211ENST00000366738 MYL6BP14649 208 aa10.64□□□□□ -0.71
MRPL55-211ENST00000366738 GMPSP49915 693 aaPredicted RBP10.64□□□□□ -0.71
MRPL55-211ENST00000366738 AOC3Q16853 763 aa10.64□□□□□ -0.71
MRPL55-211ENST00000366738 CC2D2BQ6DHV5 1058 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms