RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.32■■□□□ 1.32
TRIM58-201ENST00000366481 V9GYY5 206 aaPredicted RBP23.32■■□□□ 1.32
TRIM58-201ENST00000366481 AP5Z1O43299 807 aa23.32■■□□□ 1.32
TRIM58-201ENST00000366481 CKAP2LQ8IYA6 745 aa23.32■■□□□ 1.32
TRIM58-201ENST00000366481 IP6K1Q92551 441 aa23.32■■□□□ 1.32
TRIM58-201ENST00000366481 FEZ1Q99689 392 aa23.32■■□□□ 1.32
TRIM58-201ENST00000366481 PDE4CQ08493 712 aa23.31■■□□□ 1.32
TRIM58-201ENST00000366481 DDX17Q92841 729 aaKnown RBP23.31■■□□□ 1.32
TRIM58-201ENST00000366481 RAD50Q92878 1312 aa23.31■■□□□ 1.32
TRIM58-201ENST00000366481 IFIT2P09913 472 aaKnown RBP23.31■■□□□ 1.32
TRIM58-201ENST00000366481 FERMT3Q86UX7 667 aa23.31■■□□□ 1.32
TRIM58-201ENST00000366481 LUZP1Q86V48 1076 aa23.31■■□□□ 1.32
TRIM58-201ENST00000366481 CLASRPQ8N2M8 674 aaKnown RBP23.31■■□□□ 1.32
TRIM58-201ENST00000366481 FAM227BQ96M60 508 aa23.31■■□□□ 1.32
TRIM58-201ENST00000366481 FAM173BQ6P4H8 233 aa23.31■■□□□ 1.32
TRIM58-201ENST00000366481 EDC3Q96F86 508 aaKnown RBP23.31■■□□□ 1.32
TRIM58-201ENST00000366481 TLR7Q9NYK1 1049 aaKnown RBP23.31■■□□□ 1.32
TRIM58-201ENST00000366481 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.3■■□□□ 1.32
TRIM58-201ENST00000366481 RAB11FIP3O75154 756 aa23.3■■□□□ 1.32
TRIM58-201ENST00000366481 PIK3C2AO00443 1686 aa23.3■■□□□ 1.32
TRIM58-201ENST00000366481 NCBP1Q09161 790 aaKnown RBP23.29■■□□□ 1.32
TRIM58-201ENST00000366481 BOLA2Q9H3K6 86 aa23.29■■□□□ 1.32
TRIM58-201ENST00000366481 ZC3H6P61129 1189 aaKnown RBP23.29■■□□□ 1.32
TRIM58-201ENST00000366481 C1orf141Q5JVX7 400 aa23.29■■□□□ 1.32
TRIM58-201ENST00000366481 ADCY9O60503 1353 aa23.29■■□□□ 1.32
TRIM58-201ENST00000366481 F13A1P00488 732 aa23.28■■□□□ 1.32
TRIM58-201ENST00000366481 ANKRD7Q92527 254 aa23.28■■□□□ 1.32
TRIM58-201ENST00000366481 CHGBP05060 677 aa23.28■■□□□ 1.32
TRIM58-201ENST00000366481 GTF2E1P29083 439 aaPredicted RBP23.28■■□□□ 1.32
TRIM58-201ENST00000366481 ANKLE2Q86XL3 938 aa23.27■■□□□ 1.32
TRIM58-201ENST00000366481 TAF6LQ9Y6J9 622 aa23.27■■□□□ 1.32
TRIM58-201ENST00000366481 TOPAZ1Q8N9V7 1692 aa23.27■■□□□ 1.32
TRIM58-201ENST00000366481 TAF3Q5VWG9 929 aa23.27■■□□□ 1.32
TRIM58-201ENST00000366481 NRBP1Q9UHY1 535 aa23.27■■□□□ 1.32
TRIM58-201ENST00000366481 AXIN2Q9Y2T1 843 aa23.27■■□□□ 1.32
TRIM58-201ENST00000366481 RPAP1Q9BWH6 1393 aaPredicted RBP23.26■■□□□ 1.31
TRIM58-201ENST00000366481 SUCLG2Q96I99 432 aa23.26■■□□□ 1.31
TRIM58-201ENST00000366481 TRERF1Q96PN7 1200 aa23.26■■□□□ 1.31
TRIM58-201ENST00000366481 LIMCH1Q9UPQ0 1083 aa23.26■■□□□ 1.31
TRIM58-201ENST00000366481 GJB2P29033 226 aa23.25■■□□□ 1.31
TRIM58-201ENST00000366481 STK3Q13188 491 aa23.25■■□□□ 1.31
TRIM58-201ENST00000366481 NALCNQ8IZF0 1738 aa23.25■■□□□ 1.31
TRIM58-201ENST00000366481 KIF13AQ9H1H9 1805 aa23.25■■□□□ 1.31
TRIM58-201ENST00000366481 BICC1Q9H694 974 aaKnown RBP23.25■■□□□ 1.31
TRIM58-201ENST00000366481 DBF4Q9UBU7 674 aaPredicted RBP23.25■■□□□ 1.31
TRIM58-201ENST00000366481 NWD1Q149M9 1564 aa23.25■■□□□ 1.31
TRIM58-201ENST00000366481 GLRX3O76003 335 aaKnown RBP23.25■■□□□ 1.31
TRIM58-201ENST00000366481 TTC14Q96N46 770 aa23.25■■□□□ 1.31
TRIM58-201ENST00000366481 PDRG1Q9NUG6 133 aa23.25■■□□□ 1.31
TRIM58-201ENST00000366481 RNMTO43148 476 aaKnown RBP23.24■■□□□ 1.31
TRIM58-201ENST00000366481 MAP3K11Q16584 847 aa23.24■■□□□ 1.31
TRIM58-201ENST00000366481 PLEKHO1Q53GL0 409 aaPredicted RBP23.24■■□□□ 1.31
TRIM58-201ENST00000366481 NUP62CLQ9H1M0 184 aa23.24■■□□□ 1.31
TRIM58-201ENST00000366481 PPFIA3O75145 1194 aa23.24■■□□□ 1.31
TRIM58-201ENST00000366481 GCP02774 474 aa23.24■■□□□ 1.31
TRIM58-201ENST00000366481 EAF2Q96CJ1 260 aaPredicted RBP23.24■■□□□ 1.31
TRIM58-201ENST00000366481 ECHDC1Q9NTX5 307 aa23.24■■□□□ 1.31
TRIM58-201ENST00000366481 GIGYF1O75420 1035 aaPredicted RBP23.23■■□□□ 1.31
TRIM58-201ENST00000366481 FAM200AQ8TCP9 573 aa23.23■■□□□ 1.31
TRIM58-201ENST00000366481 ANKRD24Q8TF21 1146 aa23.23■■□□□ 1.31
TRIM58-201ENST00000366481 TNMDQ9H2S6 317 aa23.23■■□□□ 1.31
TRIM58-201ENST00000366481 SMTNL1A8MU46 457 aa23.22■■□□□ 1.31
TRIM58-201ENST00000366481 CEMIPQ8WUJ3 1361 aa23.22■■□□□ 1.31
TRIM58-201ENST00000366481 AKAP4Q5JQC9 854 aa23.22■■□□□ 1.31
TRIM58-201ENST00000366481 FMN2Q9NZ56 1722 aa23.22■■□□□ 1.31
TRIM58-201ENST00000366481 CTIFO43310 598 aaKnown RBP23.21■■□□□ 1.31
TRIM58-201ENST00000366481 NMIQ13287 307 aaPredicted RBP23.21■■□□□ 1.31
TRIM58-201ENST00000366481 HYPKQ9NX55 129 aa23.21■■□□□ 1.31
TRIM58-201ENST00000366481 CTNNA3Q9UI47 895 aa23.21■■□□□ 1.31
TRIM58-201ENST00000366481 ANO6Q4KMQ2 910 aa23.21■■□□□ 1.31
TRIM58-201ENST00000366481 RIC3Q7Z5B4 369 aa23.21■■□□□ 1.31
TRIM58-201ENST00000366481 CCDC66A2RUB6 948 aa23.21■■□□□ 1.31
TRIM58-201ENST00000366481 SASH1O94885 1247 aa23.21■■□□□ 1.31
TRIM58-201ENST00000366481 TYRO3Q06418 890 aa23.21■■□□□ 1.31
TRIM58-201ENST00000366481 ME3Q16798 604 aa23.21■■□□□ 1.31
TRIM58-201ENST00000366481 PLCD3Q8N3E9 789 aa23.21■■□□□ 1.31
TRIM58-201ENST00000366481 RBM8AQ9Y5S9 174 aaKnown RBP23.21■■□□□ 1.31
TRIM58-201ENST00000366481 KAZALD1Q96I82 304 aa23.2■■□□□ 1.3
TRIM58-201ENST00000366481 TCHHQ07283 1943 aa23.2■■□□□ 1.3
TRIM58-201ENST00000366481 G3BP1Q13283 466 aaKnown RBP eCLIP23.2■■□□□ 1.3
TRIM58-201ENST00000366481 FSD1Q9BTV5 496 aa23.2■■□□□ 1.3
TRIM58-201ENST00000366481 XRN1Q8IZH2 1706 aaKnown RBP23.2■■□□□ 1.3
TRIM58-201ENST00000366481 FOSBP53539 338 aa23.2■■□□□ 1.3
TRIM58-201ENST00000366481 KSR2Q6VAB6 950 aa23.2■■□□□ 1.3
TRIM58-201ENST00000366481 TRMT1Q9NXH9 659 aaKnown RBP23.2■■□□□ 1.3
TRIM58-201ENST00000366481 TFIP11Q9UBB9 837 aaKnown RBP23.2■■□□□ 1.3
TRIM58-201ENST00000366481 A0A0D9SFI3 127 aa23.19■■□□□ 1.3
TRIM58-201ENST00000366481 PROSER2Q86WR7 435 aaPredicted RBP23.19■■□□□ 1.3
TRIM58-201ENST00000366481 TMEM87AQ8NBN3 555 aa23.19■■□□□ 1.3
TRIM58-201ENST00000366481 CLIP2Q9UDT6 1046 aa23.19■■□□□ 1.3
TRIM58-201ENST00000366481 AOX1Q06278 1338 aa23.19■■□□□ 1.3
TRIM58-201ENST00000366481 NAP1L2Q9ULW6 460 aaPredicted RBP23.19■■□□□ 1.3
TRIM58-201ENST00000366481 CYP46A1Q9Y6A2 500 aa23.19■■□□□ 1.3
TRIM58-201ENST00000366481 PXDNQ92626 1479 aa23.18■■□□□ 1.3
TRIM58-201ENST00000366481 HSPA2P54652 639 aa23.18■■□□□ 1.3
TRIM58-201ENST00000366481 HSP90AB4PQ58FF6 505 aa23.18■■□□□ 1.3
TRIM58-201ENST00000366481 CEP135Q66GS9 1140 aa23.18■■□□□ 1.3
TRIM58-201ENST00000366481 KRT222Q8N1A0 295 aa23.18■■□□□ 1.3
TRIM58-201ENST00000366481 GABPB1Q06547 395 aaPredicted RBP23.18■■□□□ 1.3
TRIM58-201ENST00000366481 ST3GAL1Q11201 340 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms