RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 GMCL1Q96IK5 515 aa7.65□□□□□ -1.18
RNU6-560P-201ENST00000364007 BRD7Q9NPI1 651 aa7.65□□□□□ -1.18
RNU6-560P-201ENST00000364007 POLIQ9UNA4 740 aa7.65□□□□□ -1.18
RNU6-560P-201ENST00000364007 RTCBQ9Y3I0 505 aaKnown RBP7.65□□□□□ -1.18
RNU6-560P-201ENST00000364007 EFSO43281 561 aa7.64□□□□□ -1.19
RNU6-560P-201ENST00000364007 CCDC27Q2M243 656 aa7.64□□□□□ -1.19
RNU6-560P-201ENST00000364007 CMTR1Q8N1G2 835 aaKnown RBP7.64□□□□□ -1.19
RNU6-560P-201ENST00000364007 NUDT16Q96DE0 195 aaKnown RBP7.64□□□□□ -1.19
RNU6-560P-201ENST00000364007 PDGFAP04085 211 aa7.63□□□□□ -1.19
RNU6-560P-201ENST00000364007 FAM157BP0CG42 384 aa7.63□□□□□ -1.19
RNU6-560P-201ENST00000364007 MAPK1P28482 360 aa7.63□□□□□ -1.19
RNU6-560P-201ENST00000364007 MZF1P28698 734 aaPredicted RBP7.63□□□□□ -1.19
RNU6-560P-201ENST00000364007 MFAP1P55081 439 aaKnown RBP7.63□□□□□ -1.19
RNU6-560P-201ENST00000364007 MARSP56192 900 aaKnown RBP7.63□□□□□ -1.19
RNU6-560P-201ENST00000364007 GGNBP2Q9H3C7 697 aa7.63□□□□□ -1.19
RNU6-560P-201ENST00000364007 KCNMB2Q9Y691 235 aa7.63□□□□□ -1.19
RNU6-560P-201ENST00000364007 A6NHS1 94 aa7.62□□□□□ -1.19
RNU6-560P-201ENST00000364007 H3BM21 787 aa7.62□□□□□ -1.19
RNU6-560P-201ENST00000364007 TERTO14746 1132 aaKnown RBP7.62□□□□□ -1.19
RNU6-560P-201ENST00000364007 CD33P20138 364 aa7.62□□□□□ -1.19
RNU6-560P-201ENST00000364007 CTBSQ01459 385 aa7.62□□□□□ -1.19
RNU6-560P-201ENST00000364007 PIK3R5Q8WYR1 880 aa7.62□□□□□ -1.19
RNU6-560P-201ENST00000364007 DCTN4Q9UJW0 460 aa7.62□□□□□ -1.19
RNU6-560P-201ENST00000364007 BRPF3Q9ULD4 1205 aa7.62□□□□□ -1.19
RNU6-560P-201ENST00000364007 KCNH4Q9UQ05 1017 aa7.62□□□□□ -1.19
RNU6-560P-201ENST00000364007 ERBB4Q15303 1308 aa7.61□□□□□ -1.19
RNU6-560P-201ENST00000364007 ATXN7L1Q9ULK2 861 aaPredicted RBP7.61□□□□□ -1.19
RNU6-560P-201ENST00000364007 NDUFB5O43674 189 aa7.6□□□□□ -1.19
RNU6-560P-201ENST00000364007 FGFR3P22607 806 aa7.6□□□□□ -1.19
RNU6-560P-201ENST00000364007 KCNQ4P56696 695 aa7.6□□□□□ -1.19
RNU6-560P-201ENST00000364007 TRIP4Q15650 581 aaPredicted RBP7.6□□□□□ -1.19
RNU6-560P-201ENST00000364007 C8orf34Q49A92 452 aa7.6□□□□□ -1.19
RNU6-560P-201ENST00000364007 FOXR1Q6PIV2 292 aa7.6□□□□□ -1.19
RNU6-560P-201ENST00000364007 NPAS3Q8IXF0 933 aa7.6□□□□□ -1.19
RNU6-560P-201ENST00000364007 TRERF1Q96PN7 1200 aa7.6□□□□□ -1.19
RNU6-560P-201ENST00000364007 CFHR5Q9BXR6 569 aa7.6□□□□□ -1.19
RNU6-560P-201ENST00000364007 FAM13BQ9NYF5 915 aa7.6□□□□□ -1.19
RNU6-560P-201ENST00000364007 MARK1Q9P0L2 795 aa7.6□□□□□ -1.19
RNU6-560P-201ENST00000364007 EPB42P16452 691 aa7.59□□□□□ -1.19
RNU6-560P-201ENST00000364007 GAS6Q14393 721 aa7.59□□□□□ -1.19
RNU6-560P-201ENST00000364007 DNAJC14Q6Y2X3 702 aaPredicted RBP7.59□□□□□ -1.19
RNU6-560P-201ENST00000364007 SLC30A3Q99726 388 aa7.59□□□□□ -1.19
RNU6-560P-201ENST00000364007 UBAP1LF5GYI3 381 aa7.58□□□□□ -1.2
RNU6-560P-201ENST00000364007 XYLBO75191 536 aa7.58□□□□□ -1.2
RNU6-560P-201ENST00000364007 SASH3O75995 380 aa7.58□□□□□ -1.2
RNU6-560P-201ENST00000364007 NFX1Q12986 1120 aaKnown RBP7.58□□□□□ -1.2
RNU6-560P-201ENST00000364007 LAMC2Q13753 1193 aa7.58□□□□□ -1.2
RNU6-560P-201ENST00000364007 KRT25Q7Z3Z0 450 aa7.58□□□□□ -1.2
RNU6-560P-201ENST00000364007 TMC7Q7Z402 723 aa7.58□□□□□ -1.2
RNU6-560P-201ENST00000364007 TMC1Q8TDI8 760 aa7.58□□□□□ -1.2
RNU6-560P-201ENST00000364007 RBCK1Q9BYM8 510 aa7.58□□□□□ -1.2
RNU6-560P-201ENST00000364007 GSX2Q9BZM3 304 aa7.58□□□□□ -1.2
RNU6-560P-201ENST00000364007 PHF24Q9UPV7 400 aa7.58□□□□□ -1.2
RNU6-560P-201ENST00000364007 C2CD2LO14523 706 aa7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 IGHA2P01877 340 aa7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 PCSK2P16519 638 aa7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 TARSP26639 723 aaKnown RBP7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 RNFT1Q5M7Z0 435 aa7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 RAB44Q7Z6P3 723 aaPredicted RBP7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 GJD3Q8N144 294 aa7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 SLC16A10Q8TF71 515 aa7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 ZNF775Q96BV0 537 aaPredicted RBP7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 ASB16Q96NS5 453 aa7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 CITED4Q96RK1 184 aa7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 FAM129BQ96TA1 746 aa7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 CCDC9Q9Y3X0 531 aaKnown RBP7.57□□□□□ -1.2
RNU6-560P-201ENST00000364007 ANKRD33BA6NCL7 494 aa7.56□□□□□ -1.2
RNU6-560P-201ENST00000364007 VSIG8P0DPA2 414 aa7.56□□□□□ -1.2
RNU6-560P-201ENST00000364007 SPEM2Q0P670 501 aa7.56□□□□□ -1.2
RNU6-560P-201ENST00000364007 CCINQ13939 588 aa7.56□□□□□ -1.2
RNU6-560P-201ENST00000364007 COL25A1Q9BXS0 654 aaPredicted RBP7.56□□□□□ -1.2
RNU6-560P-201ENST00000364007 GPR182O15218 404 aa7.55□□□□□ -1.2
RNU6-560P-201ENST00000364007 EGFRP00533 1210 aa7.55□□□□□ -1.2
RNU6-560P-201ENST00000364007 MX2P20592 715 aa7.55□□□□□ -1.2
RNU6-560P-201ENST00000364007 USP5P45974 858 aa7.55□□□□□ -1.2
RNU6-560P-201ENST00000364007 KRT76Q01546 638 aa7.55□□□□□ -1.2
RNU6-560P-201ENST00000364007 FAM182BQ5T319 152 aa7.55□□□□□ -1.2
RNU6-560P-201ENST00000364007 TTC16Q8NEE8 873 aa7.55□□□□□ -1.2
RNU6-560P-201ENST00000364007 NIF3L1Q9GZT8 377 aa7.55□□□□□ -1.2
RNU6-560P-201ENST00000364007 ZFATQ9P243 1243 aa7.55□□□□□ -1.2
RNU6-560P-201ENST00000364007 FNDC3AQ9Y2H6 1198 aaKnown RBP7.55□□□□□ -1.2
RNU6-560P-201ENST00000364007 RPLP1P05386 114 aaKnown RBP7.54□□□□□ -1.2
RNU6-560P-201ENST00000364007 ZNF438Q7Z4V0 828 aa7.54□□□□□ -1.2
RNU6-560P-201ENST00000364007 ZSCAN29Q8IWY8 852 aaPredicted RBP7.54□□□□□ -1.2
RNU6-560P-201ENST00000364007 RGS22Q8NE09 1264 aa7.54□□□□□ -1.2
RNU6-560P-201ENST00000364007 BHMTQ93088 406 aa7.54□□□□□ -1.2
RNU6-560P-201ENST00000364007 ELP3Q9H9T3 547 aa7.54□□□□□ -1.2
RNU6-560P-201ENST00000364007 TMEM63CQ9P1W3 806 aa7.54□□□□□ -1.2
RNU6-560P-201ENST00000364007 BMP4P12644 408 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 NFKB1P19838 968 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 PLCB3Q01970 1234 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 PDE3BQ13370 1112 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 DSC3Q14574 896 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 XKR5Q6UX68 686 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 NLRP13Q86W25 1043 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 IRF7Q92985 503 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 CNTNAP3BQ96NU0 1288 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 CNTNAP3Q9BZ76 1288 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 C11orf16Q9NQ32 467 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms