RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 ANKRD18AQ8IVF6 992 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 GJD4Q96KN9 370 aaPredicted RBP6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 CDC5LQ99459 802 aaKnown RBP6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 NSFL1CQ9UNZ2 370 aaKnown RBP6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 JCADQ9P266 1359 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 TAF5LO75529 589 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 CAVIN4Q5BKX8 364 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 USPL1Q5W0Q7 1092 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 MCTP1Q6DN14 999 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 MARCH10Q8NA82 808 aaPredicted RBP6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 CCDC191Q8NCU4 936 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 ITGA6P23229 1130 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 PRPF40BQ6NWY9 871 aaKnown RBP6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 PLEKHM2Q8IWE5 1019 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 SYNE4Q8N205 404 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 ANP32EQ9BTT0 268 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 SOS1Q07889 1333 aaPredicted RBP6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 SLC5A1P13866 664 aa6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 FAM184AQ8NB25 1140 aa6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 SRP68Q9UHB9 627 aaKnown RBP6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 BMP2KLQ5H9B9 411 aa6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 HEG1Q9ULI3 1381 aa6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 VPS37CA5D8V6 355 aaPredicted RBP6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 CPLX1O14810 134 aa6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 HLFQ16534 295 aa6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 JAKMIP1Q96N16 626 aaKnown RBP6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 DBNDD2Q9BQY9 259 aa6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 CRB1P82279 1406 aa6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 POLR1AO95602 1720 aaPredicted RBP6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 ITSN1Q15811 1721 aa6.6□□□□□ -1.35
PCDH11X-202ENST00000361655 HIP1O00291 1037 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 IL15P40933 162 aaPredicted RBP6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 ST5P78524 1137 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 AMOTL1Q8IY63 956 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 CNBD1Q8NA66 436 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 AIDAQ96BJ3 306 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 EDC3Q96F86 508 aaKnown RBP6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 TRIM34Q9BYJ4 488 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 KDRP35968 1356 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 MINDY4BA8MYZ0 360 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 H3BQV1 296 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 DHX16O60231 1041 aaKnown RBP6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 PPFIA3O75145 1194 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 HAND2P61296 217 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 IFFO2Q5TF58 517 aa6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 ZNF772Q68DY9 489 aaPredicted RBP6.59□□□□□ -1.35
PCDH11X-202ENST00000361655 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.59□□□□□ -1.36
PCDH11X-202ENST00000361655 F8W031 263 aaPredicted RBP6.59□□□□□ -1.36
PCDH11X-202ENST00000361655 RIMBP2O15034 1052 aa6.59□□□□□ -1.36
PCDH11X-202ENST00000361655 TDO2P48775 406 aa6.59□□□□□ -1.36
PCDH11X-202ENST00000361655 SYNE3Q6ZMZ3 975 aa6.59□□□□□ -1.36
PCDH11X-202ENST00000361655 THRAP3Q9Y2W1 955 aaKnown RBP6.59□□□□□ -1.36
PCDH11X-202ENST00000361655 PALLDQ8WX93 1383 aa6.59□□□□□ -1.36
PCDH11X-202ENST00000361655 SPATA31A1Q5TZJ5 1347 aa6.59□□□□□ -1.36
PCDH11X-202ENST00000361655 IFT172Q9UG01 1749 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 NBPF26B4DH59 902 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 ZRSR1Q15695 479 aaKnown RBP6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 NBPF14Q5TI25 921 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 NBPF10Q6P3W6 841 aaKnown RBP6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 SIRT2Q8IXJ6 389 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 NBPF15Q8N660 670 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 TCEANC2Q96MN5 208 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 GBP4Q96PP9 640 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 KDM2BQ8NHM5 1336 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 A0A1B0GUL7 405 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 EYA2O00167 538 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 ATP2B2Q01814 1243 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 LRRC24Q50LG9 513 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 PUS3Q9BZE2 481 aaKnown RBP6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 SMC3Q9UQE7 1217 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 MAP3K15Q6ZN16 1313 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 PDE8AO60658 829 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 IGKV5-2P06315 115 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 CASTP20810 708 aaKnown RBP6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 C8orf34Q49A92 452 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 GIGYF2Q6Y7W6 1299 aaKnown RBP6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 EVI5LQ96CN4 794 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 PARP3Q9Y6F1 533 aa6.58□□□□□ -1.36
PCDH11X-202ENST00000361655 ERICH2A1L162 156 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 ZSCAN29Q8IWY8 852 aaPredicted RBP6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 SSH2Q76I76 1423 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 RABEP1Q15276 862 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 DZIP1Q86YF9 867 aaKnown RBP6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 NYXQ9GZU5 481 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 GREM2Q9H772 168 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 STK32BQ9NY57 414 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 CYP46A1Q9Y6A2 500 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 PSMA5P28066 241 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 IL6STP40189 918 aaPredicted RBP6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 DCCP43146 1447 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 AKAP17AQ02040 695 aaKnown RBP6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 MAP3K12Q12852 859 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 PARP10Q53GL7 1025 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 EPHA10Q5JZY3 1008 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 BLOC1S2Q6QNY1 142 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 MYOM1P52179 1685 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 VPS72Q15906 364 aa6.57□□□□□ -1.36
PCDH11X-202ENST00000361655 SLC9C2Q5TAH2 1124 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms