RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 PRR5LQ6MZQ0 368 aa22.71■■□□□ 1.23
CLK2-202ENST00000361168 NBPF5PQ86XG9 351 aaPredicted RBP22.71■■□□□ 1.23
CLK2-202ENST00000361168 ANKRD36CQ5JPF3 1778 aa22.71■■□□□ 1.23
CLK2-202ENST00000361168 TRIM28Q13263 835 aaKnown RBP22.7■■□□□ 1.23
CLK2-202ENST00000361168 TMEM57Q8N5G2 664 aa22.7■■□□□ 1.23
CLK2-202ENST00000361168 ERFEQ4G0M1 354 aa22.7■■□□□ 1.22
CLK2-202ENST00000361168 TRMT112Q9UI30 125 aaKnown RBP22.7■■□□□ 1.22
CLK2-202ENST00000361168 COL24A1Q17RW2 1714 aa22.7■■□□□ 1.22
CLK2-202ENST00000361168 POLD1P28340 1107 aa22.69■■□□□ 1.22
CLK2-202ENST00000361168 RRP1P56182 461 aaKnown RBP22.69■■□□□ 1.22
CLK2-202ENST00000361168 GCKRQ14397 625 aa22.69■■□□□ 1.22
CLK2-202ENST00000361168 CCDC191Q8NCU4 936 aa22.69■■□□□ 1.22
CLK2-202ENST00000361168 SRCIN1Q9C0H9 1055 aa22.69■■□□□ 1.22
CLK2-202ENST00000361168 CWC25Q9NXE8 425 aaPredicted RBP22.69■■□□□ 1.22
CLK2-202ENST00000361168 AFDNP55196 1824 aaKnown RBP22.68■■□□□ 1.22
CLK2-202ENST00000361168 ABCC12Q96J65 1359 aa22.68■■□□□ 1.22
CLK2-202ENST00000361168 PARP10Q53GL7 1025 aa22.68■■□□□ 1.22
CLK2-202ENST00000361168 DZIP1LQ8IYY4 767 aaKnown RBP22.68■■□□□ 1.22
CLK2-202ENST00000361168 CNBD1Q8NA66 436 aa22.68■■□□□ 1.22
CLK2-202ENST00000361168 UTP14AQ9BVJ6 771 aaKnown RBP22.68■■□□□ 1.22
CLK2-202ENST00000361168 PPP1R1BQ9UD71 204 aaPredicted RBP22.67■■□□□ 1.22
CLK2-202ENST00000361168 NBPF7P0C2Y1 421 aaPredicted RBP22.67■■□□□ 1.22
CLK2-202ENST00000361168 HCLS1P14317 486 aaPredicted RBP22.67■■□□□ 1.22
CLK2-202ENST00000361168 C3orf67Q6ZVT6 689 aa22.67■■□□□ 1.22
CLK2-202ENST00000361168 FTSJ3Q8IY81 847 aaKnown RBP22.67■■□□□ 1.22
CLK2-202ENST00000361168 NPHP1O15259 732 aa22.66■■□□□ 1.22
CLK2-202ENST00000361168 INTS3Q68E01 1043 aaKnown RBP22.66■■□□□ 1.22
CLK2-202ENST00000361168 TPTE2Q6XPS3 522 aa22.66■■□□□ 1.22
CLK2-202ENST00000361168 UBE3BQ7Z3V4 1068 aa22.66■■□□□ 1.22
CLK2-202ENST00000361168 KLHL34Q8N239 644 aa22.66■■□□□ 1.22
CLK2-202ENST00000361168 PPP1R42Q7Z4L9 355 aa22.65■■□□□ 1.22
CLK2-202ENST00000361168 USP44Q9H0E7 712 aa22.65■■□□□ 1.22
CLK2-202ENST00000361168 GTF2E1P29083 439 aaPredicted RBP22.65■■□□□ 1.22
CLK2-202ENST00000361168 ZBTB38Q8NAP3 1195 aaPredicted RBP22.65■■□□□ 1.22
CLK2-202ENST00000361168 COG6Q9Y2V7 657 aa22.65■■□□□ 1.22
CLK2-202ENST00000361168 CASP7P55210 303 aa22.64■■□□□ 1.21
CLK2-202ENST00000361168 PXDNLA1KZ92 1463 aa22.64■■□□□ 1.21
CLK2-202ENST00000361168 NRXN2Q9P2S2 1712 aa22.64■■□□□ 1.21
CLK2-202ENST00000361168 H7C1W4 665 aa22.63■■□□□ 1.21
CLK2-202ENST00000361168 ALDH1L1O75891 902 aa22.63■■□□□ 1.21
CLK2-202ENST00000361168 CCT4P50991 539 aaKnown RBP22.63■■□□□ 1.21
CLK2-202ENST00000361168 RNF123Q5XPI4 1314 aa22.63■■□□□ 1.21
CLK2-202ENST00000361168 SH3TC1Q8TE82 1336 aa22.63■■□□□ 1.21
CLK2-202ENST00000361168 MEIS3Q99687 375 aa22.63■■□□□ 1.21
CLK2-202ENST00000361168 GRM8O00222 908 aa22.63■■□□□ 1.21
CLK2-202ENST00000361168 ITPRIPQ8IWB1 547 aa22.63■■□□□ 1.21
CLK2-202ENST00000361168 PCCAP05165 728 aaPredicted RBP22.62■■□□□ 1.21
CLK2-202ENST00000361168 NYXQ9GZU5 481 aa22.62■■□□□ 1.21
CLK2-202ENST00000361168 C9orf78Q9NZ63 289 aaPredicted RBP22.62■■□□□ 1.21
CLK2-202ENST00000361168 IRS4O14654 1257 aaPredicted RBP22.61■■□□□ 1.21
CLK2-202ENST00000361168 IRX6P78412 446 aaPredicted RBP22.61■■□□□ 1.21
CLK2-202ENST00000361168 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.61■■□□□ 1.21
CLK2-202ENST00000361168 FHDC1Q9C0D6 1143 aaPredicted RBP22.61■■□□□ 1.21
CLK2-202ENST00000361168 WWC3Q9ULE0 1092 aa22.61■■□□□ 1.21
CLK2-202ENST00000361168 EPHA10Q5JZY3 1008 aa22.6■■□□□ 1.21
CLK2-202ENST00000361168 KAZALD1Q96I82 304 aa22.6■■□□□ 1.21
CLK2-202ENST00000361168 TNRC6CQ9HCJ0 1690 aaKnown RBP22.6■■□□□ 1.21
CLK2-202ENST00000361168 C10orf71Q711Q0 1435 aa22.6■■□□□ 1.21
CLK2-202ENST00000361168 CHRNA5P30532 468 aa22.59■■□□□ 1.21
CLK2-202ENST00000361168 ST5P78524 1137 aa22.59■■□□□ 1.21
CLK2-202ENST00000361168 NLGN2Q8NFZ4 835 aa22.59■■□□□ 1.21
CLK2-202ENST00000361168 CCDC85AQ96PX6 553 aaPredicted RBP22.59■■□□□ 1.21
CLK2-202ENST00000361168 IBTKQ9P2D0 1353 aaPredicted RBP22.59■■□□□ 1.21
CLK2-202ENST00000361168 PDE3AQ14432 1141 aa22.58■■□□□ 1.21
CLK2-202ENST00000361168 SUCLG2Q96I99 432 aa22.58■■□□□ 1.21
CLK2-202ENST00000361168 ANKRD31Q8N7Z5 1873 aa22.58■■□□□ 1.2
CLK2-202ENST00000361168 A0A0G2JLW4 131 aa22.57■■□□□ 1.2
CLK2-202ENST00000361168 SLC10A5Q5PT55 438 aa22.57■■□□□ 1.2
CLK2-202ENST00000361168 BRIP1Q9BX63 1249 aa22.57■■□□□ 1.2
CLK2-202ENST00000361168 UTYO14607 1347 aa22.57■■□□□ 1.2
CLK2-202ENST00000361168 ZBTB7BO15156 539 aaPredicted RBP22.57■■□□□ 1.2
CLK2-202ENST00000361168 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
CLK2-202ENST00000361168 MVPQ14764 893 aaKnown RBP22.57■■□□□ 1.2
CLK2-202ENST00000361168 N4BP2Q86UW6 1770 aaPredicted RBP22.56■■□□□ 1.2
CLK2-202ENST00000361168 C1orf115Q9H7X2 142 aa22.56■■□□□ 1.2
CLK2-202ENST00000361168 DDX60Q8IY21 1712 aaKnown RBP22.56■■□□□ 1.2
CLK2-202ENST00000361168 SLC51AQ86UW1 340 aa22.55■■□□□ 1.2
CLK2-202ENST00000361168 FOXO4P98177 505 aa22.55■■□□□ 1.2
CLK2-202ENST00000361168 SYT17Q9BSW7 474 aa22.55■■□□□ 1.2
CLK2-202ENST00000361168 CDHR2Q9BYE9 1310 aa22.54■■□□□ 1.2
CLK2-202ENST00000361168 DPEP1P16444 411 aa22.54■■□□□ 1.2
CLK2-202ENST00000361168 KCNA3P22001 575 aa22.54■■□□□ 1.2
CLK2-202ENST00000361168 CRBNQ96SW2 442 aa22.54■■□□□ 1.2
CLK2-202ENST00000361168 UBTFL1P0CB47 393 aaPredicted RBP22.53■■□□□ 1.2
CLK2-202ENST00000361168 NLRP3Q96P20 1036 aa22.53■■□□□ 1.2
CLK2-202ENST00000361168 BICC1Q9H694 974 aaKnown RBP22.53■■□□□ 1.2
CLK2-202ENST00000361168 LRRFIP2Q9Y608 721 aaKnown RBP22.53■■□□□ 1.2
CLK2-202ENST00000361168 COL4A1P02462 1669 aa22.53■■□□□ 1.2
CLK2-202ENST00000361168 KLRG2A4D1S0 409 aaPredicted RBP22.53■■□□□ 1.2
CLK2-202ENST00000361168 CD2APQ9Y5K6 639 aa22.53■■□□□ 1.2
CLK2-202ENST00000361168 PDE8AO60658 829 aa22.52■■□□□ 1.2
CLK2-202ENST00000361168 SRGNP10124 158 aa22.52■■□□□ 1.2
CLK2-202ENST00000361168 MS4A1P11836 297 aa22.52■■□□□ 1.2
CLK2-202ENST00000361168 C2CD5Q86YS7 1000 aa22.52■■□□□ 1.2
CLK2-202ENST00000361168 TTLL11Q8NHH1 800 aa22.52■■□□□ 1.2
CLK2-202ENST00000361168 CRY2Q49AN0 593 aa22.51■■□□□ 1.19
CLK2-202ENST00000361168 LRP5O75197 1615 aa22.51■■□□□ 1.19
CLK2-202ENST00000361168 KIF13BQ9NQT8 1826 aa22.51■■□□□ 1.19
CLK2-202ENST00000361168 COL11A2P13942 1736 aaPredicted RBP22.51■■□□□ 1.19
CLK2-202ENST00000361168 PDE6BP35913 854 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms