RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 A0A0D9SFI3 127 aa12.03□□□□□ -0.48
PTPRA-203ENST00000356147 NECTIN1Q15223 517 aa12.03□□□□□ -0.48
PTPRA-203ENST00000356147 TPD52L1Q16890 204 aaPredicted RBP12.03□□□□□ -0.48
PTPRA-203ENST00000356147 ECHDC1Q9NTX5 307 aa12.03□□□□□ -0.48
PTPRA-203ENST00000356147 FLT4P35916 1363 aa12.03□□□□□ -0.48
PTPRA-203ENST00000356147 MON2Q7Z3U7 1717 aa12.03□□□□□ -0.48
PTPRA-203ENST00000356147 CCDC171Q6TFL3 1326 aa12.03□□□□□ -0.48
PTPRA-203ENST00000356147 USP27XA6NNY8 438 aa12.03□□□□□ -0.48
PTPRA-203ENST00000356147 ZNF165P49910 485 aa12.03□□□□□ -0.48
PTPRA-203ENST00000356147 AIMP1Q12904 312 aaKnown RBP12.03□□□□□ -0.48
PTPRA-203ENST00000356147 PROSER3Q2NL68 480 aa12.03□□□□□ -0.48
PTPRA-203ENST00000356147 ZSCAN25Q6NSZ9 544 aa12.03□□□□□ -0.48
PTPRA-203ENST00000356147 TRMT1Q9NXH9 659 aaKnown RBP12.03□□□□□ -0.48
PTPRA-203ENST00000356147 SLC27A2O14975 620 aa12.02□□□□□ -0.48
PTPRA-203ENST00000356147 RUFY2Q8WXA3 655 aa12.02□□□□□ -0.48
PTPRA-203ENST00000356147 PGBD1Q96JS3 809 aa12.02□□□□□ -0.48
PTPRA-203ENST00000356147 PODXL2Q9NZ53 605 aa12.02□□□□□ -0.48
PTPRA-203ENST00000356147 RICTORQ6R327 1708 aa12.02□□□□□ -0.49
PTPRA-203ENST00000356147 FILIP1Q7Z7B0 1213 aa12.02□□□□□ -0.49
PTPRA-203ENST00000356147 ANKRD7Q92527 254 aa12.02□□□□□ -0.49
PTPRA-203ENST00000356147 CLIP2Q9UDT6 1046 aa12.02□□□□□ -0.49
PTPRA-203ENST00000356147 TAOK2Q9UL54 1235 aa12.02□□□□□ -0.49
PTPRA-203ENST00000356147 NRKQ7Z2Y5 1582 aa12.02□□□□□ -0.49
PTPRA-203ENST00000356147 PLEKHG3A1L390 1219 aa12.02□□□□□ -0.49
PTPRA-203ENST00000356147 ZNF75DP51815 510 aa12.02□□□□□ -0.49
PTPRA-203ENST00000356147 MPRIPQ6WCQ1 1025 aa12.02□□□□□ -0.49
PTPRA-203ENST00000356147 ZNF589Q86UQ0 364 aaPredicted RBP12.02□□□□□ -0.49
PTPRA-203ENST00000356147 LEO1Q8WVC0 666 aaPredicted RBP12.02□□□□□ -0.49
PTPRA-203ENST00000356147 SH2B1Q9NRF2 756 aaPredicted RBP12.02□□□□□ -0.49
PTPRA-203ENST00000356147 LTKP29376 864 aa12.01□□□□□ -0.49
PTPRA-203ENST00000356147 BLOC1S2Q6QNY1 142 aa12.01□□□□□ -0.49
PTPRA-203ENST00000356147 ZNF771Q7L3S4 317 aaPredicted RBP12.01□□□□□ -0.49
PTPRA-203ENST00000356147 EAF2Q96CJ1 260 aaPredicted RBP12.01□□□□□ -0.49
PTPRA-203ENST00000356147 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
PTPRA-203ENST00000356147 FSD1Q9BTV5 496 aa12.01□□□□□ -0.49
PTPRA-203ENST00000356147 MAP3K2Q9Y2U5 619 aa12.01□□□□□ -0.49
PTPRA-203ENST00000356147 SBNO1A3KN83 1393 aa12.01□□□□□ -0.49
PTPRA-203ENST00000356147 HOXC9P31274 260 aa12.01□□□□□ -0.49
PTPRA-203ENST00000356147 UTP14CQ5TAP6 766 aaKnown RBP12.01□□□□□ -0.49
PTPRA-203ENST00000356147 ZSCAN31Q96LW9 406 aaPredicted RBP12.01□□□□□ -0.49
PTPRA-203ENST00000356147 USP16Q9Y5T5 823 aa12.01□□□□□ -0.49
PTPRA-203ENST00000356147 ITSN1Q15811 1721 aa12.01□□□□□ -0.49
PTPRA-203ENST00000356147 MAP3K5Q99683 1374 aa12□□□□□ -0.49
PTPRA-203ENST00000356147 SETD1AO15047 1707 aaKnown RBP12□□□□□ -0.49
PTPRA-203ENST00000356147 KDRP35968 1356 aa12□□□□□ -0.49
PTPRA-203ENST00000356147 SETD1BQ9UPS6 1966 aaKnown RBP12□□□□□ -0.49
PTPRA-203ENST00000356147 CCDC129Q6ZRS4 1044 aa12□□□□□ -0.49
PTPRA-203ENST00000356147 XRN1Q8IZH2 1706 aaKnown RBP12□□□□□ -0.49
PTPRA-203ENST00000356147 NAP1L2Q9ULW6 460 aaPredicted RBP12□□□□□ -0.49
PTPRA-203ENST00000356147 NRXN3Q9Y4C0 1643 aa12□□□□□ -0.49
PTPRA-203ENST00000356147 CTIFO43310 598 aaKnown RBP12□□□□□ -0.49
PTPRA-203ENST00000356147 HSP90B1P14625 803 aaKnown RBP12□□□□□ -0.49
PTPRA-203ENST00000356147 GUCY1B3Q02153 619 aa12□□□□□ -0.49
PTPRA-203ENST00000356147 C11orf57Q6ZUT1 292 aaPredicted RBP12□□□□□ -0.49
PTPRA-203ENST00000356147 EIF4A1P60842 406 aaKnown RBP11.99□□□□□ -0.49
PTPRA-203ENST00000356147 TOB2Q14106 344 aaPredicted RBP11.99□□□□□ -0.49
PTPRA-203ENST00000356147 ABTB2Q8N961 1025 aa11.99□□□□□ -0.49
PTPRA-203ENST00000356147 CCDC112Q8NEF3 446 aa11.99□□□□□ -0.49
PTPRA-203ENST00000356147 BRF1Q92994 677 aa11.99□□□□□ -0.49
PTPRA-203ENST00000356147 USP31Q70CQ4 1352 aa11.99□□□□□ -0.49
PTPRA-203ENST00000356147 SASH1O94885 1247 aa11.99□□□□□ -0.49
PTPRA-203ENST00000356147 SLFNL1Q499Z3 407 aa11.99□□□□□ -0.49
PTPRA-203ENST00000356147 CEBPAP49715 358 aaPredicted RBP11.98□□□□□ -0.49
PTPRA-203ENST00000356147 MAP4K1Q92918 833 aa11.98□□□□□ -0.49
PTPRA-203ENST00000356147 LRRC59Q96AG4 307 aaKnown RBP11.98□□□□□ -0.49
PTPRA-203ENST00000356147 SEC62Q99442 399 aaKnown RBP11.98□□□□□ -0.49
PTPRA-203ENST00000356147 TTC41PQ6P2S7 1318 aa11.98□□□□□ -0.49
PTPRA-203ENST00000356147 H3BQV1 296 aa11.98□□□□□ -0.49
PTPRA-203ENST00000356147 TPM3P06753 285 aa11.98□□□□□ -0.49
PTPRA-203ENST00000356147 IFFO2Q5TF58 517 aa11.98□□□□□ -0.49
PTPRA-203ENST00000356147 PLA2G4DQ86XP0 818 aa11.98□□□□□ -0.49
PTPRA-203ENST00000356147 EVI5LQ96CN4 794 aa11.98□□□□□ -0.49
PTPRA-203ENST00000356147 GTPBP4Q9BZE4 634 aaKnown RBP11.98□□□□□ -0.49
PTPRA-203ENST00000356147 ADCY9O60503 1353 aa11.98□□□□□ -0.49
PTPRA-203ENST00000356147 AKAP12Q02952 1782 aa11.98□□□□□ -0.49
PTPRA-203ENST00000356147 ZBTB22O15209 634 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 EPB41L2O43491 1005 aaKnown RBP11.97□□□□□ -0.49
PTPRA-203ENST00000356147 GPATCH3Q96I76 525 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 SUCLG2Q96I99 432 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 CLSTN2Q9H4D0 955 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 ST7Q9NRC1 585 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 CGNQ9P2M7 1197 aaKnown RBP11.97□□□□□ -0.49
PTPRA-203ENST00000356147 ZNF215Q9UL58 517 aaPredicted RBP11.97□□□□□ -0.49
PTPRA-203ENST00000356147 PPP6R1Q9UPN7 881 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 AMOTL2Q9Y2J4 779 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 BTBD11A6QL63 1104 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 GOLGA6L19H0YKK7 550 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 RPS6KB1P23443 525 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 TEFQ10587 303 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 HSP90AB4PQ58FF6 505 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 CEP135Q66GS9 1140 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 TM6SF1Q9BZW5 370 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 BICC1Q9H694 974 aaKnown RBP11.97□□□□□ -0.49
PTPRA-203ENST00000356147 CTNNA3Q9UI47 895 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 TTC21AQ8NDW8 1320 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 RGPD1P0DJD0 1748 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 SMTNL1A8MU46 457 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 PIP4K2AP48426 406 aaPredicted RBP11.97□□□□□ -0.49
PTPRA-203ENST00000356147 FGD1P98174 961 aa11.97□□□□□ -0.49
PTPRA-203ENST00000356147 SCAND2PQ9GZW5 306 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms