RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 ALDH1B1P30837 517 aa20.91■□□□□ 0.94
PDGFA-201ENST00000354513 HOXA10P31260 410 aaPredicted RBP20.91■□□□□ 0.94
PDGFA-201ENST00000354513 IARSP41252 1262 aaKnown RBP20.91■□□□□ 0.94
PDGFA-201ENST00000354513 RTKN2Q8IZC4 609 aa20.91■□□□□ 0.94
PDGFA-201ENST00000354513 SYNE4Q8N205 404 aa20.91■□□□□ 0.94
PDGFA-201ENST00000354513 TAF1DQ9H5J8 278 aaPredicted RBP20.91■□□□□ 0.94
PDGFA-201ENST00000354513 GTF2E1P29083 439 aaPredicted RBP20.9■□□□□ 0.94
PDGFA-201ENST00000354513 PASKQ96RG2 1323 aa20.9■□□□□ 0.94
PDGFA-201ENST00000354513 FZD9O00144 591 aa20.89■□□□□ 0.93
PDGFA-201ENST00000354513 PSMD1Q99460 953 aa20.89■□□□□ 0.93
PDGFA-201ENST00000354513 COL4A1P02462 1669 aa20.89■□□□□ 0.93
PDGFA-201ENST00000354513 MYBBP1AQ9BQG0 1328 aaKnown RBP20.89■□□□□ 0.93
PDGFA-201ENST00000354513 KRT24Q2M2I5 525 aa20.88■□□□□ 0.93
PDGFA-201ENST00000354513 COL13A1Q5TAT6 717 aaPredicted RBP20.88■□□□□ 0.93
PDGFA-201ENST00000354513 CCDC146Q8IYE0 955 aa20.88■□□□□ 0.93
PDGFA-201ENST00000354513 BABAM1Q9NWV8 329 aa20.88■□□□□ 0.93
PDGFA-201ENST00000354513 EIF2S2P20042 333 aaKnown RBP20.87■□□□□ 0.93
PDGFA-201ENST00000354513 TRIM35Q9UPQ4 493 aa20.87■□□□□ 0.93
PDGFA-201ENST00000354513 DUOX1Q9NRD9 1551 aa20.87■□□□□ 0.93
PDGFA-201ENST00000354513 IQCA1LA6NCM1 817 aa20.86■□□□□ 0.93
PDGFA-201ENST00000354513 DDX10Q13206 875 aaKnown RBP20.86■□□□□ 0.93
PDGFA-201ENST00000354513 LDHDQ86WU2 507 aa20.86■□□□□ 0.93
PDGFA-201ENST00000354513 RNF123Q5XPI4 1314 aa20.86■□□□□ 0.93
PDGFA-201ENST00000354513 TRPM7Q96QT4 1865 aa20.86■□□□□ 0.93
PDGFA-201ENST00000354513 RPGRQ92834 1020 aaKnown RBP20.85■□□□□ 0.93
PDGFA-201ENST00000354513 CRAMP1Q96RY5 1269 aa20.85■□□□□ 0.93
PDGFA-201ENST00000354513 CREBZFQ9NS37 354 aa20.85■□□□□ 0.93
PDGFA-201ENST00000354513 ITGBL1O95965 494 aaPredicted RBP20.84■□□□□ 0.93
PDGFA-201ENST00000354513 HSPA1AP0DMV8 641 aaKnown RBP20.84■□□□□ 0.93
PDGFA-201ENST00000354513 HSPA1BP0DMV9 641 aaKnown RBP20.84■□□□□ 0.93
PDGFA-201ENST00000354513 PARP10Q53GL7 1025 aa20.84■□□□□ 0.93
PDGFA-201ENST00000354513 NECTIN2Q92692 538 aa20.84■□□□□ 0.93
PDGFA-201ENST00000354513 CHL1O00533 1208 aa20.83■□□□□ 0.93
PDGFA-201ENST00000354513 PPEF1O14829 653 aaPredicted RBP20.83■□□□□ 0.93
PDGFA-201ENST00000354513 LMOD3Q0VAK6 560 aa20.83■□□□□ 0.93
PDGFA-201ENST00000354513 SLC10A5Q5PT55 438 aa20.83■□□□□ 0.93
PDGFA-201ENST00000354513 CC2D2BQ6DHV5 1058 aa20.83■□□□□ 0.93
PDGFA-201ENST00000354513 HACL1Q9UJ83 578 aa20.83■□□□□ 0.93
PDGFA-201ENST00000354513 THSD7BQ9C0I4 1608 aa20.83■□□□□ 0.93
PDGFA-201ENST00000354513 ABCC4O15439 1325 aa20.82■□□□□ 0.92
PDGFA-201ENST00000354513 EPHX2P34913 555 aa20.82■□□□□ 0.92
PDGFA-201ENST00000354513 COPS6Q7L5N1 327 aa20.82■□□□□ 0.92
PDGFA-201ENST00000354513 PPP1R42Q7Z4L9 355 aa20.82■□□□□ 0.92
PDGFA-201ENST00000354513 XAGE3Q8WTP9 111 aa20.82■□□□□ 0.92
PDGFA-201ENST00000354513 CNTNAP1P78357 1384 aa20.82■□□□□ 0.92
PDGFA-201ENST00000354513 NEUROD2Q15784 382 aa20.81■□□□□ 0.92
PDGFA-201ENST00000354513 NLRP10Q86W26 655 aa20.81■□□□□ 0.92
PDGFA-201ENST00000354513 GPC2Q8N158 579 aa20.81■□□□□ 0.92
PDGFA-201ENST00000354513 RBM17Q96I25 401 aaKnown RBP20.81■□□□□ 0.92
PDGFA-201ENST00000354513 MKRN1Q9UHC7 482 aaKnown RBP20.81■□□□□ 0.92
PDGFA-201ENST00000354513 TCERG1O14776 1098 aaKnown RBP20.8■□□□□ 0.92
PDGFA-201ENST00000354513 EAPPQ56P03 285 aaPredicted RBP20.8■□□□□ 0.92
PDGFA-201ENST00000354513 RUNDC1Q96C34 613 aa20.8■□□□□ 0.92
PDGFA-201ENST00000354513 UTP14AQ9BVJ6 771 aaKnown RBP20.8■□□□□ 0.92
PDGFA-201ENST00000354513 DDX21Q9NR30 783 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDGFA-201ENST00000354513 SCNN1DP51172 638 aa20.78■□□□□ 0.92
PDGFA-201ENST00000354513 AIMP1Q12904 312 aaKnown RBP20.78■□□□□ 0.92
PDGFA-201ENST00000354513 NLRP3Q96P20 1036 aa20.78■□□□□ 0.92
PDGFA-201ENST00000354513 CHPF2Q9P2E5 772 aa20.78■□□□□ 0.92
PDGFA-201ENST00000354513 ADAMTS8Q9UP79 889 aa20.78■□□□□ 0.92
PDGFA-201ENST00000354513 ATP6V0A2Q9Y487 856 aa20.78■□□□□ 0.92
PDGFA-201ENST00000354513 JDP2Q8WYK2 163 aa20.78■□□□□ 0.92
PDGFA-201ENST00000354513 HCLS1P14317 486 aaPredicted RBP20.77■□□□□ 0.91
PDGFA-201ENST00000354513 ZEB1P37275 1124 aaPredicted RBP20.77■□□□□ 0.91
PDGFA-201ENST00000354513 TCIRG1Q13488 830 aa20.77■□□□□ 0.91
PDGFA-201ENST00000354513 GRIPAP1Q4V328 841 aa20.77■□□□□ 0.91
PDGFA-201ENST00000354513 MAP1SQ66K74 1059 aaPredicted RBP20.77■□□□□ 0.91
PDGFA-201ENST00000354513 LARGE2Q8N3Y3 721 aa20.77■□□□□ 0.91
PDGFA-201ENST00000354513 GJA3Q9Y6H8 435 aa20.77■□□□□ 0.91
PDGFA-201ENST00000354513 AOC3Q16853 763 aa20.76■□□□□ 0.91
PDGFA-201ENST00000354513 HSP90AB3PQ58FF7 597 aa20.76■□□□□ 0.91
PDGFA-201ENST00000354513 ZNF428Q96B54 188 aa20.76■□□□□ 0.91
PDGFA-201ENST00000354513 EPS15P42566 896 aa20.75■□□□□ 0.91
PDGFA-201ENST00000354513 EIF6P56537 245 aaKnown RBP20.75■□□□□ 0.91
PDGFA-201ENST00000354513 PNMA8AQ86V59 439 aaPredicted RBP20.75■□□□□ 0.91
PDGFA-201ENST00000354513 RTFDC1Q9BY42 306 aaPredicted RBP20.75■□□□□ 0.91
PDGFA-201ENST00000354513 CLEC11AQ9Y240 323 aa20.75■□□□□ 0.91
PDGFA-201ENST00000354513 LAS1LQ9Y4W2 734 aaKnown RBP20.75■□□□□ 0.91
PDGFA-201ENST00000354513 TMEM88BA6NKF7 163 aa20.74■□□□□ 0.91
PDGFA-201ENST00000354513 PPIP5K2O43314 1243 aa20.74■□□□□ 0.91
PDGFA-201ENST00000354513 WDR43Q15061 677 aaKnown RBP eCLIP20.74■□□□□ 0.91
PDGFA-201ENST00000354513 CNTROBQ8N137 903 aa20.74■□□□□ 0.91
PDGFA-201ENST00000354513 PRKRIP1Q9H875 184 aaPredicted RBP20.74■□□□□ 0.91
PDGFA-201ENST00000354513 HOXB7P09629 217 aa20.73■□□□□ 0.91
PDGFA-201ENST00000354513 FMR1Q06787 632 aaKnown RBP eCLIP20.73■□□□□ 0.91
PDGFA-201ENST00000354513 HDGFL1Q5TGJ6 251 aa20.73■□□□□ 0.91
PDGFA-201ENST00000354513 ISCA1Q9BUE6 129 aa20.73■□□□□ 0.91
PDGFA-201ENST00000354513 TRMT112Q9UI30 125 aaKnown RBP20.73■□□□□ 0.91
PDGFA-201ENST00000354513 PSME4Q14997 1843 aa20.73■□□□□ 0.91
PDGFA-201ENST00000354513 SH3TC1Q8TE82 1336 aa20.72■□□□□ 0.91
PDGFA-201ENST00000354513 SPEF2Q9C093 1822 aa20.72■□□□□ 0.91
PDGFA-201ENST00000354513 ZNF853P0CG23 659 aa20.72■□□□□ 0.91
PDGFA-201ENST00000354513 VEGFBP49765 207 aa20.72■□□□□ 0.91
PDGFA-201ENST00000354513 SP8Q8IXZ3 490 aa20.72■□□□□ 0.91
PDGFA-201ENST00000354513 NIM1KQ8IY84 436 aa20.72■□□□□ 0.91
PDGFA-201ENST00000354513 PLBD2Q8NHP8 589 aa20.72■□□□□ 0.91
PDGFA-201ENST00000354513 MBIPQ9NS73 344 aa20.72■□□□□ 0.91
PDGFA-201ENST00000354513 SCN9AQ15858 1988 aa20.72■□□□□ 0.91
PDGFA-201ENST00000354513 GRAPQ13588 217 aa20.71■□□□□ 0.91
PDGFA-201ENST00000354513 TNS4Q8IZW8 715 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms