RNA–Protein interactions for RNA: ENST00000344022.7

PXMP4-202, Transcript of peroxisomal membrane protein 4, humanhuman

TSL 2 BASIC

Gene PXMP4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-202ENST00000344022 TAOK3Q9H2K8 898 aa20.38■□□□□ 0.85
PXMP4-202ENST00000344022 DDX21Q9NR30 783 aaKnown RBP eCLIP20.38■□□□□ 0.85
PXMP4-202ENST00000344022 HSP90AB3PQ58FF7 597 aa20.37■□□□□ 0.85
PXMP4-202ENST00000344022 HDGFL1Q5TGJ6 251 aa20.37■□□□□ 0.85
PXMP4-202ENST00000344022 C16orf71Q8IYS4 520 aaPredicted RBP20.37■□□□□ 0.85
PXMP4-202ENST00000344022 RIC1Q4ADV7 1423 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 UBN2Q6ZU65 1347 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 DICER1Q9UPY3 1922 aaKnown RBP20.36■□□□□ 0.85
PXMP4-202ENST00000344022 ANP32CO43423 234 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 ANXA1P04083 346 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 GNAI1P63096 354 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 KRT24Q2M2I5 525 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 ERFEQ4G0M1 354 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 SUSD4Q5VX71 490 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 COPS6Q7L5N1 327 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 NUTM1Q86Y26 1132 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 IFT57Q9NWB7 429 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 SSUH2Q9Y2M2 353 aa20.36■□□□□ 0.85
PXMP4-202ENST00000344022 TNRC6CQ9HCJ0 1690 aaKnown RBP20.35■□□□□ 0.85
PXMP4-202ENST00000344022 ZNF853P0CG23 659 aa20.35■□□□□ 0.85
PXMP4-202ENST00000344022 PRELPP51888 382 aa20.35■□□□□ 0.85
PXMP4-202ENST00000344022 AIMP1Q12904 312 aaKnown RBP20.35■□□□□ 0.85
PXMP4-202ENST00000344022 CRY2Q49AN0 593 aa20.35■□□□□ 0.85
PXMP4-202ENST00000344022 CCDC93Q567U6 631 aa20.35■□□□□ 0.85
PXMP4-202ENST00000344022 XAGE3Q8WTP9 111 aa20.35■□□□□ 0.85
PXMP4-202ENST00000344022 MBIPQ9NS73 344 aa20.35■□□□□ 0.85
PXMP4-202ENST00000344022 TIAM2Q8IVF5 1701 aa20.35■□□□□ 0.85
PXMP4-202ENST00000344022 ABCC12Q96J65 1359 aa20.34■□□□□ 0.85
PXMP4-202ENST00000344022 GLTPD2A6NH11 291 aa20.34■□□□□ 0.85
PXMP4-202ENST00000344022 HSPA6P17066 643 aa20.34■□□□□ 0.85
PXMP4-202ENST00000344022 C7orf43Q8WVR3 580 aa20.34■□□□□ 0.85
PXMP4-202ENST00000344022 RPGRQ92834 1020 aaKnown RBP20.34■□□□□ 0.85
PXMP4-202ENST00000344022 UTP14AQ9BVJ6 771 aaKnown RBP20.34■□□□□ 0.85
PXMP4-202ENST00000344022 DBF4Q9UBU7 674 aaPredicted RBP20.34■□□□□ 0.85
PXMP4-202ENST00000344022 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.85
PXMP4-202ENST00000344022 NTSR2O95665 410 aa20.33■□□□□ 0.85
PXMP4-202ENST00000344022 DUSP27Q5VZP5 1158 aa20.33■□□□□ 0.85
PXMP4-202ENST00000344022 DPY19L2Q6NUT2 758 aa20.33■□□□□ 0.85
PXMP4-202ENST00000344022 RTKN2Q8IZC4 609 aa20.33■□□□□ 0.85
PXMP4-202ENST00000344022 RRAGCQ9HB90 399 aa20.33■□□□□ 0.85
PXMP4-202ENST00000344022 CHPF2Q9P2E5 772 aa20.33■□□□□ 0.85
PXMP4-202ENST00000344022 ANKRD36CQ5JPF3 1778 aa20.32■□□□□ 0.84
PXMP4-202ENST00000344022 RBM46Q8TBY0 533 aaKnown RBP20.32■□□□□ 0.84
PXMP4-202ENST00000344022 CHMP4AQ9BY43 222 aa20.32■□□□□ 0.84
PXMP4-202ENST00000344022 HYPKQ9NX55 129 aa20.32■□□□□ 0.84
PXMP4-202ENST00000344022 HOXA10P31260 410 aaPredicted RBP20.31■□□□□ 0.84
PXMP4-202ENST00000344022 TCIRG1Q13488 830 aa20.31■□□□□ 0.84
PXMP4-202ENST00000344022 CCDC184Q52MB2 194 aa20.31■□□□□ 0.84
PXMP4-202ENST00000344022 NLRP3Q96P20 1036 aa20.31■□□□□ 0.84
PXMP4-202ENST00000344022 FKBP4Q02790 459 aaKnown RBP eCLIP20.3■□□□□ 0.84
PXMP4-202ENST00000344022 CC2D2BQ6DHV5 1058 aa20.3■□□□□ 0.84
PXMP4-202ENST00000344022 RBM17Q96I25 401 aaKnown RBP20.3■□□□□ 0.84
PXMP4-202ENST00000344022 MRS2Q9HD23 443 aa20.3■□□□□ 0.84
PXMP4-202ENST00000344022 VEGFAP15692 232 aaPredicted RBP20.29■□□□□ 0.84
PXMP4-202ENST00000344022 GRIPAP1Q4V328 841 aa20.29■□□□□ 0.84
PXMP4-202ENST00000344022 SLC10A5Q5PT55 438 aa20.29■□□□□ 0.84
PXMP4-202ENST00000344022 ANKRD13DQ6ZTN6 518 aa20.29■□□□□ 0.84
PXMP4-202ENST00000344022 PLBD2Q8NHP8 589 aa20.29■□□□□ 0.84
PXMP4-202ENST00000344022 CCDC27Q2M243 656 aa20.28■□□□□ 0.84
PXMP4-202ENST00000344022 NLRP10Q86W26 655 aa20.28■□□□□ 0.84
PXMP4-202ENST00000344022 CRAMP1Q96RY5 1269 aa20.28■□□□□ 0.84
PXMP4-202ENST00000344022 FSTL1Q12841 308 aa20.27■□□□□ 0.84
PXMP4-202ENST00000344022 TMX4Q9H1E5 349 aaPredicted RBP20.26■□□□□ 0.83
PXMP4-202ENST00000344022 TRMT112Q9UI30 125 aaKnown RBP20.26■□□□□ 0.83
PXMP4-202ENST00000344022 CEP350Q5VT06 3117 aa20.26■□□□□ 0.83
PXMP4-202ENST00000344022 SH3TC1Q8TE82 1336 aa20.26■□□□□ 0.83
PXMP4-202ENST00000344022 APLP1P51693 650 aa20.25■□□□□ 0.83
PXMP4-202ENST00000344022 PSMD1Q99460 953 aa20.25■□□□□ 0.83
PXMP4-202ENST00000344022 WDR90Q96KV7 1748 aa20.24■□□□□ 0.83
PXMP4-202ENST00000344022 ELL2O00472 640 aaPredicted RBP20.24■□□□□ 0.83
PXMP4-202ENST00000344022 GOLGA2Q08379 1002 aa20.24■□□□□ 0.83
PXMP4-202ENST00000344022 OLFM4Q6UX06 510 aa20.24■□□□□ 0.83
PXMP4-202ENST00000344022 SYNE4Q8N205 404 aa20.24■□□□□ 0.83
PXMP4-202ENST00000344022 SMC1BQ8NDV3 1235 aa20.24■□□□□ 0.83
PXMP4-202ENST00000344022 ZNF277Q9NRM2 450 aaPredicted RBP20.24■□□□□ 0.83
PXMP4-202ENST00000344022 PPEF1O14829 653 aaPredicted RBP20.23■□□□□ 0.83
PXMP4-202ENST00000344022 CCDC30Q5VVM6 783 aa20.23■□□□□ 0.83
PXMP4-202ENST00000344022 C3orf67Q6ZVT6 689 aa20.23■□□□□ 0.83
PXMP4-202ENST00000344022 WWC1Q8IX03 1113 aa20.23■□□□□ 0.83
PXMP4-202ENST00000344022 IARSP41252 1262 aaKnown RBP20.22■□□□□ 0.83
PXMP4-202ENST00000344022 RIC3Q7Z5B4 369 aa20.22■□□□□ 0.83
PXMP4-202ENST00000344022 C8orf58Q8NAV2 365 aa20.22■□□□□ 0.83
PXMP4-202ENST00000344022 ISCA1Q9BUE6 129 aa20.22■□□□□ 0.83
PXMP4-202ENST00000344022 IL16Q14005 1332 aa20.22■□□□□ 0.83
PXMP4-202ENST00000344022 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
PXMP4-202ENST00000344022 BBOX1O75936 387 aa20.2■□□□□ 0.82
PXMP4-202ENST00000344022 DDNO94850 711 aaPredicted RBP20.2■□□□□ 0.82
PXMP4-202ENST00000344022 DDX58O95786 925 aaKnown RBP20.2■□□□□ 0.82
PXMP4-202ENST00000344022 TRIM28Q13263 835 aaKnown RBP20.2■□□□□ 0.82
PXMP4-202ENST00000344022 DDX46Q7L014 1031 aaKnown RBP20.2■□□□□ 0.82
PXMP4-202ENST00000344022 JDP2Q8WYK2 163 aa20.2■□□□□ 0.82
PXMP4-202ENST00000344022 LAMB2P55268 1798 aa20.2■□□□□ 0.82
PXMP4-202ENST00000344022 SNED1Q8TER0 1413 aa20.19■□□□□ 0.82
PXMP4-202ENST00000344022 IQCA1LA6NCM1 817 aa20.19■□□□□ 0.82
PXMP4-202ENST00000344022 ATP5J2-PTCD1G3V325 749 aa20.19■□□□□ 0.82
PXMP4-202ENST00000344022 ATP6V0A2Q9Y487 856 aa20.19■□□□□ 0.82
PXMP4-202ENST00000344022 ABCC4O15439 1325 aa20.19■□□□□ 0.82
PXMP4-202ENST00000344022 POTECB2RU33 542 aa20.18■□□□□ 0.82
PXMP4-202ENST00000344022 TCERG1O14776 1098 aaKnown RBP20.18■□□□□ 0.82
PXMP4-202ENST00000344022 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms